NO05G03970, NO05G03970 (gene) Nannochloropsis oceanica

Overview
NameNO05G03970
Unique NameNO05G03970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3599
Alignment locationchr5:1027980..1031578 -

Link to JBrowse

Properties
Property NameValue
DescriptionCytochrome c oxidase assembly protein cox15-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1027980..1031578 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006784heme a biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: INTERPRO
TermDefinition
IPR023754HemeA_Synthase_type2
IPR003780COX15/CtaA_fam
Homology
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BLAST of NO05G03970 vs. NCBI_GenBank
Match: EWM27976.1 (cytochrome c oxidase assembly protein cox15-like protein [Nannochloropsis gaditana])

HSP 1 Score: 640.6 bits (1651), Expect = 3.900e-180
Identity = 350/459 (76.25%), Postives = 378/459 (82.35%), Query Frame = 0 
Query:    1 MLRLGGLMAPVALRRSVQSTICVASRSSRSPLLQKPRRHIATTTL---PPEHQSFARXXXXXXXXXXXXXXXXXXXVRPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLEMDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAA---SPQASQQLLQRVSRVRNLGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKLPAGSAQQ 454
            MLR+ G++AP A+RR       +A   SRSP+LQ PRR +A+TT     P   S A            XXXXX   +RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWR+QGSLPPLN+ EW AEF RYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYG+P  YFA RGRIPRSLYPRL  LFALGGGQGLIGWWMVKSGLEMDPQQRKEIRVSPYRL AHLGMAFTTFSLLIWTG+DL HPPE A RAA  L+ +L AAA    PQASQ+LL RV RVR+LGIASA LL  TI+SGAFVAGNDAG AYN FPKM    WI PEV+E    EPKWRN FENTALVQLDHR+LALSTAGLI AT +AARRGQVW +LP+ET+TALTATVGMAGAQVALGISTLL+YVPVPLAAAHQAGSLVLL+LLSWSVHS+KFLKKLP  S Q+
Sbjct:    1 MLRVRGMIAPAAIRRGP-----LAGFWSRSPVLQ-PRRRLASTTFADASPLASSSA-----------TXXXXXSTSLRPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRVQGSLPPLNETEWQAEFARYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGLPFAYFAVRGRIPRSLYPRLATLFALGGGQGLIGWWMVKSGLEMDPQQRKEIRVSPYRLTAHLGMAFTTFSLLIWTGMDLFHPPEHAVRAATALKTQLAAAARTGGPQASQELLTRVLRVRHLGIASAGLLGVTILSGAFVAGNDAGRAYNTFPKMGEDFWIPPEVWE---MEPKWRNFFENTALVQLDHRVLALSTAGLISATFLAARRGQVWRVLPAETRTALTATVGMAGAQVALGISTLLMYVPVPLAAAHQAGSLVLLSLLSWSVHSLKFLKKLPVQSVQR 439
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BLAST of NO05G03970 vs. NCBI_GenBank
Match: CBJ26867.1 (COX15 homolog, cytochrome c oxidase assembly protein [Ectocarpus siliculosus])

HSP 1 Score: 379.8 bits (974), Expect = 1.300e-101
Identity = 208/370 (56.22%), Postives = 249/370 (67.30%), Query Frame = 0 
Query:   91 MVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE---MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRNLGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARR------GQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKLPAGSA 452
            MVTVGGITR+TKSGLSMTDW++QGSLPP ++AEW AEF RYK FPE+QQR+SMTLDEFK IF+WE+ HRM+GR +G+ YGVPL+YF  RGRIP  +  R+  LFALGG QGL+GWWMVKSGLE    D    KEIRVSPYRLAAHL  AF TFSLL+ TG   L  P  AS +AA    RLL A   +    L     RV  +G+  AA +  T VSGAFVAGNDAG  YN FPKM    W+  E+     F P WRN FEN+A VQ DHR LALST G        ARR      G +W+ LP+  + A TAT G+  AQ +LGI+TLL   P+PLAA+HQAG+L +L    W+ HS++F +  P+  A
