NO05G04020, NO05G04020 (gene) Nannochloropsis oceanica

Overview
NameNO05G04020
Unique NameNO05G04020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length918
Alignment locationchr5:1037174..1038091 -

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Properties
Property NameValue
DescriptionEndoplasmic reticulum-Golgi intermediate compartment protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1037174..1038091 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012936Erv_C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO05G04020 vs. NCBI_GenBank
Match: EWM27929.1 (hypothetical protein Naga_100008g48 [Nannochloropsis gaditana])

HSP 1 Score: 538.9 bits (1387), Expect = 1.000e-149
Identity = 267/305 (87.54%), Postives = 287/305 (94.10%), Query Frame = 0
Query:    1 MDVFKRALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKKLA 306
            MDVFKRALDFNVKG+E+VQVRTA+GGLVTMASA LCFLLLVSEL+++SRVE+VNHMTVDST PSLET +PINFHITFPLV CKDISFDAESTRG+AVV+LA+QDVRKTPAT  ESSL+ P+GQTGCTVEGTLFTGKVAGEFRINLGEDVPL LAPMVAV+ KTNYTAHKIHHFSVGERK+ K YPLDGLETIPDGEGHYLYNLRIIPTVEQ LYG+ E N+EFAFQESLHKG RLSPGMTALTL+APGIHFFY+FYPVMVEYTHQRTPFLQFVTQ  AVVGGIFTMSNILDSILYQSAR MKK+A
Sbjct:    1 MDVFKRALDFNVKGSESVQVRTAMGGLVTMASAGLCFLLLVSELLSFSRVEIVNHMTVDSTAPSLETTIPINFHITFPLVKCKDISFDAESTRGDAVVYLASQDVRKTPATGVESSLRPPEGQTGCTVEGTLFTGKVAGEFRINLGEDVPLQLAPMVAVEFKTNYTAHKIHHFSVGERKENKIYPLDGLETIPDGEGHYLYNLRIIPTVEQPLYGSPEHNFEFAFQESLHKGTRLSPGMTALTLSAPGIHFFYEFYPVMVEYTHQRTPFLQFVTQALAVVGGIFTMSNILDSILYQSARVMKKMA 305          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009837957.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV72729.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 134.0 bits (336), Expect = 7.700e-28
Identity = 94/298 (31.54%), Postives = 143/298 (47.99%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQ-SARAM 302
            R  D   KG + +Q +T  G ++T+ S  +  LL +SEL  Y+  EVVN M VD+ P   +  + I   ITF    C D++ DA   +G   + L+  ++   P    ES         GC + GT+   KVAG   ++      L++      D     ++H +H  S G        PL+ + +T+      Y Y L I+PT    LYG   Q Y+++  E        S       L+ PG+ F Y+F P+ VEY   +  FLQFVT   A+VGG+F ++ I+DS++Y  S+R M
Sbjct:    6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQ--DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAGV--VSFAHAGSLNMFSF--SDFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTE------YTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 282          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_008868086.1 (hypothetical protein H310_05207 [Aphanomyces invadans] >ETW03857.1 hypothetical protein H310_05207 [Aphanomyces invadans])

HSP 1 Score: 133.7 bits (335), Expect = 1.000e-27
Identity = 92/291 (31.62%), Postives = 140/291 (48.11%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPL-DGLETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILY 296
            R  D   KG E +Q +T  G L+T+ S  + FLL +SEL  Y+  +VVN M VD+ P   +  + I   ITF    CKD++ DA   +G   + LA  ++   P    ES         GC + G +   KVAG   ++   +  L++     +D      +H +H  S G        PL D  +++      Y Y + I+PT    LYG   Q Y+++  E        S       ++ PG+ F Y+F P+ VEY   +  FLQFVT   A+VGG+F ++ I+DS++Y
Sbjct:    6 RQYDVYTKGVEGIQEKTTCGALITVISVAIVFLLFLSELGIYTTTQVVNRMHVDTVPQ--DAVMHIEVDITFLHEKCKDVAMDASDVKGNKDL-LADSNITAVPVPSGESE--------GCRLTGFVDVHKVAGV--VSFAHEGSLNMFSF--MDFLEFNASHIVHRLSFGPDIPNMVNPLQDVHKSVEKNVALYKYGVSIVPTQYTPLYGPPIQTYQYSVTE------YTSEPNEGGVMSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSVIY 275          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: PSS26212.1 (Endoplasmic reticulum-Golgi intermediate compartment protein [Actinidia chinensis var. chinensis])

