NO05G04280, NO05G04280 (gene) Nannochloropsis oceanica

Overview
NameNO05G04280
Unique NameNO05G04280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1425
Alignment locationchr5:1100403..1101827 +

Link to JBrowse

Properties
Property NameValue
DescriptionNad-dependent epimerase dehydratase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1100403..1101827 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: EWM28034.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 581.6 bits (1498), Expect = 1.700e-162
Identity = 289/380 (76.05%), Postives = 329/380 (86.58%), Query Frame = 0 
Query:    1 MKVFNSIASRFGRENLEA--NSSVAPKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFLADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAG--GK---WDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARKLPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVPEGN 374
            M VF++I +RFGRE+ +     S   ++ VVVTGATGYIASHIVRVLLE GF VRATVRDPSN  RLKFL+DLPGA++RLTFHKADLLA GSFDEV AGA  VIHTASPVPL++PDDP  A+V PAVEGTKNVF+SI KAG++KRVVLTSSIRAVFGFGNEKP GYVY+EEDWNTTS LENNQ YSLSKTLAEKTAWEYAEKAG  GK   WDLV IQPG+V+GPSLSGRED MS+TLFKNLVTGHQ+GMV+LAWG+VDVRDVA++HVAAL N +A GRYI TSATLSFQEI+DTVR +I R+LPR+AVPKA LW+GYY+G+AGK L+WEDIAYNVGN V+FSN KA K+LL EGFI P KTFGDMY++  + GI+PEGN
Sbjct:   12 MNVFSNIVNRFGRESQDGALTPSTIQRTVVVVTGATGYIASHIVRVLLENGFKVRATVRDPSNKARLKFLSDLPGASERLTFHKADLLAPGSFDEVCAGATCVIHTASPVPLEMPDDPNAAVVVPAVEGTKNVFESILKAGSIKRVVLTSSIRAVFGFGNEKPPGYVYSEEDWNTTSRLENNQAYSLSKTLAEKTAWEYAEKAGKDGKKPEWDLVAIQPGLVFGPSLSGREDSMSLTLFKNLVTGHQSGMVNLAWGVVDVRDVATLHVAALTNTQASGRYIATSATLSFQEIIDTVRAKINRRLPRYAVPKAFLWIGYYSGLAGKQLSWEDIAYNVGNPVLFSNAKATKELLPEGFIEPAKTFGDMYDNLTEVGIIPEGN 391
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: XP_005853917.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526] >EKU22444.1 nad-dependent epimerase dehydratase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 580.1 bits (1494), Expect = 4.900e-162
Identity = 288/380 (75.79%), Postives = 328/380 (86.32%), Query Frame = 0 
Query:    1 MKVFNSIASRFGRENLEA--NSSVAPKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFLADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAG--GK---WDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARKLPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVPEGN 374
            M VF++I +RFGRE+ +     S   ++ VVVTGATGYIASHIVRVLLE GF VRATVRDPSN  RLKFL+DLPGA++RLTFHKADLLA GSFDEV AGA  VIHTASPVPL++PDDP  A+V PAVEGTKNVF+SI KAG++KRVVLTSSIRAVFGFGNEKP GYVY+EEDWNTTS LENNQ YSLSKTLAEKTAWEYAEK G  GK   WDLV IQPG+V+GPSLSGRED MS+TLFKNLVTGHQ+GMV+LAWG+VDVRDVA++HVAAL N +A GRYI TSATLSFQEI+DTVR +I R+LPR+AVPKA LW+GYY+G+AGK L+WEDIAYNVGN V+FSN KA K+LL EGFI P KTFGDMY++  + GI+PEGN
Sbjct:    1 MNVFSNIVNRFGRESQDGALTPSTIQRTVVVVTGATGYIASHIVRVLLENGFKVRATVRDPSNKARLKFLSDLPGASERLTFHKADLLAPGSFDEVCAGATCVIHTASPVPLEMPDDPNAAVVVPAVEGTKNVFESILKAGSIKRVVLTSSIRAVFGFGNEKPPGYVYSEEDWNTTSRLENNQAYSLSKTLAEKTAWEYAEKVGKDGKKPEWDLVAIQPGLVFGPSLSGREDSMSLTLFKNLVTGHQSGMVNLAWGVVDVRDVATLHVAALTNTQASGRYIATSATLSFQEIIDTVRAKINRRLPRYAVPKAFLWIGYYSGLAGKQLSWEDIAYNVGNPVLFSNAKATKELLPEGFIEPAKTFGDMYDNLTEVGIIPEGN 380
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: EWM28483.1 (nad-dependent epimerase dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 370.2 bits (949), Expect = 7.800e-99
Identity = 189/348 (54.31%), Postives = 242/348 (69.54%), Query Frame = 0 
Query:   28 VVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFLADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEK-AGGKWDLVTIQPGVVYGPSLSG-REDGMSMTLFKNLVTGHQTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARKLPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVPEGN 374
            V VTGA GY+  H+V+  LE G+TVR TVRD  +  RL+ L  LPGAT+RL+   A+LL  GSFD+ I GA  V+H+ASPV L+V  DP   ++ PAVEGTKNV  S+ K+ +V+RVVLT S R++FG G+E P GYVYTEEDWN  S+L+NNQGY+LSKTLAE+ AW + E+ A   WD+V + PG+++GP LS    D  S+  FK LVTG +   V L W +VDVRDVA VHV A  +  A+GRY+ TS T S +E+LD VR +I R L R +VPK LLW+G+Y G  GK LA EDI +NVG R++F + K RK+LL EGF AP +TF DMYES  +  I+   N
Sbjct:   24 VTVTGAVGYLGEHLVKTFLEAGYTVRGTVRDVDDIERLQCLKSLPGATERLSLFAANLLVPGSFDKAIEGATYVLHSASPVALEVVADPEGTLIRPAVEGTKNVLTSVHKSTSVRRVVLTGSFRSIFGLGDEHPKGYVYTEEDWNDKSSLDNNQGYALSKTLAERAAWAFVERVAPTSWDMVVLNPGLIFGPLLSRYHPDAFSVQFFKQLVTG-ELPPVKLPWAVVDVRDVAIVHVRAFQHAPARGRYLVTSGTYSLREMLDCVRDKIWRPLLRVSVPKPLLWIGFYTGFVGKRLAKEDIKHNVGFRILFDSSKVRKELLPEGFRAPRQTFRDMYESLQEHKIIGHFN 370
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_083164508.1 (aldehyde reductase [Mycobacterium aquaticum] >ORA35992.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mycobacterium aquaticum])

