NO05G04020, NO05G04020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G04020 vs. NCBI_GenBank
Match: EWM27929.1 (hypothetical protein Naga_100008g48 [Nannochloropsis gaditana]) HSP 1 Score: 538.9 bits (1387), Expect = 1.000e-149 Identity = 267/305 (87.54%), Postives = 287/305 (94.10%), Query Frame = 0 Query: 1 MDVFKRALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKKLA 306 MDVFKRALDFNVKG+E+VQVRTA+GGLVTMASA LCFLLLVSEL+++SRVE+VNHMTVDST PSLET +PINFHITFPLV CKDISFDAESTRG+AVV+LA+QDVRKTPAT ESSL+ P+GQTGCTVEGTLFTGKVAGEFRINLGEDVPL LAPMVAV+ KTNYTAHKIHHFSVGERK+ K YPLDGLETIPDGEGHYLYNLRIIPTVEQ LYG+ E N+EFAFQESLHKG RLSPGMTALTL+APGIHFFY+FYPVMVEYTHQRTPFLQFVTQ AVVGGIFTMSNILDSILYQSAR MKK+A Sbjct: 1 MDVFKRALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKKMA 305
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009837957.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV72729.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 134.0 bits (336), Expect = 7.700e-28 Identity = 94/298 (31.54%), Postives = 143/298 (47.99%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQ-SARAM 302 R D KG + +Q +T G ++T+ S + LL +SEL Y+ EVVN M VD+ P + + I ITF C D++ DA +G + L+ ++ P ES GC + GT+ KVAG ++ L++ D ++H +H S G PL+ + +T+ Y Y L I+PT LYG Q Y+++ E S L+ PG+ F Y+F P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y S+R M Sbjct: 6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQ--DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAGV--VSFAHAGSLNMFSF--SDFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTE------YTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 282
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_008868086.1 (hypothetical protein H310_05207 [Aphanomyces invadans] >ETW03857.1 hypothetical protein H310_05207 [Aphanomyces invadans]) HSP 1 Score: 133.7 bits (335), Expect = 1.000e-27 Identity = 92/291 (31.62%), Postives = 140/291 (48.11%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPL-DGLETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILY 296 R D KG E +Q +T G L+T+ S + FLL +SEL Y+ +VVN M VD+ P + + I ITF CKD++ DA +G + LA ++ P ES GC + G + KVAG ++ + L++ +D +H +H S G PL D +++ Y Y + I+PT LYG Q Y+++ E S ++ PG+ F Y+F P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y Sbjct: 6 RQYDVYTKGVEGIQEKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVDTVPQ--DAVMHIEVDITFLHEKCKDVAMDASDVKGNKDL-LADSNITAVPVPSGESE--------GCRLTGFVDVHKVAGV--VSFAHEGSLNMFSF--MDFLEFNASHIVHRLSFGPDIPNMVNPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVTE------YTSEPNEGGVMSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIY 275
BLAST of NO05G04020 vs. NCBI_GenBank
Match: PSS26212.1 (Endoplasmic reticulum-Golgi intermediate compartment protein [Actinidia chinensis var. chinensis]) HSP 1 Score: 131.3 bits (329), Expect = 5.000e-27 Identity = 108/381 (28.35%), Postives = 160/381 (41.99%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGE-------------AVVHLAAQDVRK----TPATD-------------------------------------RESSLKAPQGQT-----------------------GCTVEGTLFTGKVAGEFRINLGEDV---PLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDG-EGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKKLA 306 R+LD K E RT GG++T+ S+ + LL SEL Y + VD+ S + INF +TFP +PC +S DA GE H DVR+ P + RE+ K G T GC + G+L KVAG F G+ +HL ++A S +HKI+ + GE PLDG++ + + G Y Y ++++PT+ + G + ++ +F+ E K L + P +PG+HFFYD P+ V +T T FL FVT + A++GGIFT++ I+DS +Y RA+KK A Sbjct: 9 RSLDAYPKVNEDFYSRTLSGGVITLVSSIVILLLFFSELRLYVHKATETTLIVDT---SRGETLRINFDVTFPAIPCSLLSLDAMDISGEQHRDIRHDIFKKRIDSHGNIIDVRQEGIGAPQIEKPLQRHGGRLEQNEKYCGSCFGAEMSDDECCNSCEEVREAYRKKGWGMTNPDLIDQCKREGFVQKIKDEEGEGCNIHGSLDVSKVAGTFHFTPGKSFHQSSIHLHELLAFQSDIYNISHKINKLAFGEYFPGVVNPLDGVQWVQEAPNGIYQYFIKVVPTIYTDIRGRTIRSNQFSVTEHF-KSLEIGPSQ-----LSPGVHFFYDLSPIKVTFTEGHTSFLHFVTHLCAIIGGIFTVAGIVDSFVYHGRRAIKKKA 380