HSP 1 Score: 131.3 bits (329), Expect = 5.000e-27
Identity = 108/381 (28.35%), Postives = 160/381 (41.99%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGE-------------AVVHLAAQDVRK----TPATD-------------------------------------RESSLKAPQGQT-----------------------GCTVEGTLFTGKVAGEFRINLGEDV---PLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDG-EGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKKLA 306
            R+LD   K  E    RT  GG++T+ S+ +  LL  SEL  Y        + VD+   S    + INF +TFP +PC  +S DA    GE                H    DVR+     P  +                                     RE+  K   G T                       GC + G+L   KVAG F    G+      +HL  ++A  S     +HKI+  + GE       PLDG++ + +   G Y Y ++++PT+   + G + ++ +F+  E   K L + P        +PG+HFFYD  P+ V +T   T FL FVT + A++GGIFT++ I+DS +Y   RA+KK A
Sbjct:    9 RSLDAYPKVNEDFYSRTLSGGVITLVSSIVILLLFFSELRLYVHKATETTLIVDT---SRGETLRINFDVTFPAIPCSLLSLDAMDISGEQHRDIRHDIFKKRIDSHGNIIDVRQEGIGAPQIEKPLQRHGGRLEQNEKYCGSCFGAEMSDDECCNSCEEVREAYRKKGWGMTNPDLIDQCKREGFVQKIKDEEGEGCNIHGSLDVSKVAGTFHFTPGKSFHQSSIHLHELLAFQSDIYNISHKINKLAFGEYFPGVVNPLDGVQWVQEAPNGIYQYFIKVVPTIYTDIRGRTIRSNQFSVTEHF-KSLEIGPSQ-----LSPGVHFFYDLSPIKVTFTEGHTSFLHFVTHLCAIIGGIFTVAGIVDSFVYHGRRAIKKKA 380          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: OQR92923.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Achlya hypogyna])

HSP 1 Score: 129.8 bits (325), Expect = 1.400e-26
Identity = 91/294 (30.95%), Postives = 140/294 (47.62%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSA 299
            R  D   KG E +Q RT  G ++T+ S  + FLLL+SEL  Y+  EVVN M VD  P   +T + +   ITF   PC D++ DA  T+G   V +   DV   P  D            GC   G +   K AG+  IN   +  L++     ++     ++H +H    G        PL+ + + + +    Y Y + I+PT    LYG S   Y+++  E   +     P       + PG+ F Y+F P+ VEY   +  FLQF+T   A+VGG+F ++ I+D +++  A
Sbjct:    6 RQYDVYTKGVEGIQERTTGGAIITLVSMVIVFLLLLSELGIYTTTEVVNRMYVDIDPQ--DTVMHVEVDITFLHEPCSDVAMDASDTKGNRDV-IVKSDVIAYPMED---------SNEGCRFTGYVDVQKTAGD--INFAHEGALNM--FTFLEFLDFNSSHIVHSLRFGPTVPNMVNPLENVHKAVIENFKIYKYGISIVPTQYTPLYGPSVHTYQYSVTEHASE-----PNENG-RFSFPGVVFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARIVDGLVHSVA 277          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009837956.1 (hypothetical protein H257_12449 [Aphanomyces astaci] >ETV72728.1 hypothetical protein H257_12449 [Aphanomyces astaci])

