NO05G04320, NO05G04320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04320 vs. NCBI_GenBank
Match: XP_005853916.1 (stromal cell-derived factor 2 [Nannochloropsis gaditana CCMP526] >EKU22443.1 stromal cell-derived factor 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.9 bits (860), Expect = 9.800e-89 Identity = 151/217 (69.59%), Postives = 183/217 (84.33%), Query Frame = 0 Query: 9 AALLIVASLVAVVSAVEDDIMTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQEVSCFGEDGDGDTGDDWEVVCVSAGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFIHPKTDEEGDRDEL 226 AA ++ +LV V ++EDDIMTFGSVVK QH SK+FLHSHQI+WGSGSGQQSVTAH D++GG+WV+ E ++ F+EGG+PVACG +RLGH++T++NLHSHFFSSPLSNQQEVSCFG+ G GD+GD+WEVVC++ G K WRR E+R KHKDTGRFLQTEAKHRF+QKNCPNCPI+GQQEVFCHQT G ET WKA G+FIHP++DE+ DEL Sbjct: 10 AAGWLLLTLVTPVLSLEDDIMTFGSVVKLQHVPSKYFLHSHQISWGSGSGQQSVTAHGSADDRGGLWVVAEGDNDPFKEGGSPVACGTAIRLGHMETSKNLHSHFFSSPLSNQQEVSCFGDGGRGDSGDNWEVVCMAPGAKFWRRGDEVRFKHKDTGRFLQTEAKHRFTQKNCPNCPIVGQQEVFCHQTGGAETVWKAVQGIFIHPRSDEDSGHDEL 226
BLAST of NO05G04320 vs. NCBI_GenBank
Match: EWM27942.1 (cell-derived factor 2 like protein [Nannochloropsis gaditana]) HSP 1 Score: 335.9 bits (860), Expect = 9.800e-89 Identity = 151/217 (69.59%), Postives = 183/217 (84.33%), Query Frame = 0 Query: 9 AALLIVASLVAVVSAVEDDIMTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQEVSCFGEDGDGDTGDDWEVVCVSAGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFIHPKTDEEGDRDEL 226 AA ++ +LV V ++EDDIMTFGSVVK QH SK+FLHSHQI+WGSGSGQQSVTAH D++GG+WV+ E ++ F+EGG+PVACG +RLGH++T++NLHSHFFSSPLSNQQEVSCFG+ G GD+GD+WEVVC++ G K WRR E+R KHKDTGRFLQTEAKHRF+QKNCPNCPI+GQQEVFCHQT G ET WKA G+FIHP++DE+ DEL Sbjct: 40 AAGWLLLTLVTPVLSLEDDIMTFGSVVKLQHVPSKYFLHSHQISWGSGSGQQSVTAHGSADDRGGLWVVAEGDNDPFKEGGSPVACGTAIRLGHMETSKNLHSHFFSSPLSNQQEVSCFGDGGRGDSGDNWEVVCMAPGAKFWRRGDEVRFKHKDTGRFLQTEAKHRFTQKNCPNCPIVGQQEVFCHQTGGAETVWKAVQGIFIHPRSDEDSGHDEL 256
BLAST of NO05G04320 vs. NCBI_GenBank
Match: EWM27941.1 (cell-derived factor 2 like protein [Nannochloropsis gaditana]) HSP 1 Score: 326.2 bits (835), Expect = 7.800e-86 Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQEVSCFGEDGDGDTGDDWEVVCVSAGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFIHPKTDEEGDRDEL 226 MTFGSVVK QH SK+FLHSHQI+WGSGSGQQSVTAH D++GG+WV+ E ++ F+EGG+PVACG +RLGH++T++NLHSHFFSSPLSNQQEVSCFG+ G GD+GD+WEVVC++ G K WRR E+R KHKDTGRFLQTEAKHRF+QKNCPNCPI+GQQEVFCHQT G ET WKA G+FIHP++DE+ DEL Sbjct: 1 MTFGSVVKLQHVPSKYFLHSHQISWGSGSGQQSVTAHGSADDRGGLWVVAEGDNDPFKEGGSPVACGTAIRLGHMETSKNLHSHFFSSPLSNQQEVSCFGDGGRGDSGDNWEVVCMAPGAKFWRRGDEVRFKHKDTGRFLQTEAKHRFTQKNCPNCPIVGQQEVFCHQTGGAETVWKAVQGIFIHPRSDEDSGHDEL 197
BLAST of NO05G04320 vs. NCBI_GenBank