HSP 1 Score: 260.4 bits (664), Expect = 8.700e-66
Identity = 164/361 (45.43%), Postives = 217/361 (60.11%), Query Frame = 0 
Query:   24 PKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFL----ADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEK--PAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGH-QTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARK-------LPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVP 371
            P +PV+VTGA+GYI S IVR LLE G TV  TVR+P     L+ L    AD P   DRL   KADLL  GSFDE + G   V+HTASP  L    DP  A+V PA+EGT+NV DS+++  +VKRVVLTSS+ A++G   E     G V+T+E WNTTS+++ +Q YS SKT+AE+ AW Y +KA  +WD+VTI PG+V GPSL+   D  S++  K  + G   TG   L  G+VDVRDVA  HV A   P+A GRYI  + +L+  +I     G+I R+        PR   PKA+  V   A +AG +  + D   NVG  + F N ++R +L L  + A E+T  D ++  L  GI P
Sbjct:    3 PTAPVLVTGASGYIGSWIVRRLLEGGHTVHGTVRNPDKATGLEHLHKLSADFP---DRLRLFKADLLDPGSFDEAMVGCELVMHTASPFILSGFTDPQEALVRPALEGTRNVLDSVNRTPSVKRVVLTSSVVAIYGDARESRDVPGGVFTDEHWNTTSSVD-HQPYSYSKTVAEQEAWRY-QKAQDRWDMVTIHPGLVLGPSLTSASDSASLSTMKQFIDGTLLTGAPALTMGVVDVRDVADAHVLAGFTPEAHGRYIVNADSLTLLQI-----GKILRRGYGPFYPFPRTTAPKAV--VKLVAPLAGLTRKYVDT--NVGYPLAFDNSRSRDELGLT-YRAAEQTITDHFQQMLDDGIAP 348
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: XP_004991084.1 (hypothetical protein PTSG_12676 [Salpingoeca rosetta] >EGD76712.1 hypothetical protein PTSG_12676 [Salpingoeca rosetta])

