NO05G03460, NO05G03460 (gene) Nannochloropsis oceanica

Overview
NameNO05G03460
Unique NameNO05G03460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1851
Alignment locationchr5:910182..912032 -

Link to JBrowse

Properties
Property NameValue
DescriptionEstradiol 17-beta-dehydrogenase 12
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:910182..912032 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO05G03460 vs. NCBI_GenBank
Match: EWM28067.1 (estradiol 17-beta-dehydrogenase 12 [Nannochloropsis gaditana])

HSP 1 Score: 603.6 bits (1555), Expect = 3.900e-169
Identity = 298/345 (86.38%), Postives = 319/345 (92.46%), Query Frame = 0
Query:    1 MALDVKEKNLIKFILKRLVPILIVSFSFASYMELWDQPVRLLGFSLLAVWLVKFLNLALYFARVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARIMEAAAAKKGKGE 346
            MALDVKEKNLIKFI KRL+PIL++  SFASYMELW QPVRLLGF L+A+W++K     + F RVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELA+ GMNVIIISRS+ KLEEVKKGILKE+P  E+RC+AYDYTDREGA+AFF  LSETCK L GGLGILVNNVGMVNA+PEY+H LD  TTYGILQVNVEGTVRTTRA+AP LIDQRKGAIINVSSGSGNHPTPMISCYASTK+FITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVA+PYWFHALCGFFVGLYWDVGGSVMAAMRRNRARI+EAAA K+GK E
Sbjct:    1 MALDVKEKNLIKFIAKRLIPILLIFCSFASYMELWAQPVRLLGFCLVAIWIIKITRRVILFLRVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELAACGMNVIIISRSLNKLEEVKKGILKESPAAEIRCMAYDYTDREGAEAFFMKLSETCKHLEGGLGILVNNVGMVNAIPEYVHLLDDPTTYGILQVNVEGTVRTTRAIAPLLIDQRKGAIINVSSGSGNHPTPMISCYASTKSFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAFPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARILEAAAKKEGKKE 345          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: EWM28226.1 (estradiol 17-beta-dehydrogenase 12-b [Nannochloropsis gaditana])

