NO05G03980, NO05G03980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03980 vs. NCBI_GenBank
Match: EWM28037.1 (Arv1 protein [Nannochloropsis gaditana]) HSP 1 Score: 368.2 bits (944), Expect = 2.400e-98 Identity = 193/296 (65.20%), Postives = 228/296 (77.03%), Query Frame = 0 Query: 34 AAVTVHGGDGYSLCIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQWPQLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMVEWKIV----------------------VTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVANLISLLVLSSQWQALRTVVSAAMAQRER---RKEKESIKGWRVEMDAAALPFVVGLICKIMLRLAAFRVDGSCTNLYLV 305 A VT+HG DG SLCIECG+ EGLY+EYSKDNIRLSRC+ CGAVADRL+EYEL+LVGLDLALHRLPAWRHILFNRQPHAKL++ QL+RMA+V L+DTHIKYA+YVHYSS++ PP+H+D T+TP YQ++LLLRILLLSF+EH VF G++ + W + VTRKLVQ LL+P FGR IV+FVMVWDPA VVANLISLLVL SQWQALR VV+AA+A ER +++++S+K VE AAALPFVVGL CK +LRL AF VD SCTNLYLV Sbjct: 33 ALVTIHGDDGCSLCIECGKPVTEGLYREYSKDNIRLSRCEFCGAVADRLIEYELVLVGLDLALHRLPAWRHILFNRQPHAKLEFAQLWRMALVLTLVDTHIKYAIYVHYSSIS-----PPNHLDLTDTPKYQLSLLLRILLLSFVEHFVFFGIIVFLTTWMLAVRLHLCRPQLRGPASTPYTRTFVTRKLVQALLFPNFGRCIVIFVMVWDPAFVVANLISLLVLLSQWQALRAVVAAAIALNERYNQQRKEDSVKRGNVEFYAAALPFVVGLSCKCLLRLVAFHVDASCTNLYLV 323
BLAST of NO05G03980 vs. NCBI_GenBank
Match: OBZ89490.1 (Protein arv1 [Choanephora cucurbitarum]) HSP 1 Score: 100.9 bits (250), Expect = 7.200e-18 Identity = 62/213 (29.11%), Postives = 121/213 (56.81%), Query Frame = 0 Query: 45 SLCIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAK----LQWPQLFRMAIVTVLIDTHIK-YAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMV--EWKIVVTRKLVQGLLYPTFGRLIVVFVMVWD-PAIVVANLISLLVLSSQWQALRTVVSA 250 S C+ECGQ + LY +YSKDNIRL+ CD+C AD+ VE++ +++ +D+ LH+ +RH+LFNR + P +FR AI+ VL + +IK + + +Y++ Q P + YQ +L + ++ F+ + ++T + + + + + L+ +FG+++++ +++WD + A L++++VL+S +AL ++A Sbjct: 2 STCVECGQ-PVANLYTQYSKDNIRLTTCDRCNQFADKYVEHDFVIIFIDMLLHKPQVYRHLLFNRISKQDGVEVMSDPHVFRFAILLVLFEVYIKWFRLEQYYTAYGTQFIQQPLY--------YQYLYILTLCIIEFIAFHCCVNMMTRLYLGKQENLKHNYVSMALIISSFGKMLLILMVIWDYRQLEYAWLVNIIVLASNTEALSVYLNA 205
BLAST of NO05G03980 vs. NCBI_GenBank
Match: KFH62378.1 (hypothetical protein MVEG_11587 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 95.9 bits (237), Expect = 2.300e-16 Identity = 69/262 (26.34%), Postives = 131/262 (50.00%), Query Frame = 0 Query: 47 CIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQW-PQLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFI----GVVTCMVEW-----KIVVTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVAN--LISLLVLSSQWQALRTVVSAAMAQRERRKEKESIKGWRVEMDAAALPFVVGLICKIMLRLAAFRVDG 