NO05G03680, NO05G03680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03680 vs. NCBI_GenBank
Match: EWM27928.1 (mechanosensitive ion channel [Nannochloropsis gaditana]) HSP 1 Score: 359.4 bits (921), Expect = 1.500e-95 Identity = 195/295 (66.10%), Postives = 217/295 (73.56%), Query Frame = 0 Query: 120 GLRANLHLPHMHAPHLQIPKGGFVFSPFRHLGGAH--GN------SVNAPPPSHAAGASVHDFLRPQSGTRVKNVSVAGSVLSSP-------AERDASQGHSSHGEPHESKTTNDKHYPHQHMKSFFQSLRSWTSFKLYCCGVRDLIFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLERKDKSGRVIHTSG 400 G+ + LHLPH KGGF+FSPFRH GGAH GN + PS +G SV+ + S R S AG +S P AER QG + + N HYPH HMKSFFQSLRSW SFK YCCGVRD + IARPLETFLLRTG +HDRDLSRFIARA A V +MIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPF+TGWKI+VG+Y GTVLS+DSRYVRLLT+EDAMILVPAYQVYTQ ITV+ERKDK+GRVIH++G Sbjct: 86 GMGSRLHLPHXXXXXXXXXKGGFLFSPFRHHGGAHAVGNLAKVTENSGGHTPSIFSGMSVYHMFKHHSADRRDQASAAGLAVSHPTGGSVATAERTLGQGDG------KQENQNSPHYPHLHMKSFFQSLRSWVSFKQYCCGVRDFLLIARPLETFLLRTGAVHDRDLSRFIARATAFVIISMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFKTGWKIRVGAYTGTVLSIDSRYVRLLTEEDAMILVPAYQVYTQPITVIERKDKAGRVIHSAG 374
BLAST of NO05G03680 vs. NCBI_GenBank
Match: PJF16694.1 (hypothetical protein PSACC_03441 [Paramicrosporidium saccamoebae]) HSP 1 Score: 131.7 bits (330), Expect = 5.300e-27 Identity = 67/151 (44.37%), Postives = 101/151 (66.89%), Query Frame = 0 Query: 246 GVRDLIFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKV------GSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLERKDK 391 G + I+RP+E +LR+ D D++RF+ ++ + +T+ + LGTLG+DTKPIIAG+GV+GF +GFALKEIATN LSG+LLVF +PF+ G +KV + +G V S+D+RYV L T + +++VP+ VYT + V + + K Sbjct: 59 GFKSSFSISRPIENLILRSRLTRDVDMARFLGKSAGIAIYTLAGVTALGTLGVDTKPIIAGIGVTGFTLGFALKEIATNFLSGVLLVFNKPFQKGQHLKVLGAAAGQNLEGEVESIDARYVLLRTKDRGLVMVPSVVVYTSPLLVSKTEKK 209
BLAST of NO05G03680 vs. NCBI_GenBank
Match: XP_013236979.1 (hypothetical protein DI09_66p160 [Mitosporidium daphniae] >KGG50552.1 hypothetical protein DI09_66p160 [Mitosporidium daphniae]) HSP 1 Score: 116.7 bits (291), Expect = 1.700e-22 Identity = 58/128 (45.31%), Postives = 90/128 (70.31%), Query Frame = 0 Query: 256 PLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKV----GSYQGTVLSVDSRYVRL-LTDEDAMILVPAYQVY 379 P+E ++R+ D DL+R ++ IA + + + +++GTLG+DT PII G+GV+GF +GFALKEIATN LSG+LL+F++PF G +K+ G +GTV ++D R+V L L + +A++LVP+ VY Sbjct: 73 PIERLIIRSRMTADTDLARLASKTIAALTYGFLGVTVMGTLGIDTTPIITGIGVTGFTIGFALKEIATNFLSGVLLMFEKPFEKGCHLKIHGGGGGIEGTVTAIDLRHVHLKLENSEAIVLVPSSVVY 200
BLAST of NO05G03680 vs. NCBI_GenBank
Match: EPZ31600.1 (Alkaline-phosphatase-like domain-containing protein [Rozella allomycis CSF55]) HSP 1 Score: 109.0 bits (271), Expect = 3.600e-20 Identity = 53/124 (42.74%), Postives = 80/124 (64.52%), Query Frame = 0 Query: 248 RDLIFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMIL 372 R L + +P+ +F+ RT I D + + + + +I S+LG+LG+D +P+I GLG++GF VGFALK+I N +SG LL+FQ+PF+ IK GSYQG V+ +D +YV L T E ++L Sbjct: 19 RYLFSLKKPISSFITRTRLIKDDHMVQLVTSSTVFTVKAIIAMSVLGSLGVDMRPVITGLGITGFTVGFALKDIGANFVSGFLLLFQKPFKMNDVIKSGSYQGKVIGMDVKYVHLQTPEGRILL 142
BLAST of NO05G03680 vs. NCBI_GenBank
Match: GBE15414.1 (small-conductance mechanosensitive channel [bacterium BMS3Abin14]) HSP 1 Score: 95.1 bits (235), Expect = 5.500e-16 Identity = 46/118 (38.98%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 269 DRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLE 387 D++L+ +AR + + LGTLG++ ++AGLG++GF +GFALK+ +N+LSG+L++ RPF G +IK+ Y+G V+S+D RY L +D + +L+P +++T ITV + Sbjct: 50 DKNLTLLLARTSNITLTIFGFVTALGTLGINVSALVAGLGLTGFALGFALKDTISNLLSGVLILLYRPFERGSRIKISGYEGIVISIDLRYTELDSDGN-KVLIPNSKLFTDPITVFQ 166
BLAST of NO05G03680 vs. NCBI_GenBank
