NO05G04050, NO05G04050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04050 vs. NCBI_GenBank
Match: EWM27994.1 (protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 320.1 bits (819), Expect = 6.500e-84 Identity = 169/252 (67.06%), Postives = 192/252 (76.19%), Query Frame = 0 Query: 8 LSFVISLALLPDVMCMVLPVRS---KPPSAPPPPRVDNAIERFFIRAMARKLATITPDQAPFKP-NPTFDEMALSTMQLLDP--ASDPLIQSAKIARLLEEVTPPFLRFLFRTFGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATVSCCGATVGKTKKKSRSKE 254 LSFVIS + MV+PV+S DNA+ER IRAMA KLA+ITP AP P +PT++EMA STMQLL+P A DPL+ SA+IARLL+E TPPFLRFLF+ FG SR GCEANALVAP FS WLVGP++RVEG V G+ WQSTMLIEECRYLK+VDGCRHACVYLCKVPTQTFF+ SL + VT+TPDF DNSCRMCFGQAPPA L DDPVM A +GVP LAT SCCG V +K SRSK+ Sbjct: 11 LSFVIS------SVSMVVPVKSXXXXXXXXXXXXXXDNAVERLLIRAMATKLASITPHDAPPPPSSPTYEEMARSTMQLLNPVLAPDPLVLSARIARLLDEATPPFLRFLFQNFGASRVGCEANALVAPFFSTWLVGPARRVEGEVNGEAWQSTMLIEECRYLKAVDGCRHACVYLCKVPTQTFFESSLGVPVTLTPDFTDNSCRMCFGQAPPARLADDPVMQAGEGVPSLATTSCCGVAV--EEKGSRSKD 254
BLAST of NO05G04050 vs. NCBI_GenBank
Match: EWM30570.1 (protein of unknown function DUF4033 [Nannochloropsis gaditana] >EWM30571.1 protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 123.6 bits (309), Expect = 9.000e-25 Identity = 73/190 (38.42%), Postives = 102/190 (53.68%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRTF--GGSRFGCEANALVAPLFSQWLVGPSK----RVEGPVKG--DTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPV 223 D+ + +I K+A + +P P + + LS + L ++ + + +L + P +FR G SR CE NA V P+F WLVGP+K + PV G + W +++ IE CRYL+SV C+ ACV +CK+PTQTFF E L M VTMTP+F D SC M FG A P + DPV Sbjct: 144 DDIFAKIWIFLFTGKIAAVVGAPSPRNFIPYEEYVRLSRLLLRGGSTK---AKSAVLSVLRSIAFPGFSSIFRALFPGSSRLACEFNARVTPIFFSWLVGPAKVETSEMLNPVTGARELWSNSVKIERCRYLESVQ-CKGACVSICKLPTQTFFTEDLGMPVTMTPNFEDLSCTMTFGTA-PLPIASDPV 328
BLAST of NO05G04050 vs. NCBI_GenBank
Match: XP_024384448.1 (beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384449.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384450.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384451.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384452.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384453.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >XP_024384454.1 beta-carotene isomerase D27, chloroplastic-like isoform X1 [Physcomitrella patens] >PNR48467.1 hypothetical protein PHYPA_012944 [Physcomitrella patens]) HSP 1 Score: 122.5 bits (306), Expect = 2.000e-24 Identity = 79/224 (35.27%), Postives = 112/224 (50.00%), Query Frame = 0 Query: 18 PDVMCMVLPVRSKPPSAPPPPR------VDNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRTFGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATV 236 PD + MV R PS P P D+ ++ + R+L +T K F E+ M+ PL+Q A R+L PP+L + R F + A L+++WLVGP + E V G +S +LI++CRYL+S C CV LCK+PTQ FF SL + +TMTP+F D SC M +GQ PP S+++DP + PC AT+ Sbjct: 31 PDGVNMV-RCRMAEPSGKPAPMGKKTHYKDSWLDNTILSICMRRLGNVTGVSTTKKGYDGFVELTRKVME----TRSPLLQRASSMRVLHSAIPPWLLKIIRRFLPNNQKTAETFAAATLYAEWLVGPCEVKEVEVNGTMQKSGVLIKKCRYLES-SNCVGMCVNLCKIPTQDFFTNSLGVPLTMTPNFEDMSCEMIYGQTPP-SIEEDPALQQ----PCFATL 243