297 C+ECG + + LY EYSK NIRL+ C+ C +AD+ VE++ +++ +D+ LH+ P +RH+LFNR P+ L P ++++ I+ +L D +IK+ + V N+ Q AL+ + L + FL + F+ GV + W I+ + L+ +FG+++++ +++WD + + L++ +V +S +AL + A L V G++C+I++++A + G Sbjct: 4 CVECG-AAVSSLYTEYSKGNIRLTYCEHCNKLADKYVEHDFVIIFVDMILHKKPVYRHLLFNRLPYRDLGIDPNVYKLGILLILFDVYIKW-------------FKLEQEVTMINSGFAQHALVFQYLYILFLCIIEFLSFHFGVRLIISLWYGGRYAILKYNYITTTLIISSFGKMLLILMVIWDYTELEHSWLLVNFIVFTSNIEALSVFLDAGYF-------------------PTTLVIVFGIMCRILMQIAFTGITG 232
BLAST of NO05G03980 vs. NCBI_GenBank
Match: CDH56847.1 (arv1-like family protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 95.5 bits (236), Expect = 3.000e-16 Identity = 63/210 (30.00%), Postives = 115/210 (54.76%), Query Frame = 0 Query: 47 CIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQ-WPQLFRMAIVTVLIDTHIK-YAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMVEWKIVVTRK----------LVQGLLYPTFGRLIVVFVMVWD-PAIVVANLISLLVLSSQWQAL 244 C+ECG S + LY +YSKDNIRL+ CD+C AD+ +E++ +++ +D+ LH+ +RH+LFNR A + P + R AI+ +L + ++K + + +++ T Q P H YQ + IL L +E V F V + ++ + + L+ +FG+++++ +++WD + + L+SL+VL+S +AL Sbjct: 4 CVECGAS-VRNLYTQYSKDNIRLTSCDQCNEFADKYIEHDFVIIFIDMLLHKPQVYRHLLFNRISQAGNRIEPHVTRFAILLILFEVYMKWFRLETYHADYETTFVQHPLH--------YQ---YMYILTLCIIEFVAFHCCVRLAIRLYLIYQQPSSPKQIRYNYVSMALIISSFGKMLLILMVIWDYKQLEYSWLVSLIVLASNAEAL 201
BLAST of NO05G03980 vs. NCBI_GenBank
Match: XP_021885224.1 (Arv1 protein [Lobosporangium transversale] >ORZ27497.1 Arv1 protein [Lobosporangium transversale]) HSP 1 Score: 95.5 bits (236), Expect = 3.000e-16 Identity = 68/260 (26.15%), Postives = 126/260 (48.46%), Query Frame = 0 Query: 46 LCIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQW-PQLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMV------EWKIVVTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVA--NLISLLVLSSQWQALRTVVSAAMAQRERRKEKESIKGWRVEMDAAALPFVVGLICKIMLRLAAFRVDG 297 +C+ECG + + LY EYSK NIRL+ C+ C +AD+ VE++ +++ +D+ LH+ P +RH+LFNR P+ L P +F++ ++ +L D +IK+ Q VD V L IL L +E + F V +V + I+ + L+ +FG+++++ +++WD + +L++ +V +S +AL + Q L V G+ C+I++++ + G Sbjct: 3 ICVECG-AAVSSLYTEYSKGNIRLTYCEHCKKLADKYVEHDFVIIFVDMVLHKKPVYRHLLFNRLPYRDLGIDPNVFKLGVLLILFDVYIKW----------FRLEQEAVVVDADFAQHALVFQYLYILFLCIIEFLSFHFGVRLIVSLCYGGRYAILKYNYITTALIISSFGKMLLILMVIWDYTELEHSWHLVNFIVFTSNIEALSVFLDTGYLQ-------------------TTLVIVFGIACRILMQIVFTNITG 232
BLAST of NO05G03980 vs. NCBI_GenBank
