NO05G03470, NO05G03470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03470 vs. NCBI_GenBank
Match: EWM28047.1 (tata-box binding protein [Nannochloropsis gaditana]) HSP 1 Score: 373.2 bits (957), Expect = 7.100e-100 Identity = 199/256 (77.73%), Postives = 214/256 (83.59%), Query Frame = 0 Query: 1 MASQMTSGGGFGEISPLVRGSSGAAXXXXXXXXSIGPGSAAGGPSIETVRFVNSIKLTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRKLPMAPSMVVVGSGE----EGGREGEGE 253 MAS + GG G +SP++R ++G GGPS ET+RFV SIKLTNVVATVNLDCKP+LKSIALGARNAEYNPRRFPAVIMHIK+PKSAALIFSSGKMVVTGTRSE DSL+AA KYT+IM+RLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKT+RDMDAALEKLHPILLEYRK+P APS V V G GGR G G+ Sbjct: 1 MASPLMGGG--GGLSPIMRSNAGPPAGHME--------GGTGGPSAETLRFVASIKLTNVVATVNLDCKPDLKSIALGARNAEYNPRRFPAVIMHIKEPKSAALIFSSGKMVVTGTRSETDSLQAAHKYTTIMKRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTRRDMDAALEKLHPILLEYRKMPAAPSSVPVKEGAMSAGGGGRGGVGK 246
BLAST of NO05G03470 vs. NCBI_GenBank
Match: XP_016609523.1 (TATA-box-binding protein [Spizellomyces punctatus DAOM BR117] >KND01484.1 TATA-box-binding protein [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 227.6 bits (579), Expect = 4.800e-56 Identity = 109/173 (63.01%), Postives = 140/173 (80.92%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I++PK+ ALIF+SGKMVVTG +SEE S AA+KY I+++L A T+F++QN+ SCD+ FPIRLEGL ++ FCSYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ AA E + P+L E+RK Sbjct: 28 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEEMSKLAARKYARIIQKLGFQAKFTDFKIQNIVGSCDVKFPIRLEGLALNHGSFCSYEPELFPGLIYRMLRPKIVLLIFVSGKIVLTGAKVRDEIYAAFENIFPVLTEFRK 200
BLAST of NO05G03470 vs. NCBI_GenBank
Match: XP_001905926.1 (uncharacterized protein PODANS_4_8980 [Podospora anserina S mat+] >CAP66592.1 unnamed protein product [Podospora anserina S mat+] >CDP28324.1 Putative TATA-box-binding protein [Podospora anserina S mat+]) HSP 1 Score: 226.9 bits (577), Expect = 8.200e-56 Identity = 113/194 (58.25%), Postives = 148/194 (76.29%), Query Frame = 0 Query: 37 PGSAAGGPSIETVRFVNSIKLTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRKL 231 PG+A+ GPS T L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I++PK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L A T+F++QN+ SCDI FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ A E ++P+L ++RK+ Sbjct: 68 PGAASAGPSGITP------TLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIRLEGLASKHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIYPVLQDFRKM 255
BLAST of NO05G03470 vs. NCBI_GenBank
Match: OLY85150.1 (TATA-box-binding protein [Smittium mucronatum]) HSP 1 Score: 226.1 bits (575), Expect = 1.400e-55 Identity = 108/173 (62.43%), Postives = 138/173 (79.77%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS AA+KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ A E ++P+L E+RK Sbjct: 66 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSKLAARKYARIVQKLGFPAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRNEIYQAFEAIYPVLTEFRK 238
BLAST of NO05G03470 vs. NCBI_GenBank
Match: XP_007372682.1 (hypothetical protein SPAPADRAFT_58486 [Spathaspora passalidarum NRRL Y-27907] >EGW35270.1 hypothetical protein SPAPADRAFT_58486 [Spathaspora passalidarum NRRL Y-27907]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 108/173 (62.43%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ AA E ++P+L E+RK Sbjct: 73 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 245
BLAST of NO05G03470 vs. NCBI_GenBank
Match: CCE43611.1 (hypothetical protein CPAR2_212550 [Candida parapsilosis]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 108/173 (62.43%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ AA E ++P+L E+RK Sbjct: 86 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 258
BLAST of NO05G03470 vs. NCBI_GenBank
Match: XP_003867010.1 (Tbp1 transcription initiation factor [Candida orthopsilosis Co 90-125] >CCG21572.1 Tbp1 transcription initiation factor [Candida orthopsilosis Co 90-125]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 108/173 (62.43%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ AA E ++P+L E+RK Sbjct: 78 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 250
BLAST of NO05G03470 vs. NCBI_GenBank
Match: EXX75401.1 (Spt15p [Rhizophagus irregularis DAOM 197198w] >EXX75405.1 Spt15p [Rhizophagus irregularis DAOM 197198w] >PKC61356.1 TBP-domain-containing protein [Rhizophagus irregularis]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 107/173 (61.85%), Postives = 140/173 (80.92%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I++PK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L AA T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK ++++ A E ++P+L E+RK Sbjct: 71 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRQEIYDAFESIYPVLTEFRK 243
BLAST of NO05G03470 vs. NCBI_GenBank
Match: XP_001528542.1 (TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239] >EDK42884.1 TATA-box binding protein [Lodderomyces elongisporus NRRL YB-4239]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 108/173 (62.43%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS A++KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ AA E ++P+L E+RK Sbjct: 75 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYPVLSEFRK 247
BLAST of NO05G03470 vs. NCBI_GenBank
Match: ORY08415.1 (TBP-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 225.7 bits (574), Expect = 1.800e-55 Identity = 108/173 (62.43%), Postives = 138/173 (79.77%), Query Frame = 0 Query: 57 LTNVVATVNLDCKPELKSIALGARNAEYNPRRFPAVIMHIKDPKSAALIFSSGKMVVTGTRSEEDSLRAAQKYTSIMRRLKCAANCTEFRVQNMTASCDIGFPIRLEGLVMDQPRFCSYEPELFPGLVYRMYNPKIVLLIFVSGRIIITGAKTKRDMDAALEKLHPILLEYRK 230 L N+VATVNLDC+ +LK+IAL ARNAEYNP+RF AVIM I+DPK+ ALIF+SGKMVVTG +SE+DS AA+KY I+++L A T+F++QN+ SCD+ FPIRLEGL F SYEPELFPGL+YRM PKIVLLIFVSG+I++TGAK + ++ A E ++P+L E+RK Sbjct: 67 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTTALIFASGKMVVTGAKSEDDSRLAARKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGHFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLTEFRK 239 The following BLAST results are available for this feature:
BLAST of NO05G03470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03470 ID=NO05G03470|Name=NO05G03470|organism=Nannochloropsis oceanica|type=gene|length=1581bpback to top protein sequence of NO05G03470.1 >NO05G03470.1-protein ID=NO05G03470.1-protein|Name=NO05G03470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bpback to top Synonyms
Publications
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