NO05G03730, NO05G03730 (gene) Nannochloropsis oceanica

Overview
NameNO05G03730
Unique NameNO05G03730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1296
Alignment locationchr5:975408..976703 -

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Properties
Property NameValue
DescriptionRibosomal rna-processing protein 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:975408..976703 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR024326RRP7
Homology
BLAST of NO05G03730 vs. NCBI_GenBank
Match: EWM27985.1 (ribosomal rna-processing protein 7 [Nannochloropsis gaditana])

HSP 1 Score: 247.3 bits (630), Expect = 6.100e-62
Identity = 171/300 (57.00%), Postives = 195/300 (65.00%), Query Frame = 0
Query:    1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSKCAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG 301
            M VKGY V+ VPL  +TSSPFS F+YVRQH++K  E+LP GRTLFLANVPA+ GVD+  YL+EAFA++GEVE VRVK+  D++   S T K AI F++FR+SKG+K+VM+A    SRL PPS    L  YKPSK                              Q L+RRFRA+                               AA+ PDADGFVTV+Y         XXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG
Sbjct:   45 MHVKGYKVITVPLNNNTSSPFSRFVYVRQHNNKGEEELPHGRTLFLANVPAQIGVDVHMYLKEAFAKFGEVELVRVKESSDNDAMSSYTVKSAIAFVIFRSSKGVKSVMNAPFGESRLPPPSVKASLAEYKPSKRQRKLHSQYQDTANETERKEAMAAALEEDVQSLVRRFRAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAASKPDADGFVTVAYGKKRRRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG 344          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_010408972.1 (ribosomal RNA-processing protein 7 homolog A [Corvus cornix cornix])

HSP 1 Score: 95.5 bits (236), Expect = 3.000e-16
Identity = 91/307 (29.64%), Postives = 122/307 (39.74%), Query Frame = 0
Query:    5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            GY  LAV   E   SP    L V++H  + G D   P  RTLF+ NVP   G D    L   F+R G V+ V + D P   E    LTSK           + ++VFR   G++A  + S +   L       +  G                                    K I  + A +   K L+ EVD YM  ++   AEE+ K       PD +G+V V+                                    EL NFYA Q RE+KRE +A+LR +FEEDK RI  M+A RKF+P+
Sbjct:   15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPD---SLSRLFSRCGHVQSVDICDKPGPGEKKDKLTSKFFDHKTVKGFQVAYVVFRKPAGVQAAKALSQEGPLLISTESHPVKTG----------------------------------ISKWIASYEASIVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRESKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_005527743.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Pseudopodoces humilis])

HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15
Identity = 90/307 (29.32%), Postives = 121/307 (39.41%), Query Frame = 0
Query:    5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            GY  LAV   E   SP    L V++H  + G D   P  RTLF+ NVP   G D    L   F+R G V+ V + D P   E    LTSK           + ++VFR +  ++A  + S +   L       +  G                                    K I  + A +   K L+ EVD YM  ++   AEE+ K       PD +G+V V+                                    EL NFYA Q RE KRE +A+LR +FEEDK RI  M+A RKF+P+
Sbjct:   15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPDA---LSRLFSRCGHVQSVDMCDKPGPGEKKDKLTSKFFDHKTPKGFQVAYVVFRKAAAVQAAKALSKEGPLLISTKSHPVKTG----------------------------------ISKWIASYEASIVNPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPWTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_015482715.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Parus major])

HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15
Identity = 90/307 (29.32%), Postives = 121/307 (39.41%), Query Frame = 0
Query:    5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSK---------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            GY  LAV   E   SP    L V++H  + G D   P  RTLF+ NVP   G D    L   F+R G V+ V + D P   E    LTSK           + ++VFR +  ++A  + S +   L       +  G                                    K I  + A +   K L+ EVD YM  ++   AEE+ K       PD +G+V V+                                    EL NFYA Q RE KRE +A+LR +FEEDK RI  M+A RKF+P+
Sbjct:   15 GYTALAVKFAERQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPDA---LSRLFSRCGHVQSVDMCDKPGPGEKKDKLTSKFFDHKTPKGFQVAYVVFRKAAAVQAAKALSKEGPLLISTKSHPVKTG----------------------------------ISKWIASYEASIVNPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_022305800.1 (ribosomal RNA-processing protein 7 homolog A-like [Crassostrea virginica])