Match: OAQ32371.1 (Arv1-like protein [Mortierella elongata AG-77]) HSP 1 Score: 94.7 bits (234), Expect = 5.100e-16 Identity = 62/256 (24.22%), Postives = 129/256 (50.39%), Query Frame = 0 Query: 47 CIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQW-PQLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCM---VEWKIVVTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVA--NLISLLVLSSQWQALRTVVSAAMAQRERRKEKESIKGWRVEMDAAALPFVVGLICKIMLRLAAFRVDG 297 C+ECG + + LY EYSK NIRL+ C+ C +AD+ VE++ +++ +D+ LH+ P +RH+LFNR P+ L P +F++ ++ +L D VY+ + L T+ + +Q +L + ++ FL + ++ + + I+ + L+ +FG+++++ +++WD + +L++ +V +S +AL + Q L V G++C++++++A + G Sbjct: 4 CVECG-AAVSSLYTEYSKGNIRLTYCEHCKKLADKYVEHDFVIIFVDMILHKKPVYRHLLFNRLPYRDLGIDPNVFKLGVLLILFD------VYIKWFRLEQERTEIEVVGFSQHALVFQYLYILFLCIIEFLAFHFGVRLIVSLWYGGRYAILKYNYITTTLIISSFGKMLLILMVIWDYTELEHSWHLVNFIVFTSNVEALSVFLETGYVQ-------------------TTLVIVFGVLCRVLMQIAFASITG 233
BLAST of NO05G03980 vs. NCBI_GenBank
Match: CEG64665.1 (hypothetical protein RMATCC62417_01599 [Rhizopus microsporus] >CEJ03185.1 hypothetical protein RMCBS344292_17173 [Rhizopus microsporus]) HSP 1 Score: 94.4 bits (233), Expect = 6.700e-16 Identity = 57/203 (28.08%), Postives = 115/203 (56.65%), Query Frame = 0 Query: 47 CIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQWPQLFRMAIVTVLIDTHIK-YAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSF-LEHVVFIGVVTCMVEW---KIVVTRKLVQGLLYPTFGRLIVVFVMVWD-PAIVVANLISLLVLSSQWQAL 244 C+ECG S ++ L+ +YSKDNIRL+ C++C AD+ +E++ +++ +D+ LH+ +RHILFNR P +FR AI+ +L + +IK + + H + + P ++Q +L + ++ F + H+V ++ W K + + L+ +FG+++++ +++WD + + L+S++V++S +AL Sbjct: 4 CVECGAS-VKNLFTQYSKDNIRLTTCEQCNQFADKYIEHDFVVIFIDMLLHKPQVYRHILFNRITEQDRVEPHVFRFAILLILFEVYIKWFRLERHCTEYDTRFIEQPL--------SFQYLYILALCIMEFAMFHLVIHLIIWLSCLWKQEKRIRYNYVSMALIISSFGKMLLILMVIWDYKQLEYSWLVSIIVMASNIEAL 197
BLAST of NO05G03980 vs. NCBI_GenBank
Match: GAN06086.1 (conserved hypothetical protein [Mucor ambiguus]) HSP 1 Score: 94.4 bits (233), Expect = 6.700e-16 Identity = 61/208 (29.33%), Postives = 116/208 (55.77%), Query Frame = 0 Query: 45 SLCIECGQSTIEGLYKEYSKDNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQWPQLFRMAIVTVLIDTHIK-YAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLL-SFLEHVVFIGVVTCMV------EWKIVVTRKLVQGLLYPTFGRLIVVFVMVWD-PAIVVANLISLLVLSSQWQAL 244 S C+ECG S + LY +YSKDNIRL+ CD+C AD+ +E++ +++ +D+ LH+ +RH+LFNR P +FR AI+ +L + +IK + + +Y+ + P + YQ +L + + + + VVF V ++ + K + + L+ +FG+++++ +++WD + + L+S++VL+S +AL Sbjct: 2 STCVECGASVV-NLYTQYSKDNIRLTTCDQCNNFADKYIEHDFVIIFIDMLLHKPQVYRHLLFNRITEQDGVEPHVFRFAILLILFEVYIKWFRLERYYTDYDTKFIEQPLY--------YQYLYILTLCIFGNPRQFVVFHCCVNSVIRVYFRNQNKRIRHNYVSMALIISSFGKMLLILMVIWDYKQLEYSWLVSIIVLASNTEAL 200