HSP 1 Score: 258.1 bits (658), Expect = 4.300e-65
Identity = 159/350 (45.43%), Postives = 219/350 (62.57%), Query Frame = 0 
Query:   28 VVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFL---ADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFK-NLVTGHQTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIAR-KLPRFAVPKALLWV-GYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVPE 372
            V VTGA+GYIA+HIV+ LLE G+ VR TVRDPSN  + K L   A+   A DRL   KADLL +GSFDE + G   V+HTASP  L     P    V PAV+GT+NV ++++KA +V+RVVLTSS  AV G+ ++K     +TE+DWN TSTL +   YSLSK  AE+ AW+ AE+   K+ LVTI P  V GP+L+GR D  S+   K  LV G     VD    +VDVRDVA  H+ A+ +PKAQGRYIC++ ++S  EI   +  +    ++P   VPK LL++ G + G     L+W  I++NVG  + F N K ++DL  E F   + +  +M +S ++ G++P+
Sbjct:    5 VCVTGASGYIATHIVQQLLEAGYHVRGTVRDPSNEAKTKVLMAIAEKAQAADRLELVKADLLDEGSFDEAVKGCKYVLHTASPFQLQARGSPEEYFVIPAVKGTENVLNAVAKADSVERVVLTSSCAAVEGYADDKDT--PFTEDDWNRTSTLSDG-AYSLSKRRAEEAAWKMAEQQ-DKYTLVTINPAFVMGPTLTGRNDTASVEFLKVRLVVG--VDGVD-THCLVDVRDVALAHIKAMTSPKAQGRYICSAKSMSVLEIAAAISAKYPNYRVPTRKVPKFLLYLFGPFQG-----LSWSFISHNVGVPLEFDNSKIKRDLDFE-FRDVDTSLVEMVDSMVQHGLIPD 341
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_064948677.1 (aldehyde reductase [Mycobacterium sp. 852013-50091_SCH5140682] >OBC01616.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mycobacterium sp. 852013-50091_SCH5140682])

HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64
Identity = 162/362 (44.75%), Postives = 216/362 (59.67%), Query Frame = 0 
Query:   20 SSVAPKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFLADLPG-ATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEK--PAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGH-QTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARK-------LPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVP 371
            +++   +PV+VTGA+GYI S IVR LLE G  V  TVR+P  T  L+ L  L     DRL   KADLL  GSFDE +AG   V+HTASP  L    D   A+V PA+EGT+NV DS+++  +VKRVVLTSS+ A++G   E     G V+T+E WNTTS++E +Q YS SKT+AE+ AW Y +KA  +WD+VTI PG+V GPSL+   D  S++  K  + G   TG   L  G+VDVRDVA  HV A   P+A GRYI  + +LS  +I     G+I R+        PR   PKA+  V   A +AG +  + D   NVG  + F N ++R +L L  +   E+T  D ++  L  GI P
Sbjct:    2 TTIDATAPVLVTGASGYIGSWIVRRLLEAGHNVHGTVRNPQKTTGLEHLHKLSADHPDRLQLFKADLLDPGSFDEAMAGCELVMHTASPFILSGFSDAQEALVRPALEGTRNVLDSVNRTQSVKRVVLTSSVVAIYGDARESRDVPGGVFTDEHWNTTSSVE-HQPYSYSKTVAEQEAWRY-QKAQDRWDMVTIHPGLVLGPSLTSASDSASLSTMKQFIDGTLLTGAPALTMGVVDVRDVADAHVLAGFTPEAHGRYIVNADSLSLLQI-----GKILRRGYGPLYPFPRTTAPKAV--VKLIAPLAGLTRKYVDT--NVGYPLAFDNSRSRDELGLT-YRPAEETVTDHFQQMLDDGIAP 351
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_076478362.1 (diaminohydroxyphosphoribosylaminopyrimidine deaminase [Williamsia sterculiae] >SIR92627.1 Nucleoside-diphosphate-sugar epimerase [Williamsia sterculiae])