HSP 1 Score: 93.2 bits (230), Expect = 1.500e-15
Identity = 82/309 (26.54%), Postives = 128/309 (41.42%), Query Frame = 0
Query:    1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            ++++G+ V+     E  S      LYV++ + + G + P+ RTLF+AN+P          +++ F  +G+V +V + D P  E     +SK            + +I+F+ +  L  V S   D           +L G K                                  K    ++  +   + LQEE+D YM +++  +  EKR        PD DG+VTV+                                    ELKNFYA QMRE KR+++A LR +FEEDK RI  MKA+RKF+P+
Sbjct:    8 VVIEGFTVIQTSFQE--SGKIGHSLYVKE-NERRGANRPKDRTLFVANIPPYC---TEKSIQQVFKTFGDVMKVYLYDKPHSEDPPPNSSKYFPDRSKVKGFKVAYIIFKKAAALNKVKSHPYDKVVSLSSDEVPILTGIK----------------------------------KWQAEYQQNVCNPQRLQEEIDKYMTAYDEEQEREKRLALEQEGVPDEDGWVTVT-------RHGKNKGAPRTETMEKKVTSKDKKRQAEKELKNFYAFQMRETKRDKIAELRKKFEEDKQRISLMKASRKFRPY 269          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: EKC23935.1 (Ribosomal RNA-processing protein 7-like protein A [Crassostrea gigas])

HSP 1 Score: 92.4 bits (228), Expect = 2.500e-15
Identity = 82/309 (26.54%), Postives = 123/309 (39.81%), Query Frame = 0
Query:    1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            +++ G+ V+     E  S      LYV++  S+ G   P+ RTLF+ NVP          +R  F+ +G+V +V + D P  E      S             + +I+F+ +  L    S   D      P+ + +L G K                                  K    ++  +     LQ E+D YM  ++  +  EKR        PD DG+VTV+                                    ELKNFYA QMRE+KR+++A LR +FEEDK RI  MKA+RKF+P+
Sbjct:   51 VVIDGFTVIQTKFQE--SGKIGHSLYVKEAQSR-GSSQPKDRTLFVVNVPPYC---TQASIRSVFSTFGDVTKVYLYDRPHKEDPPPTKSTYFPDRPEPKGFKVAYIIFKKAASLAKATSHPYDKVLQLSPAENPILTGIK----------------------------------KWQMEYQQNVCNPTALQAEIDKYMTHYDEEQEREKRLALEQEGVPDKDGWVTVT-------RHGKNKGAPRTETMEKKITSKNKKKQAEKELKNFYAFQMRESKRDKIAELRKKFEEDKQRISFMKASRKFRPY 312          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_011446230.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Crassostrea gigas])

HSP 1 Score: 92.4 bits (228), Expect = 2.500e-15
Identity = 82/309 (26.54%), Postives = 123/309 (39.81%), Query Frame = 0
Query:    1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSK----------CAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            +++ G+ V+     E  S      LYV++  S+ G   P+ RTLF+ NVP          +R  F+ +G+V +V + D P  E      S             + +I+F+ +  L    S   D      P+ + +L G K                                  K    ++  +     LQ E+D YM  ++  +  EKR        PD DG+VTV+                                    ELKNFYA QMRE+KR+++A LR +FEEDK RI  MKA+RKF+P+
Sbjct:    8 VVIDGFTVIQTKFQE--SGKIGHSLYVKEAQSR-GSSQPKDRTLFVVNVPPYC---TQASIRSVFSTFGDVTKVYLYDRPHKEDPPPTKSTYFPDRPEPKGFKVAYIIFKKAASLAKATSHPYDKVLQLSPAENPILTGIK----------------------------------KWQMEYQQNVCNPTALQAEIDKYMTHYDEEQEREKRLALEQEGVPDKDGWVTVT-------RHGKNKGAPRTETMEKKITSKNKKKQAEKELKNFYAFQMRESKRDKIAELRKKFEEDKQRISFMKASRKFRPY 269          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_013389988.1 (ribosomal RNA-processing protein 7 homolog A [Lingula anatina])