Match: GBE53455.1 (small-conductance mechanosensitive channel [bacterium BMS3Bbin14] >GBE13512.1 small-conductance mechanosensitive channel [bacterium BMS3Abin13]) HSP 1 Score: 93.6 bits (231), Expect = 1.600e-15 Identity = 45/118 (38.14%), Postives = 78/118 (66.10%), Query Frame = 0 Query: 269 DRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLE 387 D +L+ ++R + + I + LGTLG++ ++AGLG++GF +GFA+K+ +N+LSG+L++ RPF G +IK+ Y+G V+++D RY L E +L+P +++T ITVL+ Sbjct: 50 DGNLTSLLSRTSNITLTILGIITALGTLGVNVSALVAGLGLTGFALGFAMKDTISNLLSGVLILLYRPFEIGNRIKISGYEGIVIAIDLRYTE-LDSESNKVLIPNSKLFTDPITVLQ 166
BLAST of NO05G03680 vs. NCBI_GenBank
Match: WP_069969809.1 (mechanosensitive ion channel [Desertifilum sp. IPPAS B-1220] >OEJ72616.1 mechanosensitive ion channel [Desertifilum sp. IPPAS B-1220]) HSP 1 Score: 90.5 bits (223), Expect = 1.300e-14 Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0 Query: 293 LGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLERKDK 391 LGTLG+D ++AGLG++GF +G ALK+I +N+LSG+L++ +PFR IKVG +G VL +D RY L D + IL+P ++T I ++++++K Sbjct: 74 LGTLGIDVSALVAGLGLTGFALGLALKDIVSNLLSGVLILIYQPFRRNDWIKVGPTEGKVLQIDLRYTTLQAD-NQKILIPNSSLFTNTICIIDKEEK 170
BLAST of NO05G03680 vs. NCBI_GenBank
Match: PJF25129.1 (mechanosensitive ion channel [Chloroflexi bacterium]) HSP 1 Score: 90.1 bits (222), Expect = 1.800e-14 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 0 Query: 269 DRDLSRFIARAIALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLER 388 D L R L + + LGT+G+D ++AGLG++ F +GFAL+++ N+L+GIL++ RPFR G I VG +G V +D RY L T E IL+P ++T+AITVL + Sbjct: 52 DESLRDLFVRLARLTTLVIGAITALGTIGIDVSALVAGLGLTSFALGFALQDVIRNILAGILILMYRPFRRGNYIVVGGREGIVTDIDLRYTTLQT-ETQRILIPNANMFTEAITVLNQ 169
BLAST of NO05G03680 vs. NCBI_GenBank
Match: PCH59250.1 (mechanosensitive ion channel [Gammaproteobacteria bacterium]) HSP 1 Score: 89.7 bits (221), Expect = 2.300e-14 Identity = 46/105 (43.81%), Postives = 73/105 (69.52%), Query Frame = 0 Query: 280 IALVAFTMIITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITV 385 +ALV F I+ LG LG++ +IAGLG++GF +GFALK+ +N+LSG+L++ +PF G +IK+ Y+G V+++D RY L ++ D IL+P +++T ITV Sbjct: 63 VALVMFGFILA--LGVLGVNVSALIAGLGLTGFALGFALKDTISNLLSGVLILLYQPFEIGDRIKISGYEGDVVAIDLRYTELSSEGD-KILIPNSKLFTDPITV 164
BLAST of NO05G03680 vs. NCBI_GenBank
Match: WP_015147392.1 (small-conductance mechanosensitive channel [Oscillatoria acuminata] >AFY80742.1 small-conductance mechanosensitive channel [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 89.4 bits (220), Expect = 3.000e-14 Identity = 56/144 (38.89%), Postives = 84/144 (58.33%), Query Frame = 0 Query: 250 LIFIARPLETFLLRTGTIHDRDLSRFIARAIALVAFTMI-------ITSILGTLGLDTKPIIAGLGVSGFIVGFALKEIATNVLSGILLVFQRPFRTGWKIKVGSYQGTVLSVDSRYVRLLTDEDAMILVPAYQVYTQAITVLE 387 LI I+ + T LLR S A+ L+ T+I I + LGT+G+D +IAGLG++GF VG ALK+I +N++SG L++ RPFR +I VG+++GTV+ +D RY L E IL+P ++T I V++ Sbjct: 21 LIIISFWIATVLLRKLIRRFSITSNLSLDALKLLEQTLISTVWIVGIVTALGTVGIDVSALIAGLGLTGFAVGLALKDILSNLVSGALILIYRPFRRRDRISVGNFEGTVIDIDLRYT-TLQGEGKTILIPNSYLFTNTICVIQ 163 The following BLAST results are available for this feature:
BLAST of NO05G03680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03680 ID=NO05G03680|Name=NO05G03680|organism=Nannochloropsis oceanica|type=gene|length=5561bpback to top protein sequence of NO05G03680.2 >NO05G03680.2-protein ID=NO05G03680.2-protein|Name=NO05G03680.2|organism=Nannochloropsis oceanica|type=polypeptide|length=423bpback to top protein sequence of NO05G03680.1 >NO05G03680.1-protein ID=NO05G03680.1-protein|Name=NO05G03680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=333bpback to top Synonyms
Publications
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