HSP 1 Score: 255.4 bits (651), Expect = 2.800e-64
Identity = 161/358 (44.97%), Postives = 212/358 (59.22%), Query Frame = 0 
Query:   20 SSVAPKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFLADL----PGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQT-GMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIA--RKLPRFAVPKALLWVGYYA-GMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIV 370
            + + P  PV+VTG +GY+AS IVR LLE G TVRATVRDP     L  L  L    PG   RLT H ADLL +GSF   + G   VIHTASP  +   DDP   +V PA+EGT+NV  S+++  +V+RVVLTSSI A++G   +      +T+ DWNTTST +++Q YS SKT+AEK AW     A  +WDLVT+ PG+V+GPSL+      +MT   +   G  T G   L  G+VDVRDVA  H+AA   P A+GRYI TS T+S  ++   +R      R  P   +PKAL+ +G  A GM  K      +  NVG  + F N + R++L +E FIAPE T  D ++  +  G V
Sbjct:    2 TEIDPDVPVLVTGGSGYVASWIVRYLLEDGRTVRATVRDPKKPKGLDHLHKLSDEHPG---RLTLHAADLLDQGSFAAAMDGCQLVIHTASPFLMGKLDDPQEQLVRPALEGTRNVLTSVNQTESVRRVVLTSSIVAIYGDNIDMRGKTCFTDADWNTTST-DSHQEYSYSKTVAEKEAWAMC-GAQDRWDLVTVHPGLVFGPSLTTSSASGTMTTIGHFTDGSMTLGAPALEMGVVDVRDVARTHIAAAFTPTARGRYIATSGTVSLLDMGKILRSAFGKRRSFPNRELPKALVKIGGPATGMTRKF-----VDRNVGWPLRFDNSRTREELGVE-FIAPETTVVDHFQQMIDDGQV 348
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_065137606.1 (aldehyde reductase [Mycobacterium gordonae] >OBR97951.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mycobacterium gordonae] >ODR19701.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mycobacterium gordonae] >ORV74088.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mycobacterium gordonae])

HSP 1 Score: 253.4 bits (646), Expect = 1.100e-63
Identity = 158/356 (44.38%), Postives = 214/356 (60.11%), Query Frame = 0 
Query:   24 PKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFL----ADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEK---PAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQ-TGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIA--RKLPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIV 370
            P +PV+VTGA+GYI S IVR +LE G TV  TVR+P  T  L+ L     D PG   RL   KADLL  GSFDE + G   V+HTASP  +    D   A+V PA+EGT+NV DS+++  +VKRVVLTSS+ A++G   E    P G V+TEE WNTTS+ + +Q Y  SKT+AE+ AW Y ++   +WD+VTI PG+V GPSL+   D  S++  K    G    G  D+A G+VDVRDVA  H+ A   P+A GRYI  +ATL+F +I   +R R       PR   PKA+  V   A + G +  + D   NVG  + F N +++K+L L+ +   E+T  D ++  L  G+V
Sbjct:    3 PAAPVLVTGASGYIGSWIVRTVLEAGHTVHGTVRNPDKTSGLEHLHKLSDDHPG---RLKLFKADLLEPGSFDEAMQGCELVMHTASPFLISGFTDAEEALVRPALEGTRNVLDSVNRTDSVKRVVLTSSVVAIYGDARESRDVPNG-VFTEEHWNTTSSAD-HQPYPYSKTVAEREAWRYQQEQ-ERWDMVTIHPGLVLGPSLTSASDSASLSTMKQFYDGTMLAGAPDMATGVVDVRDVAQAHLLAGFTPEAHGRYIANAATLTFLQIGKILRRRFGPFYAFPRTTAPKAVFKV--IAPVVGITRKFVD--RNVGYPLAFDNSRSQKELGLK-YRPVEETISDHFQQMLDDGLV 347
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_061000267.1 (aldehyde reductase [Mycobacterium mucogenicum])

HSP 1 Score: 251.1 bits (640), Expect = 5.300e-63
Identity = 160/355 (45.07%), Postives = 211/355 (59.44%), Query Frame = 0 
Query:   24 PKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFL----ADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEK--PAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQ-TGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGR--IARKLPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIV 370
            P +PV+VTGA+GYI S IVR LLE G TV  TVR+P     L+ L    AD PG   +LT  KADLL  GSFDE +AG   V+HTASP  L    D   ++V PA+EGT+NV DS+++  +VKRVVLTSS+ A++G   E     G V+TE+ WNTTS+++ +Q YS SKT+AE+ AW+Y +KA  +WDLVTI PG+V GPSL+   D  S+   K    G   TG  +L  G+VDVRDVA  HV A   P+A  RY+  +A+LS  EI   +RG   +    P   VPK    V   A      L  E +  NVG  +VF   +++ +L L  +   E+T  D ++  L  GIV
Sbjct:    3 PDAPVLVTGASGYIGSWIVRYLLEAGHTVHGTVRNPQKPTGLEHLHKLSADHPG---KLTLFKADLLDIGSFDEAMAGCELVMHTASPFLLQGVTDAQESLVRPALEGTRNVLDSVNRTESVKRVVLTSSVVAIYGDARESRDVPGGVFTEDQWNTTSSVD-HQPYSYSKTVAEQEAWKY-QKAQNRWDLVTIHPGLVLGPSLTSASDSASLATMKQFADGTMLTGAPELTSGVVDVRDVADAHVRAGFTPEAHDRYLVNAASLSLLEIGQILRGEFGVLYPFPWLNVPK----VAVKAVAPVLGLTREFVDTNVGYPLVFDASRSQSELGLV-YRPIEQTVIDHFQQMLDDGIV 347
[Close]
BLAST of NO05G04280 vs. NCBI_GenBank
Match: WP_029370260.1 (MULTISPECIES: aldehyde reductase [Mycobacterium] >GAS88158.1 NAD-dependent epimerase/dehydratase [Mycobacterium brisbanense])