HSP 1 Score: 91.3 bits (225), Expect = 5.600e-15
Identity = 76/309 (24.60%), Postives = 126/309 (40.78%), Query Frame = 0
Query:    1 MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL-PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEI---------AVSLTSKCAIGFIVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            +++ G+ V+ + L +   S     +Y+++HS +  +   P+ RTLF+ N+P     +    L+  F+  G++E + ++  P             +        + +IVF T   +K       D  R+     S +L G K                                  K  + ++A LP    LQ+E+D YM  F+    EE  +       PD +G+VTV+                                    EL NFYA Q+RE+K EQ+A+LR +FEEDK +I  M+A+RKF+P+
Sbjct:    5 VVINGFTVIPLKLNKQCKS--CHHVYLKEHSVRETDAAKPKDRTLFILNLPPYCNEEC---LKRLFSDCGKIENIHIQQKPSSSAPEVKNRFFKSAKDIEGFRVAYIVFHTPAAVKKAKQFKFDPPRILSTDESPVLTGMK----------------------------------KWCQEYKASLPNVHALQKEIDAYMEEFDKKIQEEAAQAKEEEGVPDDEGWVTVT-------RHSKNKGVPRTEAQEKRVTQREKKKRKEKELLNFYAFQVRESKMEQIAKLRQKFEEDKQKISLMRASRKFRPY 267          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_014738051.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Sturnus vulgaris])

HSP 1 Score: 90.9 bits (224), Expect = 7.300e-15
Identity = 92/300 (30.67%), Postives = 121/300 (40.33%), Query Frame = 0
Query:    9 LAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP-DDEIAVSLTSKCAIGFIVFRTSKGLKAVM------SASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            LAV   E   SP    L V++H  + G D   P  RTLF+ NVP   G D    L + F+R G V+ V + D P   E    LTSK    F   +T+KG +         +A   A  LS     ++  G  P K                               K I  + A +   K L+ EVD YM  ++   AEE+ K       PD +G+V V+                                    EL NFYA Q RE KRE +A+LR +FEEDK RI  M+A RKF+P+
Sbjct:   11 LAVKFAERQRSPHC--LLVKEHQVREGTDTAHPPRRTLFVLNVPPYCGPD---SLSKLFSRCGHVQSVDICDKPGPGEKKDKLTSK----FFDHKTAKGFQVAYVVFRKPAAVQAAKALSQQGPLLISTGSHPVK---------------------------TGISKWIASYEASIVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 267          
BLAST of NO05G03730 vs. NCBI_GenBank
Match: XP_017683125.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A [Lepidothrix coronata])