Match: XP_008866498.1 (hypothetical protein H310_04097 [Aphanomyces invadans] >ETW05060.1 hypothetical protein H310_04097 [Aphanomyces invadans]) HSP 1 Score: 179.1 bits (453), Expect = 1.500e-41 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 0 Query: 27 DIMTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQ--EVSCFGEDGDGDTGDDWEVVCVSA-------------GEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 + +T GS +K H S+ LHSH++N+G+GSGQQSVTAH D+ W++KE + S + G + CG+ +RL H+ T RNLHSH FSSPLSN + EVS FG GDGD+GD W V C +A G W RD +RL+H +G++L+T+ RF Q NCP CPI+GQQEV Q+ T W A G+++ Sbjct: 101 EFVTCGSTIKLVHEDSRFRLHSHEVNYGTGSGQQSVTAHGSRDDFNSYWLVKEGDGASPCDLGAKIRCGSTIRLEHVNTRRNLHSHDFSSPLSNGRYAEVSGFGVAGDGDSGDSWIVECENAQQCQATDKDCHSTGVPSWGRDELVRLRHVVSGKYLRTDHAVRFDQSNCPRCPIVGQQEVNAGQSLDDATLWFAGEGIYM 301
BLAST of NO05G04320 vs. NCBI_GenBank
Match: POM71212.1 (Stromal cell-derived factor 2 precursor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 175.3 bits (443), Expect = 2.200e-40 Identity = 87/195 (44.62%), Postives = 115/195 (58.97%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQ-EVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 +T GS +K H SS++ LHSH+I +GSGSGQQSVT H ++ W++KE + S + G P+ CGA +RL H+QT RNLHSH F +PLS+Q EVS FG G+GD D W V C + LW+R +R +H+ T L T +K RF NCPNCPI GQQEV +T W A G+++ Sbjct: 101 VTCGSSIKLVHESSRYRLHSHEIAYGSGSGQQSVTTHMARNDVNSYWLVKEGDGASVCQVGKPIECGATIRLEHMQTRRNLHSHMFKAPLSSQNLEVSGFGVAGEGDRMDSWVVECQENQQCSADGQCEDDGLWKRGELVRFRHRSTNHLLSTSSKARFDDSNCPNCPINGQQEVSASSHRDGDTLWFAGEGIYV 295
BLAST of NO05G04320 vs. NCBI_GenBank
Match: POM72464.1 (Stromal cell-derived factor 2 precursor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 175.3 bits (443), Expect = 2.200e-40 Identity = 87/195 (44.62%), Postives = 115/195 (58.97%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQ-EVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 +T GS +K H SS++ LHSH+I +GSGSGQQSVT H ++ W++KE + S + G P+ CGA +RL H+QT RNLHSH F +PLS+Q EVS FG G+GD D W V C + LW+R +R +H+ T L T +K RF NCPNCPI GQQEV +T W A G+++ Sbjct: 102 VTCGSSIKLVHESSRYRLHSHEIAYGSGSGQQSVTTHMARNDVNSYWLVKEGDGASVCQVGQPIECGATIRLEHMQTRRNLHSHMFKAPLSSQNLEVSGFGVAGEGDRMDSWVVECQENQQCSADGQCEDDGLWKRGELVRFRHRSTNHLLSTSSKARFDDSNCPNCPINGQQEVSASSHRDGDTLWFAGEGIYV 296
BLAST of NO05G04320 vs. NCBI_GenBank
Match: GAX98108.1 (stromal cell-derived factor 2 precursor [Pythium insidiosum]) HSP 1 Score: 174.5 bits (441), Expect = 3.800e-40 Identity = 90/200 (45.00%), Postives = 119/200 (59.50%), Query Frame = 0 Query: 27 DIMTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSN-QQEVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFIHPK 216 + +T GS +K H S+H LHSH+I +GSGSGQQSVTAH ++ W++KE++S GT VACGA +R H T RNLH+H F +PLS+ QQEVS FG G+GD GD+W V C E LW+R +RL+ TGR+L T + RF NCP C I GQQEV +T W A+ G+++ P+ Sbjct: 82 EYVTCGSSIKLVHEPSRHRLHSHEIAYGSGSGQQSVTAHSARNDPNSYWLVKEADSAPACALGTRVACGATIRXEHTPTRRNLHTHAFRAPLSSQQQEVSAFGVAGEGDAGDNWVVECEERQQCSAIDQCEEEGLWKRGELVRLRSVATGRYLLTSHRARFDDSNCPRCXINGQQEVSATAQKDEQTLWFASEGIYVSPQ 281
BLAST of NO05G04320 vs. NCBI_GenBank