HSP 1 Score: 250.8 bits (639), Expect = 6.900e-63
Identity = 162/365 (44.38%), Postives = 217/365 (59.45%), Query Frame = 0 
Query:   20 SSVAPKSPVVVTGATGYIASHIVRVLLEQGFTVRATVRDPSNTGRLKFL----ADLPGATDRLTFHKADLLAKGSFDEVIAGAMSVIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSIRAVFGFGNEK--PAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEKAGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGH-QTGMVDLAWGMVDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARK-------LPRFAVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFIAPEKTFGDMYESFLKAGIVP 371
            +++   +PV+VTGA+GYI S IVR LLE G TV  TVR+P     L+ L    AD PG   RL   KADLL  GSFD+ +AG   V+HTASP  L    D   A+V PA+EGT+NV DS+++  +VKRVVLTSS+ A++G   E     G V+T+E WNTTS+++ +Q YS SKT+AE+ AW Y +KA  +WDLVTI PG+V GPSL+   D  S++  K  + G   TG   L  G+VDVRDVA  HV A   P+A GRYI  + +L+  +I     G+I R+        PR   PKA+  V   A +AG  L  + +  NVG  + F N ++R +L L  +   E T  D ++  L  GI P
Sbjct:    2 TTIDATAPVLVTGASGYIGSWIVRRLLEGGHTVHGTVRNPDKDTGLEHLHKLSADHPG---RLRLFKADLLDPGSFDDAMAGCQLVMHTASPFILSGFTDAQEALVRPALEGTRNVLDSVNRTESVKRVVLTSSVVAIYGDARESRDVPGGVFTDEHWNTTSSVD-HQPYSYSKTVAEQEAWRY-QKAQDRWDLVTIHPGLVLGPSLTSASDSASLSTMKQFIDGTLLTGAPALTMGVVDVRDVADAHVLAGFTPEAHGRYIVNADSLTLLQI-----GKILRRGYGPLYPFPRTTAPKAV--VKLIAPLAG--LTRKYVETNVGYPLAFDNSRSRDELGLT-YRPAEVTVTDHFQQMLDDGIAP 351
The following BLAST results are available for this feature:
BLAST of NO05G04280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28034.11.700e-16276.05nad-dependent epimerase dehydratase [Nannochlorops... [more]
XP_005853917.14.900e-16275.79nad-dependent epimerase dehydratase [Nannochlorops... [more]
EWM28483.17.800e-9954.31nad-dependent epimerase dehydratase [Nannochlorops... [more]
WP_083164508.18.700e-6645.43aldehyde reductase [Mycobacterium aquaticum] >ORA3... [more]
XP_004991084.14.300e-6545.43hypothetical protein PTSG_12676 [Salpingoeca roset... [more]
WP_064948677.11.600e-6444.75aldehyde reductase [Mycobacterium sp. 852013-50091... [more]
WP_076478362.12.800e-6444.97diaminohydroxyphosphoribosylaminopyrimidine deamin... [more]
WP_065137606.11.100e-6344.38aldehyde reductase [Mycobacterium gordonae] >OBR97... [more]
WP_061000267.15.300e-6345.07aldehyde reductase [Mycobacterium mucogenicum][more]