HSP 1 Score: 90.9 bits (224), Expect = 7.300e-15
Identity = 89/307 (28.99%), Postives = 119/307 (38.76%), Query Frame = 0
Query:    5 GYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDL--PQGRTLFLANVPARTGVDIGTYLREAFARYGEVEEVRVKDHP------DDEIAVSLTSKCAIGF----IVFRTSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEKRKRFAAATTPDADGFVTVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPF 300
            GY  LAV  G    SP    L V++H  + G D   P  RTLF+ NVP   G D    L   F+R G V+ V + D P      +   +     K   GF    +VFR   G++A  + S +   L       +  G                                    K I  + A +   K L+ EVD YM  ++   AEE+ K       PD +G+V V+                                    EL NFYA Q RE KRE +A+LR +FEEDK RI  M+A RKF+P+
Sbjct:   15 GYTALAVKFGARQRSPHC--LLVKEHQVREGADTAHPPRRTLFVLNVPPYCGPD---SLSRLFSRCGHVQSVDICDKPGPGEKKEKPKSKFFNRKTITGFQVAYVVFRKPAGVQAAKALSQEGPLLISTETHPVKTG----------------------------------ISKWIASYEASVVDPKELKAEVDAYMQDYDKKMAEEEAKAAKEEGVPDEEGWVKVT-------RKGRKPGLPRTEAANLRVLEKEKQKRARKELLNFYAWQHRETKREHIAQLRKKFEEDKQRIALMRAQRKFRPY 275          
The following BLAST results are available for this feature:
BLAST of NO05G03730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27985.16.100e-6257.00ribosomal rna-processing protein 7 [Nannochloropsi... [more]
XP_010408972.13.000e-1629.64ribosomal RNA-processing protein 7 homolog A [Corv... [more]
XP_005527743.11.500e-1529.32PREDICTED: ribosomal RNA-processing protein 7 homo... [more]
XP_015482715.11.500e-1529.32PREDICTED: ribosomal RNA-processing protein 7 homo... [more]
XP_022305800.11.500e-1526.54ribosomal RNA-processing protein 7 homolog A-like ... [more]
EKC23935.12.500e-1526.54Ribosomal RNA-processing protein 7-like protein A ... [more]
XP_011446230.12.500e-1526.54PREDICTED: ribosomal RNA-processing protein 7 homo... [more]
XP_013389988.15.600e-1524.60ribosomal RNA-processing protein 7 homolog A [Ling... [more]
XP_014738051.17.300e-1530.67PREDICTED: ribosomal RNA-processing protein 7 homo... [more]
XP_017683125.17.300e-1528.99PREDICTED: ribosomal RNA-processing protein 7 homo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003484NSK003484Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03730.1NO05G03730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669960gene_3182Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g16gene2535Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03730.1NO05G03730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03730 ID=NO05G03730|Name=NO05G03730|organism=Nannochloropsis oceanica|type=gene|length=1296bp
AAATACACACAGCACGTGAGATCTTTTTTGGGTTTCCTTTCAGATTGCTT
GTGGAGCTGAAAGCACCGCCAACCCCCAGCAGTCTCGCATTTATCCTCCC
TCGCCACTCGCTCCCAAGCGCTCACTAAAACACTACTTGCTTTATAAGCC
ACGACTATGCTAGTCAAGGGCTACAATGTCTTAGCAGTGCCCTTGGGTGA
GGATACGTCTAGCCCCTTCTCTTCCTTCCTCTACGTCCGTCAGCATTCGA
GCAAAAGgtaaattctgatcccgctgatttcccgaagtatcttttgattt
cctcacgccattgccccacgctcaaccatccatcgactcccaccgactcc
aactccaaccatacccaaacatcgcatagCGGCGAAGACTTACCCCAAGG
AAGGACACTTTTTCTGGCCAACGTCCCCGCGCGGACGGGCGTGGACATCG
GGACCTACTTGAGAGAGGCGTTTGCCCGGTACGGGGAAGTTGAAGAGGTT
CGTGTCAAGGACCACCCTGACGACGAAATCGCCGTCTCTTTAACAAGCAA
ATGTGCCATTGGATTTATCGTGTTTCGAACTAGCAAAGGTCTTAAGGCCG
TGATGAGCGCCAGCGGCGATGCTTCCCGTCTATCACCGCCGTCGAGGAGC
GTGCTTTTGCCTGGGTACAAACCTTCCAAACGACAACTCAAGAAGCAGCA
GCAGCAGCAGCAAGAGCAGCAGCAAGAGAGAAGAAAAGAGGATGACAAGG
AAATTATCGACGATGAAGTGCAAAAACTGATACGGCGCTTCAGAGCGAGA
TTGCCACAGGGCAAGGTCTTGCAAGAGGAGGTGGATGGCTACATGGCCTC
ATTCGAGGCCGCCGAGGCAGAGGAGAAGAGAAAAAGGTTCGCAGCAGCGA
CAACACCGGATGCCGATGGATTTGTCACCGTGTCGTACGGCAAGAAACGT
CGGCGGGGAGGTGCAGGAGGAGCAAAGAACGAGGCAAATGGGGGGAAGAA
AAGGAGTAGGTCGGGAAGTCACAAGAAGAAAAAGAAGGAGACGGAACTGA
AGAATTTTTACGCGCACCAGATGCGAGAAGCGAAGCGGGAGCAGCTTGCC
CGTCTTCGGACTCGTTTTGAGGAGGACAAGGCGCGAATAGAAAAGATGAA
AGCCGCAAGGAAATTTAAACCGTTTGGGTAACCAATGGTGTACGCGTGTG
TGTGCGTGTGTGTGTGCATGTATTTGTGGGTCAAAAGGGAAAAGAGAGAT
AAGTTGATGATGCAACACAAATGAAATAAAATACACCCAGAGGAGC
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protein sequence of NO05G03730.1

>NO05G03730.1-protein ID=NO05G03730.1-protein|Name=NO05G03730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bp
MLVKGYNVLAVPLGEDTSSPFSSFLYVRQHSSKSGEDLPQGRTLFLANVP
ARTGVDIGTYLREAFARYGEVEEVRVKDHPDDEIAVSLTSKCAIGFIVFR
TSKGLKAVMSASGDASRLSPPSRSVLLPGYKPSKRQLKKQQQQQQEQQQE
RRKEDDKEIIDDEVQKLIRRFRARLPQGKVLQEEVDGYMASFEAAEAEEK
RKRFAAATTPDADGFVTVSYGKKRRRGGAGGAKNEANGGKKRSRSGSHKK
KKKETELKNFYAHQMREAKREQLARLRTRFEEDKARIEKMKAARKFKPFG
*
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Synonyms
Publications