Sbjct:    1 MVTVGGITRMTKSGLSMTDWKVQGSLPPSSEAEWEAEFDRYKAFPEWQQRRSMTLDEFKHIFFWEYAHRMLGRALGVIYGVPLLYFGLRGRIPAHIRGRVAGLFALGGAQGLVGWWMVKSGLEDRSADLAVGKEIRVSPYRLAAHLATAFATFSLLVHTGFQALDGPRTASPSAADAARRLLDAGVMRQGSNL-----RVMAMGVCGAAFV--TAVSGAFVAGNDAGRCYNCFPKMTEEDWLPEEILA---FRPMWRNFFENSATVQADHRALALSTTGAALGMFWYARRGAGGGTGALWAALPAAPRAATTATAGLVTAQASLGITTLLQCAPLPLAASHQAGALTVLASSMWAAHSLRFARVPPSAVA 360
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: XP_002909262.1 (cytochrome oxidase assembly protein, putative [Phytophthora infestans T30-4] >EEY58076.1 cytochrome oxidase assembly protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 379.4 bits (973), Expect = 1.600e-101
Identity = 197/377 (52.25%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPEYQQR++MT+++FK IF+WE+GHRM+GR +GL Y  PL+YF  R R+PR LY R G LF+LG  QG +GWWMV+SGLE       Q+R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG A+N FPK M   WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   87 RPVAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFEIYKQFPEYQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLIYFMLRKRLPRELYTRFGVLFSLGAAQGAVGWWMVRSGLEEHGHEQLQKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRATMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAFNTFPK-MDEQWIPDDLFV---LEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRQHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 446
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: POM58349.1 (Cytochrome oxidase assembly protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 379.0 bits (972), Expect = 2.100e-101
Identity = 200/377 (53.05%), Postives = 254/377 (67.37%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW  +F  YKQFPEYQQRQ+MT+++FK IF+WE+GHRM+GR +GL Y  PL+YF  R R+P+ LY R   LF LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HL  AFTT  +L WTG +L+ PP +    AA+ +E +        S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M   WI  ++F     EPK++N FEN  LVQLDHR+LALST    G     ARR  +WS LP +++ AL   +  AG QV LGI+TLL  VP+PL  AHQ G++VL+T   WS H++ F K L
Sbjct:  845 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWQVQFEIYKQFPEYQQRQNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLIYFMLRKRLPKELYTRFAVLFGLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLAFAFTTLGVLTWTGFNLVAPPSR----AAITREMI--------SPDVLKQVTRIRKILGHVSTA-LGYTIISGAFVAGIDAGMAYNTFPK-MDGQWIPDDLFV---IEPKYKNFFENVPLVQLDHRILALSTLAGFGGVYTMARRQHIWSQLPQQSRNALNMALVAAGGQVTLGITTLLNCVPIPLGIAHQCGAIVLMTATLWSQHTLNFAKPL 1204
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BLAST of NO05G03970 vs. NCBI_GenBank
Match: XP_024575052.1 (cytochrome oxidase assembly [Plasmopara halstedii] >CEG38683.1 cytochrome oxidase assembly [Plasmopara halstedii])

HSP 1 Score: 377.9 bits (969), Expect = 4.800e-101