WP_029370260.16.900e-6344.38MULTISPECIES: aldehyde reductase [Mycobacterium] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003431NSK003431Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04280.1NO05G04280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585052gene_3242Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g75gene2587Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04280.1NO05G04280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04280 ID=NO05G04280|Name=NO05G04280|organism=Nannochloropsis oceanica|type=gene|length=1425bp
ATGAAAGTCTTTAACAGCATTGCCAGCCGCTTTGGCCGGGAAAACCTGGA
AGCCAACTCCTCAGTCGCCCCAAAGgtacgtgtgttaagttggtccgtat
gtgagactactatatatatacttatactcgtttccccttcacttagAGCC
CTGTTGTGGTGACGGGTGCCACGGGATACATTGCAAGCCATATCGTCCGA
GTGCTGCTTGAGCAAGGCTTCACAGTGCGGGCGACGGTCCGCGACCCCTC
AAATACCGGGCGTCTCAAGgtaagagaaaagaaaaaatatcacacgcaaa
aatgtgggaaacggtttggacaagaggaatgtccaggaatgtatacacac
attgctatattcttgcaccgaaatataagagaaagggggcctctccacaa
gccgttgtacaggattatctgatgtcttgcagcatgtgtgcaaataaact
gcaatcaacccgctcgcctcacacaacacgatcatcccccaatgacaata
gTTCCTAGCCGACCTTCCTGGGGCCACTGATCGCCTTACCTTTCACAAGG
CCGACTTGCTCGCCAAAGGCTCATTCGATGAGGTAATCGCTGGGGCAATG
TCCGTCATTCACACCGCCTCCCCCGTCCCCTTGGATGTGCCCGATGATCC
TTACACTGCCATTGTGGCTCCTGCGGTGGAAGGGACCAAGAATGTGTTCG
ATTCGATTAGCAAGGCAGGAACGGTGAAGAGGGTGGTGCTAACTTCTTCC
ATTCGGGCGGTGTTTGGCTTCGGGAATGAGAAGCCCGCGGGATACGTGTA
CACGGAAGAGGATTGGAATACCACTTCTACCTTGGAAAACAACCAGGGCT
ACAGTTTGTCGAAGACCCTGGCGGAGAAGACGGCGTGGGAGTACGCGGAA
AAGGCAGGAGGGAAGTGGGATTTGGTGACGATTCAACCGGGGGTGGTGTA
CGGTCCGTCGTTGTCGGGAAGGGAGGATGGGATGAGCATGACGTTATTCA
AGAATCTGGTGACGGGGCATCAGACGGGAATGGTGGACTTGGCCTGGGGT
ATGGTCGATGTTCGAGATGTGGCTTCGGTCCATGTGGCCGCTTTGATGAA
TCCGAAGGCGCAAGGGAGGTACATCTGCACAAGCGCTACCTTGTCGTTTC
AGGAGATTCTCGACACAGTCCGGGGGAGGATTGCGCGAAAATTGCCCAGG
TTTGCAGTGCCGAAGGCTCTGCTGTGGGTAGGTTATTATGCAGGAATGGC
GGGGAAGTCATTGGCGTGGGAAGATATTGCATATAATGTGGGAAATCGGG
TTGTGTTTAGCAATGAGAAGGCGCGGAAGGACTTGTTGCTTGAAGGATTT
ATTGCCCCGGAGAAGACGTTCGGAGATATGTATGAGAGCTTTTTGAAAGC
GGGGATTGTGCCTGAGGGAAACTAA
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protein sequence of NO05G04280.1

>NO05G04280.1-protein ID=NO05G04280.1-protein|Name=NO05G04280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MKVFNSIASRFGRENLEANSSVAPKSPVVVTGATGYIASHIVRVLLEQGF
TVRATVRDPSNTGRLKFLADLPGATDRLTFHKADLLAKGSFDEVIAGAMS
VIHTASPVPLDVPDDPYTAIVAPAVEGTKNVFDSISKAGTVKRVVLTSSI
RAVFGFGNEKPAGYVYTEEDWNTTSTLENNQGYSLSKTLAEKTAWEYAEK
AGGKWDLVTIQPGVVYGPSLSGREDGMSMTLFKNLVTGHQTGMVDLAWGM
VDVRDVASVHVAALMNPKAQGRYICTSATLSFQEILDTVRGRIARKLPRF
AVPKALLWVGYYAGMAGKSLAWEDIAYNVGNRVVFSNEKARKDLLLEGFI
APEKTFGDMYESFLKAGIVPEGN*
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Synonyms
Publications