HSP 1 Score: 129.4 bits (324), Expect = 1.900e-26
Identity = 95/316 (30.06%), Postives = 143/316 (45.25%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYL-------------------YNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQ-SARAM 302
            R  D   KG + +Q +T  G ++T+ S  +  LL +SEL  Y+  EVVN M VD+ P   +  + I   ITF    C D++ DA   +G   + L+  ++   P    ES         GC + GT+   KVAG   ++      L++      D     ++H +H  S G        PL+ +    +  G YL                   Y L I+PT    LYG   Q Y+++  E        S       L+ PG+ F Y+F P+ VEY   +  FLQFVT   A+VGG+F ++ I+DS++Y  S+R M
Sbjct:    6 RQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQ--DAVMRIEVDITFLHEKCADVAMDASDIKGNKDL-LSDSNIAAVPVVSDESE--------GCRLTGTVDVHKVAGV--VSFAHAGSLNMFSF--SDFLEFNSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVTE------YTSEPSEEGALSFPGVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKM 300          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: OQS06780.1 (endoplasmic reticulum-Golgi intermediate compartment protein [Thraustotheca clavata])

HSP 1 Score: 128.6 bits (322), Expect = 3.200e-26
Identity = 89/291 (30.58%), Postives = 138/291 (47.42%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILY 296
            R  D   KG E +Q RT  G ++T+ S  +  LL +SEL  Y+  EV N M VD  P   +T + +   ITF   PC D++ DA  T+G   V +   DV   P  D +          GC  +G +   K+AG+  IN   +  L++     ++     ++H +H    G        PL+ + + + +    Y Y + I+PT    LYG+  Q Y+++  E        S        + PG+ F Y+F P+ VEY   +  FLQF+T   A+VGG+F ++ ILD  +Y
Sbjct:    6 RQYDVYTKGVEGIQERTTGGAIITLTSLVVVLLLFLSELGIYTTTEVANRMYVDVDPQ--DTVMHVEVDITFLHEPCSDVAMDASDTKGNREV-IVQSDVVAYPLEDEKE---------GCRFKGFVDLKKIAGD--INFAHEGSLNM--FTFLEFLDFNSSHIVHSLRFGPSIPNMVNPLENVHKVVIENFKLYKYRISIVPTQYTPLYGSPVQTYQYSVTE------HASDPNENGRFSFPGVAFSYEFSPIKVEYIETKPSFLQFLTSTCAIVGGVFAVARILDGFVY 274          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: KFD55269.1 (hypothetical protein M513_03910 [Trichuris suis] >KFD65934.1 hypothetical protein M514_03910 [Trichuris suis])