BLAST of NO05G03980 vs. NCBI_GenBank
Match: XP_003292452.1 (hypothetical protein DICPUDRAFT_157173 [Dictyostelium purpureum] >EGC31014.1 hypothetical protein DICPUDRAFT_157173 [Dictyostelium purpureum]) HSP 1 Score: 94.0 bits (232), Expect = 8.800e-16 Identity = 66/215 (30.70%), Postives = 113/215 (52.56%), Query Frame = 0 Query: 46 LCIECGQSTIEGLYKEYSK---DNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQWP-QLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPSHVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMV------EWKIVVTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVANLISLLVLSSQWQALRTVVSAA 251 +CIECG+ + +YKE+ K NIRL+RC C +AD+ VEY+ I+V LDL LH+ A+RH+LFNRQP+ P Q ++ IV + +++IK+ + Y P ++D + Y I L + E ++I + V + I+ LV ++ +FG+ +V +M+WD +++++ VLSS A++ + + Sbjct: 2 ICIECGR-PVNDVYKEFGKAGSGNIRLTRCSCCQQIADKYVEYDFIIVFLDLFLHKAQAYRHLLFNRQPYRDFGIPIQYVKVLIVYIFFESYIKWLRFKEYGQ--HQPGVPFYYIDWHDDVPYDRYWF--IFLTAIAEFGMYISSIIVAVRFIYQSRYPIIKYNYLVMAIILSSFGKGFLVLMMIWDYPFSFGSILNIFVLSSNVVAIKVFLDTS 211
BLAST of NO05G03980 vs. NCBI_GenBank
Match: XP_635839.1 (hypothetical protein DDB_G0290221 [Dictyostelium discoideum AX4] >Q54GD9.1 RecName: Full=Protein arv1 homolog >EAL62332.1 hypothetical protein DDB_G0290221 [Dictyostelium discoideum AX4]) HSP 1 Score: 93.6 bits (231), Expect = 1.100e-15 Identity = 66/214 (30.84%), Postives = 112/214 (52.34%), Query Frame = 0 Query: 46 LCIECGQSTIEGLYKEYSK---DNIRLSRCDKCGAVADRLVEYELILVGLDLALHRLPAWRHILFNRQPHAKLQWP-QLFRMAIVTVLIDTHIKYAVYVHYSSLAATSTQPPS-----HVDPTNTPTYQVALLLRILLLSFLEHVVFIGVVTCMV------EWKIVVTRKLVQGLLYPTFGRLIVVFVMVWDPAIVVANLISLLVLSSQWQALR 245 +CIECG+ + +YKE+ K NIRL+RC C AD+ VEY+ I+V LDL LH+ A+RH+LFNRQP+ P Q ++ +V + +++IK+ + Y Q PS ++D + Y I + + E V+I + V + I+ L+ ++ +FG+ +V +M+WD +++++ VLSS A++ Sbjct: 2 ICIECGR-PVNDVYKEFGKAGSGNIRLTRCASCNQTADKYVEYDFIIVFLDLFLHKAQAYRHLLFNRQPYRDFGIPIQYIKVLVVYIFFESYIKWLRFKEYE-------QHPSGPAFYYIDWQDDVPYDRYWF--IFVTAIAEFAVYILSIILSVRFIYESRYPIIKYNYLIMAIILSSFGKGFLVLMMIWDYPFSFGSILNIFVLSSNVVAIK 205 The following BLAST results are available for this feature:
BLAST of NO05G03980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03980 ID=NO05G03980|Name=NO05G03980|organism=Nannochloropsis oceanica|type=gene|length=1371bpback to top protein sequence of NO05G03980.1 >NO05G03980.1-protein ID=NO05G03980.1-protein|Name=NO05G03980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=305bpback to top Synonyms
Publications
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