BLAST of NO05G04050 vs. NCBI_GenBank
Match: XP_024384455.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Physcomitrella patens]) HSP 1 Score: 122.5 bits (306), Expect = 2.000e-24 Identity = 79/224 (35.27%), Postives = 112/224 (50.00%), Query Frame = 0 Query: 18 PDVMCMVLPVRSKPPSAPPPPR------VDNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRTFGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATV 236 PD + MV R PS P P D+ ++ + R+L +T K F E+ M+ PL+Q A R+L PP+L + R F + A L+++WLVGP + E V G +S +LI++CRYL+S C CV LCK+PTQ FF SL + +TMTP+F D SC M +GQ PP S+++DP + PC AT+ Sbjct: 31 PDGVNMV-RCRMAEPSGKPAPMGKKTHYKDSWLDNTILSICMRRLGNVTGVSTTKKGYDGFVELTRKVME----TRSPLLQRASSMRVLHSAIPPWLLKIIRRFLPNNQKTAETFAAATLYAEWLVGPCEVKEVEVNGTMQKSGVLIKKCRYLES-SNCVGMCVNLCKIPTQDFFTNSLGVPLTMTPNFEDMSCEMIYGQTPP-SIEEDPALQQ----PCFATL 243
BLAST of NO05G04050 vs. NCBI_GenBank
Match: AFI78797.1 (putative D27 family protein [Nitella hyalina]) HSP 1 Score: 120.6 bits (301), Expect = 7.600e-24 Identity = 74/212 (34.91%), Postives = 107/212 (50.47%), Query Frame = 0 Query: 29 SKPPSAPPPPRV-----DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRTFGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATV 236 ++P P P + D+ I+R F +RK+A IT +A F F +++ + M P + + LL P R LF ++ E NAL+ F WLVGPSK +E V+G S + IE+CRYL++ GC C+ +CK+PTQ FF + +TM PD+ D SC M FGQAPP ++DP + PC A + Sbjct: 23 AEPLGKPAPMGIKTRYKDSLIDRIFQWLFSRKMAQITGRKAGFNGYDEFVDISRAVMNGRSPKKTQEVVREVLMSLLPPNAPQTFRKLFPP---TQKSAELNALITTYFFAWLVGPSKVIEVEVEGRKQMSGVKIEKCRYLEN-SGCVGMCINMCKLPTQDFFTNDFGLPLTMNPDYEDMSCEMIFGQAPPPP-EEDPALKQ----PCYAAI 225
BLAST of NO05G04050 vs. NCBI_GenBank
Match: EPS62650.1 (hypothetical protein M569_12140, partial [Genlisea aurea]) HSP 1 Score: 118.2 bits (295), Expect = 3.800e-23 Identity = 76/201 (37.81%), Postives = 105/201 (52.24%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFD---EMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFR-TFGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATVSC 238 D E+ F+ ARK+ + A K D E + + + PL Q + +L + PP FR F +R+ E NA + F QWLVGPS+ VE V G +S +LI++CRYL++ GC CV +CK+PTQ FF + +TMTP+F D SC M +GQ PP S+++DP T PCLA SC Sbjct: 8 DGLFEKAFMSLFARKMEKFAGESAT-KAKGLLDYDYESFVHASRRVMVGRSPLQQQQIVREVLLSILPPGAPAQFRKLFPPTRWAAEFNAALTVPFFQWLVGPSQVVEVEVNGVKQKSGVLIKKCRYLET-SGCVGMCVNMCKIPTQDFFTNEFGLPLTMTPNFEDMSCEMKYGQVPP-SIEEDP----TFKQPCLAN-SC 200
BLAST of NO05G04050 vs. NCBI_GenBank
Match: GAQ83133.1 (hypothetical protein KFL_001370030 [Klebsormidium nitens]) HSP 1 Score: 117.1 bits (292), Expect = 8.400e-23 Identity = 69/201 (34.33%), Postives = 103/201 (51.24%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRT-FGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATVSCCGA 241 D I+R + RK+ T+T + F +++ + M+ Q A ++R+L + P L ++ RT F +R E NAL P WLVGP++ VE V G ++ + I++CRYL++ GC CV +CKVPTQ FF + + +TM P+F+D SC M FGQ PP +D PC AT+ A Sbjct: 9 DGLIDRLAMNLFRRKMQTVTGARTKETGYDAFVDVSKALMR----GKSAQEQQAAVSRVLLSLIPRHLPYIIRTFFKPTRLSLELNALFTPSIFSWLVGPAEVVEVEVNGVKQKTGVKIKKCRYLEA-SGCVGMCVNVCKVPTQDFFTKEFGLPLTMNPNFDDMSCEMVFGQVPPPIEEDKAFQ-----QPCFATLCSMAA 199