Identity = 203/377 (53.85%), Postives = 254/377 (67.37%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+A W+ GT ALV GM+ VGG TRLT+SGLSM  W+  GSLPP+   EW  +F  YK+FPEYQQR++MT+DEFK IF+WE+GHRM+GR IG+ Y  PL+YF  R R+PR LY R G LF LG  QG IGWWMV+SGLE       ++R E+RVSPYRLA HL  AFTT  +L+WTG  L+ PP +    AAV ++ +L          + ++V+R+R  LG  S A L  TIVSGAFVAG DAG AYN FPK M   WI  ++F     EPK+RN FEN  LVQLDHR+LALST    G     ARR  +WS LP +++ AL   +  AG QV LGI+TL+ YVP+PLA +HQ G++VL+T   WS H++ F K L
Sbjct:   79 RPIACWIFGTAALVGGMIAVGGATRLTRSGLSMVQWKPHGSLPPMTPEEWDVQFEIYKKFPEYQQRKNMTVDEFKSIFWWEYGHRMLGRTIGIVYTAPLLYFMLRRRLPRELYKRFGVLFGLGATQGAIGWWMVRSGLEEHGHEQLEKRNEVRVSPYRLATHLAFAFTTLGVLLWTGFTLVAPPSR----AAVTRDIIL--------PDVRKKVARIRRILGHVSTA-LGYTIVSGAFVAGIDAGMAYNTFPK-MDEQWIPNDLFV---LEPKYRNFFENVPLVQLDHRILALSTLAGFGTVYGMARRQPIWSQLPQQSRNALNMALAAAGGQVMLGITTLINYVPIPLAISHQCGAIVLVTATLWSQHTLNFAKPL 438
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: XP_008901236.1 (hypothetical protein PPTG_08081 [Phytophthora parasitica INRA-310] >ETI52963.1 hypothetical protein F443_04033 [Phytophthora parasitica P1569] >ETK92815.1 hypothetical protein L915_03918 [Phytophthora parasitica] >ETL99378.1 hypothetical protein L917_03776 [Phytophthora parasitica] >ETM52531.1 hypothetical protein L914_03881 [Phytophthora parasitica] >ETN13163.1 hypothetical protein PPTG_08081 [Phytophthora parasitica INRA-310] >ETP22756.1 hypothetical protein F441_04015 [Phytophthora parasitica CJ01A1] >ETP50748.1 hypothetical protein F442_04019 [Phytophthora parasitica P10297])

HSP 1 Score: 375.6 bits (963), Expect = 2.400e-100
Identity = 196/377 (51.99%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPE+QQR++MT+++FK IF+WE+GHRM+GR +GL Y  PLVYF  R R+PR LY R   LF+LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M + WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   87 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFDIYKQFPEFQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLVYFMLRKRLPRELYTRFAVLFSLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRAAMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAYNTFPK-MDNQWIPDDLFV---IEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRKHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 446
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: XP_008901237.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI52964.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK92816.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL99379.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM52532.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN13164.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETP22757.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP50749.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 375.6 bits (963), Expect = 2.400e-100
Identity = 196/377 (51.99%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPE+QQR++MT+++FK IF+WE+GHRM+GR +GL Y  PLVYF  R R+PR LY R   LF+LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M + WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   54 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFDIYKQFPEFQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLVYFMLRKRLPRELYTRFAVLFSLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRAAMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAYNTFPK-MDNQWIPDDLFV---IEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRKHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 413