BLAST of NO05G04020 vs. NCBI_GenBank
Match: OQR92923.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Achlya hypogyna]) HSP 1 Score: 129.8 bits (325), Expect = 1.400e-26 Identity = 91/294 (30.95%), Postives = 140/294 (47.62%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSA 299 R D KG E +Q RT G ++T+ S + FLLL+SEL Y+ EVVN M VD P +T + + ITF PC D++ DA T+G V + DV P D GC G + K AG+ IN + L++ ++ ++H +H G PL+ + + + + Y Y + I+PT LYG S Y+++ E + P + PG+ F Y+F P+ VEY + FLQF+T A+VGG+F ++ I+D +++ A Sbjct: 6 RQYDVYTKGVEGIQERTTGGAIITLVSMVIVFLLLLSELGIYTTTEVVNRMYVDIDPQ--DTVMHVEVDITFLHEPCSDVAMDASDTKGNRDV-IVKSDVIAYPMED---------SNEGCRFTGYVDVQKTAGD--INFAHEGALNM--FTFLEFLDFNSSHIVHSLRFGPTVPNMVNPLENVHKAVIENFKIYKYGISIVPTQYTPLYGPSVHTYQYSVTEHASE-----PNENG-RFSFPGVVFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARIVDGLVHSVA 277
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009837956.1 (hypothetical protein H257_12449 [Aphanomyces astaci] >ETV72728.1 hypothetical protein H257_12449 [Aphanomyces astaci]) HSP 1 Score: 129.4 bits (324), Expect = 1.900e-26 Identity = 95/316 (30.06%), Postives = 143/316 (45.25%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYL-------------------YNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQ-SARAM 302 R D KG + +Q +T G ++T+ S + LL +SEL Y+ EVVN M VD+ P + + I ITF C D++ DA +G + L+ ++ P ES GC + GT+ KVAG ++ L++ D ++H +H S G PL+ + + G YL Y L I+PT LYG Q Y+++ E S L+ PG+ F Y+F P+ VEY + FLQFVT A+VGG+F ++ I+DS++Y S+R M Sbjct: 6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQ--DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAGV--VSFAHAGSLNMFSF--SDFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTE------YTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 300
BLAST of NO05G04020 vs. NCBI_GenBank
Match: OQS06780.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Thraustotheca clavata]) HSP 1 Score: 128.6 bits (322), Expect = 3.200e-26 Identity = 89/291 (30.58%), Postives = 138/291 (47.42%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILY 296 R D KG E +Q RT G ++T+ S + LL +SEL Y+ EV N M VD P +T + + ITF PC D++ DA T+G V + DV P D + GC +G + K+AG+ IN + L++ ++ ++H +H G PL+ + + + + Y Y + I+PT LYG+ Q Y+++ E S + PG+ F Y+F P+ VEY + FLQF+T A+VGG+F ++ ILD +Y Sbjct: 6 RQYDVYTKGVEGIQERTTGGAIITLTSLVVVLLLFLSELGIYTTTEVANRMYVDVDPQ--DTVMHVEVDITFLHEPCSDVAMDASDTKGNREV-IVQSDVVAYPLEDEKE---------GCRFKGFVDLKKIAGD--INFAHEGSLNM--FTFLEFLDFNSSHIVHSLRFGPSIPNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYSVTE------HASDPNENGRFSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVY 274
BLAST of NO05G04020 vs. NCBI_GenBank
