NO05G04040, NO05G04040 (gene) Nannochloropsis oceanica

Overview
NameNO05G04040
Unique NameNO05G04040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length441
Alignment locationchr5:1040967..1041407 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1040967..1041407 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G04040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04040.1NO05G04040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04040.1NO05G04040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04040 ID=NO05G04040|Name=NO05G04040|organism=Nannochloropsis oceanica|type=gene|length=441bp
ATGGATCCGAAGGCTTTACAAAGAGCACAGCTTCAACTTTTAGAGTCTTT
GTGCCGCATCGATAACACCCCGCGATTGTGTGGCGATGCTGGGAATTTGA
TCGACTCGCCGGTGATGGGAGGGAGGGGAGGGGGGAGGATGAGCCTGCTG
GCAACGGGGGAGGAGGCATTGGGGACGGCGTTGTTTCAAATGCATCTGCA
GGGAGCAAGCAGTCGGAGGGTGTTCGATCTGACGGGTAGAAGAGAGAGCG
AGGAAGACGAGGACGACGAGGACGAGGAGGGGGAGGATGGGGAGGAGGAA
GAAGAAGAAAAGGAAGAAAGAGAAGAGGAGGAAGGGAAGACAAGGACGTC
GATGGCCATCGGAAGGAATAATGGAGGTGTCCGCTTTGTCCCTGCATATT
CGCCCATGGCGAATAGTCAGATGTCGCAGTTGAGTGCGTAG
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protein sequence of NO05G04040.1

>NO05G04040.1-protein ID=NO05G04040.1-protein|Name=NO05G04040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=147bp
MDPKALQRAQLQLLESLCRIDNTPRLCGDAGNLIDSPVMGGRGGGRMSLL
ATGEEALGTALFQMHLQGASSRRVFDLTGRRESEEDEDDEDEEGEDGEEE
EEEKEEREEEEGKTRTSMAIGRNNGGVRFVPAYSPMANSQMSQLSA*
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Synonyms
Publications