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: ETL46235.1 (hypothetical protein L916_03862 [Phytophthora parasitica])

HSP 1 Score: 375.6 bits (963), Expect = 2.400e-100
Identity = 196/377 (51.99%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPE+QQR++MT+++FK IF+WE+GHRM+GR +GL Y  PLVYF  R R+PR LY R   LF+LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M + WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   87 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFDIYKQFPEFQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLVYFMLRKRLPRELYARFAVLFSLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRAAMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAYNTFPK-MDNQWIPDDLFV---IEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRKHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 446
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: ETL46236.1 (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 375.6 bits (963), Expect = 2.400e-100
Identity = 196/377 (51.99%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPE+QQR++MT+++FK IF+WE+GHRM+GR +GL Y  PLVYF  R R+PR LY R   LF+LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M + WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   54 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFDIYKQFPEFQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLVYFMLRKRLPRELYARFAVLFSLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRAAMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAYNTFPK-MDNQWIPDDLFV---IEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRKHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 413
[Close]
BLAST of NO05G03970 vs. NCBI_GenBank
Match: ETO81650.1 (hypothetical protein F444_04092 [Phytophthora parasitica P1976])

HSP 1 Score: 375.6 bits (963), Expect = 2.400e-100
Identity = 196/377 (51.99%), Postives = 255/377 (67.64%), Query Frame = 0 
Query:   75 RPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLE----MDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRN-LGIASAALLATTIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKL 447
            RP+AYW+ GT A+V GM+ VGG TRLT+SGLSM  W+ QGSLPP+   EW A+F  YKQFPE+QQR++MT+++FK IF+WE+GHRM+GR +GL Y  PLVYF  R R+PR LY R   LF+LG  QG +GWWMV+SGLE       ++R E+RVSPYRLA HLG AFTT  +L+WTG +L+ PP +A+    ++            S  +L++V+R+R  LG  S A L  TI+SGAFVAG DAG AYN FPK M + WI  ++F     EPK++N FEN  LVQLDHR+LALST          ARR  +W+ LP +++ AL   +G A  QV LGI+TL+  VP+PL  AHQ G++ L+T   WS H++ F K L
Sbjct:   87 RPIAYWIFGTAAMVGGMIAVGGATRLTRSGLSMVQWKPQGSLPPMTPEEWEAQFEIYKQFPEFQQRKNMTVEDFKGIFWWEYGHRMLGRTVGLVYTAPLVYFMLRKRLPRELYTRFAVLFSLGAAQGGVGWWMVRSGLEEHGHEQLKKRNEVRVSPYRLATHLGFAFTTLGVLLWTGFNLVAPPSRAAMTREMI------------SPDVLKQVTRIRKILGHVSTA-LGYTILSGAFVAGIDAGMAYNTFPK-MDNQWIPDDLFV---IEPKYKNFFENVPLVQLDHRVLALSTLTGFTGVYAMARRKHIWNQLPQQSRNALNMALGAASGQVLLGITTLINCVPIPLGIAHQCGAIALMTATLWSQHTLNFAKPL 446