Match: KFD55269.1 (hypothetical protein M513_03910 [Trichuris suis] >KFD65934.1 hypothetical protein M514_03910 [Trichuris suis]) HSP 1 Score: 128.3 bits (321), Expect = 4.200e-26 Identity = 111/364 (30.49%), Postives = 159/364 (43.68%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDA------------ESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQ----------------------------------------------------TGCTVEGTLFTGKVAGEFRINLG---EDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYL-YNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAM 302 R D K E +VRT GG VT+ SA L +L VSEL +Y E+V + VD+T + + INF I FP + C+ IS DA ES +A+V A V T+ ++ P G GC V G L KVAG F I G +D+ H+ + AV K+ T+H + HFS G K YPLDG I + G + Y ++I+PTV Y E++ Q S+ K R TA + PG Y+F P+MV+ +H+ PF F+ +V A++GG+FT+++ILDS Y+ + + Sbjct: 10 RRFDAYSKPLEDCRVRTLSGGAVTVVSAILMVVLFVSELKSYLSAEIVEELFVDTTVG--DERLKINFDILFPALDCQFISVDAMDIAGQLQSNVTESVWKDAIVESQA-TVNAKAVTEASTASANPCGSCYGAETELTKCCNTCDDVKRAYLLKGWVIGELDQIVQCRDEEWVRKLRTSRGIGCRVHGWLEVSKVAGNFHIAPGSTVKDLHSHVHNLHAVGPKSFNTSHIVRHFSFGTPYPGKQYPLDGQNAITESGGVMVHYFVKIVPTV----YVDLEKDRILTHQFSVTKHQRTVG--TADSTGLPGFFVSYEFSPLMVQLSHRDKPFAHFIAKVCALIGGLFTVASILDSCFYKMSNLL 364
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009595173.1 (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 127.1 bits (318), Expect = 9.400e-26 Identity = 105/370 (28.38%), Postives = 155/370 (41.89%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRK-----------------TPATDRE---------------------------------------------------SSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVP---LHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLE-TIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKK 304 R LD K E RT GG++T+AS+ + LL +SEL Y + VD+ S + INF ITFP +PC +S DA GE + + ++K P DR +KA +G+ GC + G L KVAG F G+ +H+ ++ + +HKI+ + GE PLDG+ T G Y Y ++++PTV + G + Q+ +F+ E KG + + PG+ FFYD P+ V +T Q FL F+T V A+VGG+FT+S ILDS +Y +A+KK Sbjct: 9 RNLDAYPKINEDFYSRTLSGGVITLASSIIMTLLFISELRLYLHAVTETKLVVDT---SRGETLRINFDITFPALPCSILSVDAMDISGEQHLDIRHDIIKKRIDVHGNVIETRKEGIGAPKIDRPLQKHGGRLEHNETYCGSCYGAEGSDDEAYRKKGWALSNPDIIDQCKREGFLEMIKAEEGE-GCNMYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLTFQKDSYNISHKINRLTYGEYFPGVVNPLDGVTWTQETPHGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHF-KGADVGRFQ-----SIPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKK 368
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_008605101.1 (hypothetical protein SDRG_01358 [Saprolegnia diclina VS20] >EQC41387.1 hypothetical protein SDRG_01358 [Saprolegnia diclina VS20]) HSP 1 Score: 126.3 bits (316), Expect = 1.600e-25 Identity = 90/294 (30.61%), Postives = 138/294 (46.94%), Query Frame = 0 Query: 6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSA 299 R D KG E +Q RT G ++T+ S + LL +SEL Y+ EVVN M VD P +T + + ITF PC D++ DA T+G V + DV P + E GC G + K AG+ IN + L++ ++ ++H +H G PL+ + + + + Y Y + I+PT LYG S Q Y+++ E S + PG+ F Y+F P+ VEY + LQF+T A+VGG+F ++ ILD +++ A Sbjct: 6 RQYDVYTKGVEGIQERTTSGAIITLVSLVVVLLLFLSELGIYTTTEVVNRMYVDIDPQ--DTIMHVEVDITFLHEPCTDVAMDASDTKGNREV-IVKSDVIAYPLENSEE---------GCRFTGYVDVQKTAGD--INFAHEGSLNM--FTFLEFLDFNSSHIVHSLRFGPSIPEMINPLENVHKVVVENFKIYKYGISIVPTQYTPLYGPSVQTYQYSVTE------HASDPNENGRFSFPGVVFSYEFSPIKVEYIETKPSLLQFLTSTCAIVGGVFAVARILDGLVHSVA 277 The following BLAST results are available for this feature:
BLAST of NO05G04020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04020 ID=NO05G04020|Name=NO05G04020|organism=Nannochloropsis oceanica|type=gene|length=918bpback to top protein sequence of NO05G04020.1 >NO05G04020.1-protein ID=NO05G04020.1-protein|Name=NO05G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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