BLAST of NO05G04050 vs. NCBI_GenBank
Match: WP_015220760.1 (DUF4033 domain-containing protein [Cyanobacterium aponinum] >AFZ55041.1 hypothetical protein Cyan10605_2981 [Cyanobacterium aponinum PCC 10605]) HSP 1 Score: 115.9 bits (289), Expect = 1.900e-22 Identity = 66/186 (35.48%), Postives = 105/186 (56.45%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRT-FGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQSTML-----IEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDD 221 DN +R FI +RK+A ++ K F ++++ M+ + Q +A +L+ + P + FL R F +++ CE+NA A + +WLVG S+ E + + Q T+L I++CRYL++ GC CV +CK+PTQ FF +S + +TMTP+F+D SC M FGQ PPA D++ Sbjct: 11 DNWFDRLFIALFSRKMAKAVGKKSQKKGYEGFVDLSMQIME----GRNSQQQQELVAIVLQSLVPSPVLFLIRNLFSPTKWVCESNAWFATVLFEWLVGESEIREAEIVTEDNQVTILKSGVYIKKCRYLEA-SGCVGMCVNMCKLPTQEFFTKSFGIPLTMTPNFDDFSCEMVFGQVPPAFEDEE 191
BLAST of NO05G04050 vs. NCBI_GenBank
Match: WP_006454034.1 (DUF4033 domain-containing protein [Synechococcus sp. PCC 7335] >EDX84287.1 hypothetical protein S7335_1984 [Synechococcus sp. PCC 7335]) HSP 1 Score: 115.2 bits (287), Expect = 3.200e-22 Identity = 74/213 (34.74%), Postives = 110/213 (51.64%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRT-FGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKG-----DTWQSTMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDDPVMLATDGVPCLATVSCCGATVGKTKK 248 DN ++R FI +RK+A F +++ MQ + Q A +AR+L+ + P + ++ RT F +R C NA A +WLVGP + + VKG + S + I++CRYL+ C CV +CK+PTQTFF E + +TM P+F D SC M FG+ PPA+ D+D VM + CL+ S +VG+ K Sbjct: 9 DNLLDRLFIWLFSRKMANAIGSTTAATGYEGFVDLSKQIMQ----GRNAQEQQAAVARVLQSLVPAPVLWVIRTVFSPTRLVCVLNAWFATQMFEWLVGPCEVAQAEVKGLDGEVRSQPSAVHIKKCRYLEE-SQCVGMCVNMCKLPTQTFFTEKFGIPLTMIPNFEDLSCEMVFGRVPPAA-DEDEVMTQS----CLSECSTGTLSVGRCHK 211
BLAST of NO05G04050 vs. NCBI_GenBank
Match: WP_099435120.1 (DUF4033 domain-containing protein [Cyanobacterium aponinum] >PHV63539.1 hypothetical protein CSQ80_04200 [Cyanobacterium aponinum IPPAS B-1201]) HSP 1 Score: 114.0 bits (284), Expect = 7.100e-22 Identity = 66/186 (35.48%), Postives = 104/186 (55.91%), Query Frame = 0 Query: 41 DNAIERFFIRAMARKLATITPDQAPFKPNPTFDEMALSTMQLLDPASDPLIQSAKIARLLEEVTPPFLRFLFRT-FGGSRFGCEANALVAPLFSQWLVGPSKRVEGPVKGDTWQ-----STMLIEECRYLKSVDGCRHACVYLCKVPTQTFFKESLNMDVTMTPDFNDNSCRMCFGQAPPASLDDD 221 DN +R FI +RK+A ++ K F ++++ M+ + Q +A +L+ + P + FL R F +++ CE+NA A + +WLVG S+ E V + Q S + I++CRYL++ GC CV +CK+PTQ FF +S + +TMTP+F+D SC M FGQ PPA D++ Sbjct: 11 DNWFDRLFIALFSRKMAKAVGKKSQKKGYEGFVDLSMQIME----GRNSQQQQELVAIVLQSLVPSPVLFLIRNLFSPTKWVCESNAWFATVLFEWLVGESEIREAEVVTEDNQVRILKSGVYIKKCRYLEA-SGCVGMCVNMCKLPTQEFFTKSFGIPLTMTPNFDDFSCEMVFGQVPPAFEDEE 191 The following BLAST results are available for this feature:
BLAST of NO05G04050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04050 ID=NO05G04050|Name=NO05G04050|organism=Nannochloropsis oceanica|type=gene|length=1130bpback to top protein sequence of NO05G04050.1 >NO05G04050.1-protein ID=NO05G04050.1-protein|Name=NO05G04050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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