HSP 1 Score: 128.3 bits (321), Expect = 4.200e-26
Identity = 111/364 (30.49%), Postives = 159/364 (43.68%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDA------------ESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQ----------------------------------------------------TGCTVEGTLFTGKVAGEFRINLG---EDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYL-YNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAM 302
            R  D   K  E  +VRT  GG VT+ SA L  +L VSEL +Y   E+V  + VD+T    +  + INF I FP + C+ IS DA            ES   +A+V   A  V     T+  ++   P G                                                      GC V G L   KVAG F I  G   +D+  H+  + AV  K+  T+H + HFS G     K YPLDG   I +  G  + Y ++I+PTV    Y   E++     Q S+ K  R     TA +   PG    Y+F P+MV+ +H+  PF  F+ +V A++GG+FT+++ILDS  Y+ +  +
Sbjct:   10 RRFDAYSKPLEDCRVRTLSGGAVTVVSAILMVVLFVSELKSYLSAEIVEELFVDTTVG--DERLKINFDILFPALDCQFISVDAMDIAGQLQSNVTESVWKDAIVESQA-TVNAKAVTEASTASANPCGSCYGAETELTKCCNTCDDVKRAYLLKGWVIGELDQIVQCRDEEWVRKLRTSRGIGCRVHGWLEVSKVAGNFHIAPGSTVKDLHSHVHNLHAVGPKSFNTSHIVRHFSFGTPYPGKQYPLDGQNAITESGGVMVHYFVKIVPTV----YVDLEKDRILTHQFSVTKHQRTVG--TADSTGLPGFFVSYEFSPLMVQLSHRDKPFAHFIAKVCALIGGLFTVASILDSCFYKMSNLL 364          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_009595173.1 (PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 127.1 bits (318), Expect = 9.400e-26
Identity = 105/370 (28.38%), Postives = 155/370 (41.89%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRK-----------------TPATDRE---------------------------------------------------SSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVP---LHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLE-TIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARAMKK 304
            R LD   K  E    RT  GG++T+AS+ +  LL +SEL  Y        + VD+   S    + INF ITFP +PC  +S DA    GE  + +    ++K                  P  DR                                                      +KA +G+ GC + G L   KVAG F    G+      +H+  ++     +   +HKI+  + GE       PLDG+  T     G Y Y ++++PTV   + G + Q+ +F+  E   KG  +         + PG+ FFYD  P+ V +T Q   FL F+T V A+VGG+FT+S ILDS +Y   +A+KK
Sbjct:    9 RNLDAYPKINEDFYSRTLSGGVITLASSIIMTLLFISELRLYLHAVTETKLVVDT---SRGETLRINFDITFPALPCSILSVDAMDISGEQHLDIRHDIIKKRIDVHGNVIETRKEGIGAPKIDRPLQKHGGRLEHNETYCGSCYGAEGSDDEAYRKKGWALSNPDIIDQCKREGFLEMIKAEEGE-GCNMYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLTFQKDSYNISHKINRLTYGEYFPGVVNPLDGVTWTQETPHGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHF-KGADVGRFQ-----SIPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFTVSGILDSFIYHGQKAIKK 368          
BLAST of NO05G04020 vs. NCBI_GenBank
Match: XP_008605101.1 (hypothetical protein SDRG_01358 [Saprolegnia diclina VS20] >EQC41387.1 hypothetical protein SDRG_01358 [Saprolegnia diclina VS20])