The following BLAST results are available for this feature:
BLAST of NO05G03970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27976.13.900e-18076.25cytochrome c oxidase assembly protein cox15-like p... [more]
CBJ26867.11.300e-10156.22COX15 homolog, cytochrome c oxidase assembly prote... [more]
XP_002909262.11.600e-10152.25cytochrome oxidase assembly protein, putative [Phy... [more]
POM58349.12.100e-10153.05Cytochrome oxidase assembly protein [Phytophthora ... [more]
XP_024575052.14.800e-10153.85cytochrome oxidase assembly [Plasmopara halstedii]... [more]
XP_008901236.12.400e-10051.99hypothetical protein PPTG_08081 [Phytophthora para... [more]
XP_008901237.12.400e-10051.99hypothetical protein, variant 1 [Phytophthora para... [more]
ETL46235.12.400e-10051.99hypothetical protein L916_03862 [Phytophthora para... [more]
ETL46236.12.400e-10051.99hypothetical protein, variant 1 [Phytophthora para... [more]
ETO81650.12.400e-10051.99hypothetical protein F444_04092 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003462NSK003462Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03970.1NO05G03970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622988gene_3207Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g44gene2558Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03970.1NO05G03970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03970 ID=NO05G03970|Name=NO05G03970|organism=Nannochloropsis oceanica|type=gene|length=3599bp
CCCCGTTCGTTTTCACTACAATGACATAAGTCGGCCATGCCATTCGTGTT
TATTGATTCTTTCATTTACAATCATTCCACACACTTTACACTAAATACAG
ATTCGTACACGAGCCATCCACACGAAACGCCGCCAGACGCAGCATTATTT
TGCATATCAACCCTACCACAAACGGCAGTGCCGCTGCGTCCATCTCTACC
CTCCAACCTTTTATACTTTCCTTCTCCTTTCTTCTTTCTCTCTGCGCCAT
CGCCGCGGAAACCACAGTTCGAAGCGCTTGCCATTGAGAGGACAGGACGA
GGAGACTTATGAGATTGGCAACGACGATCGCAGGGTCCCAAACCATCACA
AAGACCACGATCAAACGTCCAAATGTCGGGTAAAGAAGGCCTTGCACCAG
CTTCCTTGTAACGACTGAAGAGAAAAAGGAGGAGAATGACCTTGATGCTT
TAGATAGTGATACCTTTGAGGCTGCGGCGGCGGGGGAGGGTGTCGTGACA
GAGAAAAGGGGTGACGAGGGCAAGGAAGGCGCATGAATTGGTGACCATGA
CAGTCGTAGGGCACCTATTTTCCACTCAACCATGCAAGTCACAACCCCGA
TAAATACCACATGCTCGAGAAAGGAAAGGAGGAGGATGCGGAGAAGAAGG
GCGACTTGGTAGGTGGGTGTGTTGGTGGGGTCGACGTGGCTGGGAGGCTG
TGTGCTGGTGGCAGCGAGGGAGGAGTAGTGAACATAGACTGCGTACTTGA
TGTGGGTGTCGATCAAGACTGTGACGATCGCCATGCGGAAGAGCTTCATC
GATTTGTTGATTGTTGGGTAGGGTGGGAAGTAGGGAAGACAGGAGAAATG
AATGCAGAAAGGAAACTTTGACATGTCTCTGTTTTGTCACACTTTTGACA
TGTAAATAGTAGAGCTGGCCATATTTCAAGCCATCAGATCGGTGGGCGTC
CTCCTACATTTTCGCCCGCTCCATCGACTAAAACTGCCGGCGGTCACTTT
CACACACATACCTGGGGCCATTGCAACTTGGCATGGGGTTGTCGATTGAA
GAGAATGTGTCGCCAGGCCGGCAAGCGATGCAACGCCAGATCTAGGCCTA
CTAAAATGAGTTCGTACTCCACCAGACGGTCCGCTACGGCGCCGCATTTG
TCCTGGATGAATGAGTGATGGGCATGACAACTGCGTGAGGAAAAGAGGCC
GAAAGGTAGATGAGACGACAAAGGACCAGGTATCACGTACGCATCTCGAG
AGCCTTATATTGTCCTTGGAGTACTCCTTGTACAGGCCCTCGATGGTGGA
CTGGCCGCACTCGATGCACAAGCTGTAGCCATCCCCGCCGTGGACCGTGA
CTGCTGCGGTGTGAGGAAGGGAAAAGAGAGGGGCAGGGGAGAAGGCTGGT