Match: XP_002904957.1 (stromal cell-derived factor 2 precursor [Phytophthora infestans T30-4] >EEY53339.1 stromal cell-derived factor 2 precursor [Phytophthora infestans T30-4]) HSP 1 Score: 173.3 bits (438), Expect = 8.400e-40 Identity = 87/195 (44.62%), Postives = 113/195 (57.95%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQ-EVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 +T GS +K H S++ LHSH+I +GSGSGQQSVT H ++ W++KE +S E G P+ CGA +RL H+QT RNLHSH F +PLS+Q EVS FG G+GD D W V C + LW+R +RL+H+ T L T +K RF NCP CPI GQQEV T W A G+++ Sbjct: 101 VTCGSSIKLVHEPSRYRLHSHEITYGSGSGQQSVTTHMARNDVNSYWLVKEGDSAPVCEVGKPIECGATIRLEHMQTRRNLHSHMFKAPLSSQNLEVSAFGVAGEGDRLDSWIVECQENQQCSADGHCEDDGLWKRGELVRLRHRSTNHLLTTSSKSRFDDSNCPRCPINGQQEVSGSSMRDENTLWFAGEGIYV 295
BLAST of NO05G04320 vs. NCBI_GenBank
Match: XP_024576646.1 (RxLR-like protein [Plasmopara halstedii] >CEG40277.1 RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 173.3 bits (438), Expect = 8.400e-40 Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPL-SNQQEVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 +T GS +K H +S++ LHSH+I +GSGSGQQSVTAH ++ W++KE + + G P+ CGA++RL H+QT RNLHSH F +PL S+ EVS FG G+GD D W V C + LW+R +RL+H+ T L T + RF NCPNCPI GQQEV +T W A G+++ Sbjct: 101 VTCGSSIKLVHEASRYRLHSHEITYGSGSGQQSVTAHMARNDVNSYWLVKEGDGAPVCQVGKPIQCGAIIRLEHMQTRRNLHSHMFKAPLTSHHLEVSAFGVAGEGDRMDSWVVECQENQQCSAEGQCEDDGLWKRGELVRLRHRSTNHLLSTSSSIRFDDSNCPNCPINGQQEVSATAMREGDTLWFAAEGIYV 295
BLAST of NO05G04320 vs. NCBI_GenBank
Match: XP_008912333.1 (hypothetical protein PPTG_16542 [Phytophthora parasitica INRA-310] >ETI36935.1 hypothetical protein F443_17038 [Phytophthora parasitica P1569] >ETK77126.1 hypothetical protein L915_16568 [Phytophthora parasitica] >ETL30587.1 hypothetical protein L916_16469 [Phytophthora parasitica] >ETL83816.1 hypothetical protein L917_16295 [Phytophthora parasitica] >ETM37008.1 hypothetical protein L914_16400 [Phytophthora parasitica] >ETN02296.1 hypothetical protein PPTG_16542 [Phytophthora parasitica INRA-310] >KUF97065.1 Stromal cell-derived factor 2 [Phytophthora nicotianae]) HSP 1 Score: 172.6 bits (436), Expect = 1.400e-39 Identity = 86/195 (44.10%), Postives = 114/195 (58.46%), Query Frame = 0 Query: 29 MTFGSVVKFQHSSSKHFLHSHQINWGSGSGQQSVTAHRWEDEQGGMWVIKESNSGSFQEGGTPVACGAVVRLGHLQTARNLHSHFFSSPLSNQQ-EVSCFGEDGDGDTGDDWEVVCVS----------AGEKLWRRDHEIRLKHKDTGRFLQTEAKHRFSQKNCPNCPIIGQQEVFCHQTSGVETAWKATLGVFI 213 +T GS +K H S++ LHSH+I +GSGSGQQSVTAH ++ W++KE + + G P+ CGA +RL H+QT RNLHSH F +PLS+Q EVS FG G+GD D W V C + LW+R +RL+H+ T L T ++ RF NCP CPI GQQEV T T W A G+++ Sbjct: 99 VTCGSSIKLVHEPSRYRLHSHEIAYGSGSGQQSVTAHMARNDVNSYWLVKEGDGAPVCDVGKPIECGATIRLEHMQTRRNLHSHMFKAPLSSQNLEVSAFGVAGEGDRMDSWVVECQENQQCSAEGQCEDDGLWKRGELVRLRHRATNHLLTTSSRSRFDDSNCPRCPINGQQEVSGSSTRDENTLWFAGEGIYV 293 The following BLAST results are available for this feature:
BLAST of NO05G04320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04320 ID=NO05G04320|Name=NO05G04320|organism=Nannochloropsis oceanica|type=gene|length=1298bpback to top protein sequence of NO05G04320.1 >NO05G04320.1-protein ID=NO05G04320.1-protein|Name=NO05G04320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=226bpback to top Synonyms
Publications
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