HSP 1 Score: 126.3 bits (316), Expect = 1.600e-25
Identity = 90/294 (30.61%), Postives = 138/294 (46.94%), Query Frame = 0
Query:    6 RALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRVEVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHLAAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVPLHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGL-ETIPDGEGHYLYNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIHFFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSA 299
            R  D   KG E +Q RT  G ++T+ S  +  LL +SEL  Y+  EVVN M VD  P   +T + +   ITF   PC D++ DA  T+G   V +   DV   P  + E          GC   G +   K AG+  IN   +  L++     ++     ++H +H    G        PL+ + + + +    Y Y + I+PT    LYG S Q Y+++  E        S        + PG+ F Y+F P+ VEY   +   LQF+T   A+VGG+F ++ ILD +++  A
Sbjct:    6 RQYDVYTKGVEGIQERTTSGAIITLVSLVVVLLLFLSELGIYTTTEVVNRMYVDIDPQ--DTIMHVEVDITFLHEPCTDVAMDASDTKGNREV-IVKSDVIAYPLENSEE---------GCRFTGYVDVQKTAGD--INFAHEGSLNM--FTFLEFLDFNSSHIVHSLRFGPSIPEMINPLENVHKVVVENFKIYKYGISIVPTQYTPLYGPSVQTYQYSVTE------HASDPNENGRFSFPGVVFSYEFSPIKVEYIETKPSLLQFLTSTCAIVGGVFAVARILDGLVHSVA 277          
The following BLAST results are available for this feature:
BLAST of NO05G04020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27929.11.000e-14987.54hypothetical protein Naga_100008g48 [Nannochlorops... [more]
XP_009837957.17.700e-2831.54hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_008868086.11.000e-2731.62hypothetical protein H310_05207 [Aphanomyces invad... [more]
PSS26212.15.000e-2728.35Endoplasmic reticulum-Golgi intermediate compartme... [more]
OQR92923.11.400e-2630.95endoplasmic reticulum-Golgi intermediate compartme... [more]
XP_009837956.11.900e-2630.06hypothetical protein H257_12449 [Aphanomyces astac... [more]
OQS06780.13.200e-2630.58endoplasmic reticulum-Golgi intermediate compartme... [more]
KFD55269.14.200e-2630.49hypothetical protein M513_03910 [Trichuris suis] >... [more]
XP_009595173.19.400e-2628.38PREDICTED: endoplasmic reticulum-Golgi intermediat... [more]
XP_008605101.11.600e-2530.61hypothetical protein SDRG_01358 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003458NSK003458Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04020.1NO05G04020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584942gene_3211Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g48gene2562Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04020.1NO05G04020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04020 ID=NO05G04020|Name=NO05G04020|organism=Nannochloropsis oceanica|type=gene|length=918bp
ATGGACGTCTTCAAGCGAGCCTTGGACTTCAACGTCAAGGGCACGGAAAC
CGTGCAAGTGCGGACGGCGGTGGGCGGCCTGGTAACCATGGCGAGCGCAT
GTCTGTGCTTCCTGCTCCTCGTCTCGGAATTGGTGGCCTACTCGCGGGTC
GAGGTCGTAAATCACATGACCGTCGACTCCACCCCGCCTTCCCTGGAGAC
GGCTGTGCCGATAAACTTCCACATTACCTTTCCCTTGGTTCCATGCAAAG
ATATTAGCTTCGATGCGGAGTCCACACGGGGCGAAGCCGTCGTGCATCTT
GCAGCCCAGGACGTTCGCAAGACCCCTGCGACGGACCGCGAATCGAGCTT
GAAAGCCCCTCAAGGCCAAACAGGCTGCACCGTGGAAGGTACCCTGTTTA
CGGGCAAGGTTGCGGGGGAATTTCGGATTAATTTGGGAGAAGACGTGCCT
TTGCATTTGGCACCTATGGTGGCAGTGGATAGCAAGACGAATTACACAGC
CCACAAAATCCACCACTTCTCCGTCGGAGAGCGGAAAGACCGCAAGTCCT
ATCCCTTGGACGGCCTAGAGACTATTCCTGACGGGGAAGGACATTATTTG
TACAATCTCCGGATTATCCCCACGGTGGAACAGTTTCTATATGGCACGTC
GGAGCAGAATTACGAGTTCGCGTTCCAAGAATCGTTGCACAAGGGATTAC
GCCTTTCACCGGGCATGACAGCGTTGACACTGACGGCACCAGGAATCCAT
TTCTTTTATGATTTTTATCCGGTCATGGTGGAGTATACGCATCAGCGGAC
GCCGTTTTTGCAGTTTGTGACCCAGGTGTTTGCGGTCGTTGGGGGTATTT
TTACCATGTCGAATATCTTGGACTCGATTTTGTACCAGTCGGCGAGGGCG
ATGAAGAAGCTGGCTTAG
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protein sequence of NO05G04020.1

>NO05G04020.1-protein ID=NO05G04020.1-protein|Name=NO05G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MDVFKRALDFNVKGTETVQVRTAVGGLVTMASACLCFLLLVSELVAYSRV
EVVNHMTVDSTPPSLETAVPINFHITFPLVPCKDISFDAESTRGEAVVHL
AAQDVRKTPATDRESSLKAPQGQTGCTVEGTLFTGKVAGEFRINLGEDVP
LHLAPMVAVDSKTNYTAHKIHHFSVGERKDRKSYPLDGLETIPDGEGHYL
YNLRIIPTVEQFLYGTSEQNYEFAFQESLHKGLRLSPGMTALTLTAPGIH
FFYDFYPVMVEYTHQRTPFLQFVTQVFAVVGGIFTMSNILDSILYQSARA
MKKLA*
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Synonyms
Publications