GGGGCAGCGGCACGACGAGCAGCTTTGGTGGGAGGAAAGACCCCTGGACG
TGGCATATTGCCGAACAGCTTTCAGAACCTCGTGATCCTGCCAGTGAATG
GGGCGTGCGATAAGAAGGGTGAGGTCATGGCTAGCGGCATGTTCGCTTGG
CGAAACAAGGACACCAGCAATGTCAACAAGGAGCATCGCTATGTTAGAAA
TATTTACTAGTATATGTCATCTGATCATACCCCAACCAAGAACTCCTGTA
CAACAGCTCAACACCTACGACGACTCGAAGCTCGAGCGTGTAAAGGATAC
TGCGGCGGAGAAGTTAATCCTTTCTATTGCTTGTTGATCCCTCTGATCTG
AGACCTCTGCCGCCACCTCAGTCATCCACTCCACCCTTACCCCTACAAAA
AACAGACAAATGCTTCGTCTTGGCGGCCTAATGGCACCCGTTGCACTGAG
GCGGAGTGTTCAATCAACCATTTGCGTCGCATCACGCTCGTCCCGGTCAC
CATTGCTTCAGgtaagcctccttcgatgtccgagtctccgtgtatgttca
gcttcgtcagatcctcctttctactgtctgtgtggattcccaggagtatg
ctcgaccctttctcgtttaatcatcgcacaacatacctctgcggggcctt
gttggtcatccacccacgtgtccgtgctgcgcttagaccaggataggggg
aggtctcgcctcccttgtcgtgcctccctcctcagtacctttgaccatgt
cgcgtctatgcaagctttccgcatcgacaatccgtctccacttcattcca
ccaataccattcacactaaaccacacacagcagAAGCCTCGCCGCCACAT
CGCCACCACAACACTTCCCCCCGAGCACCAATCCTTCGCCCGCTCCCCCT
CGACTTCCTCCTCATCTTCCTGTTCCTCCTCTGCTTCATCGTCCACCAAT
GTCCGTCCCTTGGCCTACTGGCTGCTGGGTACGGGGGCCCTCGTGGCAGG
AATGGTGACCGTGGGTGGCATTACGCGCCTGACAAAATCGGGCTTGTCAA
TGACTGATTGGAGGTTGCAAGGCTCGTTGCCGCCTTTGAATGACGCGGAG
TGGCTAGCGGAATTCACGAGATACAAACAATTCCCGGAGTACCAGCAACG
ACAGAGCATGACCTTGGATGAATTCAAGTTTATTTTCTATTGGGAGTGGG
GTCATAGGATGATGGGTCGATTTATTGGGCTGGCGTACGGCGTCCCTCTT
GTTTACTTCGCGGCGCGTGGTCGGATCCCACGGAGTCTCTACCCGCGGTT
GGGGGCATTGTTCGCACTTGGAGGAGGCCAAGGGTTGATTGGATGGTGGA
TGGTGAAGAGCGGGCTGGAGATGGATCCGCAGCAGAGGAAGGAGATTCGC
GTGAGTCCTTACAGGCTCGCAGCCCACCTGGGCATGGCATTCACCACGTT
TTCCCTTCTCATTTGGACGGGCCTCGACCTTCTCCATCCTCCAGAGAAGG
CCTCGCGGGCCGCTGCAGTGTTGCAAGAGCGACTCTTGGCCGCTGCGTCT
CCGCAGGCTTCCCAGCAGTTGCTGCAGCGGGTGTCTCGTGTGCGTAACTT
GGGAATCGCATCTGCTGCCTTGCTCGCTACGACCATCGTGTCAGGGGCCT
TCGTCGCGGGGAATGACGCTGGACATGCGTACAATGAGTTCCCAAAAATG
ATGCCTCACGCCTGGATTGCCCCTGAGGTGTTTGAATGGTCAAATTTTGA
ACCGAAGTGGCGCAATATATTCGAAAACACCGCATTGGTACAGCTGGATC
ACCGTCTCCTTGCCTTGTCCACAGCCGGTTTGATTGGCGCCACGCTCGTC
GCGGCCCGCCGAGGACAAGTATGGTCTATGTTGCCTTCAGAGACCAAGAC
GGCGCTTACCGCCACAGTTGGTATGGCAGGAGCGCAGGTCGCGCTGGGGA
TCTCAACGTTGCTGCTGTACGTCCCCGTTCCCTTGGCGGCGGCGCACCAG
GCGGGGTCATTAGTGTTGTTAACTTTACTGTCGTGGTCCGTGCATTCCAT
GAAATTCCTCAAGAAGCTGCCGGCGGGCTCGGCACAGCAGTTGTGGAAGC
AACAGCAGCAGCAGCAGCAGGGAGGGACAGCAGCAGTTGGGAAAGTTGTG
GCTGAGATGGTTAAGTAGGCGGGGGAGGGGAATGAGGGAGGGAGGGAGG
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protein sequence of NO05G03970.1

>NO05G03970.1-protein ID=NO05G03970.1-protein|Name=NO05G03970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MLRLGGLMAPVALRRSVQSTICVASRSSRSPLLQKPRRHIATTTLPPEHQ
SFARSPSTSSSSSCSSSASSSTNVRPLAYWLLGTGALVAGMVTVGGITRL
TKSGLSMTDWRLQGSLPPLNDAEWLAEFTRYKQFPEYQQRQSMTLDEFKF
IFYWEWGHRMMGRFIGLAYGVPLVYFAARGRIPRSLYPRLGALFALGGGQ
GLIGWWMVKSGLEMDPQQRKEIRVSPYRLAAHLGMAFTTFSLLIWTGLDL
LHPPEKASRAAAVLQERLLAAASPQASQQLLQRVSRVRNLGIASAALLAT
TIVSGAFVAGNDAGHAYNEFPKMMPHAWIAPEVFEWSNFEPKWRNIFENT
ALVQLDHRLLALSTAGLIGATLVAARRGQVWSMLPSETKTALTATVGMAG
AQVALGISTLLLYVPVPLAAAHQAGSLVLLTLLSWSVHSMKFLKKLPAGS
AQQLWKQQQQQQQGGTAAVGKVVAEMVK*
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Synonyms
Publications