HSP 1 Score: 299.7 bits (766), Expect = 1.200e-77
Identity = 167/347 (48.13%), Postives = 218/347 (62.82%), Query Frame = 0
Query:    1 MALDVKEKNLIKFILKRLVPILIVSFSFASYMELWDQPVRLLGFSLLAVWLVKFLNLALYFARVKLFPRD---PLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETP-GVEVRCIAYDYTDREGADAFFAMLSETCKSL--VGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGLYWDVGGSVMAAMRRNRARIMEAAAAKK 342
            M LDVKEK L+ FI K   P+++V   F +Y  +W+ P   LG    AV   K    ALY+   +L  R    P  YGKWAIVTGAT+GIGEAFA+ELA RGM+V+IISR+  KLE+ K  IL+  P GVEV  +A+D+T    ADAF+  L E   SL   GG+G+L+NNVG    +PE++H L       I++VNVEGTVR TR V PF+ D+R GAIINVSSGSGNHPTP++S YA+TKAFI +FS+ L +E +  G+DVLV TPYYV +     K    +  ++ R VQDTL +LG  D  YPY  HA+ G  +  YW    ++  +M + R R +     +K
Sbjct:    1 MGLDVKEKALLTFIAKVTFPLVVVMGPFIAYTRIWEHPFWFLGLVTFAVLTTK----ALYYLLERLTRRRKDLPREYGKWAIVTGATSGIGEAFAHELAQRGMSVLIISRTPAKLEKTKADILRNAPEGVEVEVLAFDFTCMPKADAFYLRLREVAASLHKRGGIGMLINNVGTNVEVPEFLHALPESEVLDIVRVNVEGTVRMTRTVLPFMADRRAGAIINVSSGSGNHPTPLLSTYAATKAFINEFSRSLHYEAKHVGIDVLVATPYYVSTPGMYNKPPGLLNCSSHRFVQDTLNVLGRYDSVYPYIAHAILGTLMDKYWATPAALFKSMNKTRMRALAKRQQQK 343          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: GBG26039.1 (Very-long-chain 3-oxoacyl-CoA reductase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 183.0 bits (463), Expect = 1.600e-42
Identity = 110/308 (35.71%), Postives = 171/308 (55.52%), Query Frame = 0
Query:   48 AVWLVKFLNLALYFARVKLFPR----DPLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFF-----------VGLYWDVGGSVMAAMRRNRARIMEAAAAK 341
            A++L K L + L F+  K   +    +P  YGKW +VTGAT GIG+AF +E+A +GMNV++ISR+  KL +  K I  + P V+ + +A DY++ + A      ++E   +L GGLG+LVNNVGM    P Y H+L      G+L++NV  T   TR   P ++ Q+KGAI+N+ S +G HP P+++ Y++TKAF+  FS  L+ E    G+ V    P++++S   + K+ +   PTA+   +  L  LG   V  P+  H +  +            V L + +G  + A   R RAR  E+  +K
Sbjct:   18 ALYLGK-LGVGLLFSAAKKLVQGGGVNPTKYGKWCVVTGATDGIGKAFCFEMAKKGMNVLLISRTESKLVDCSKEIEAKYPSVKTKYLAIDYSNFDKASQ--DKVAEAFSALDGGLGVLVNNVGMSYPFPLYFHELSDEDVRGLLELNVTSTTIMTRLALPVMLAQKKGAILNIGSAAGLHPNPLLALYSATKAFVEYFSYSLNTEYASKGIFVQCHAPFFIVSKLSKFKRPSAFIPTAEDYARKALTKLGGEPVVSPHAPHQVASYLMDCIPESLIQSVSLKYHLG--IRAKGLRKRAREEESKKSK 320          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_004310011.1 (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Fragaria vesca subsp. vesca])

HSP 1 Score: 181.8 bits (460), Expect = 3.600e-42
Identity = 105/293 (35.84%), Postives = 170/293 (58.02%), Query Frame = 0
Query:   37 QPVRLLGFSLLA--VWLVKFLNLALYFARVKLFPRDPL--SYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSG----NHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGLYWD 318
            QPV LL  S L   ++L   ++LA +     L P   L  SYG W ++TGAT GIG+AFAY+LA +G+N++++SRS  KLE V K I    P V+++ +A+D++  EG      ++ E  K L   +GIL+NNVG+      Y H++D +    I++VN+EGT R T AV P ++ +++GAI+N+ SG+     +H  P+ + YA+TKA++ + S  L  E +E+G+DV +  P YV +    +    ++++   P+A    +  +  +GY     P+W H+L  +F  L  D
Sbjct:   19 QPVWLLLLSSLGFFIFLKHSISLARWLFITFLRPAKDLERSYGSWGLITGATDGIGKAFAYQLAKKGLNLVLVSRSSNKLESVSKEIQSHFPDVKIKTVAFDFSSDEG---LVKLVEEKIKGL--DVGILINNVGVTYPAASYFHEVDEKVWMNIIRVNLEGTTRVTMAVVPGMLQRKRGAIVNLGSGAAVVVPSH--PLYTIYAATKAYVDKLSTSLYMEYKEYGIDVQIQVPLYVATKMVSKVAAIERSSLFIPSADAYAEAAVKRIGYEARCTPFWAHSLQWWFARLVPD 304          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_004349964.1 (steroid dehydrogenase [Cavenderia fasciculata] >EGG13265.1 steroid dehydrogenase [Cavenderia fasciculata])

HSP 1 Score: 179.9 bits (455), Expect = 1.400e-41
Identity = 101/273 (37.00%), Postives = 160/273 (58.61%), Query Frame = 0
Query:   41 LLGFSLLAVWLVKFLNLALYFARVKLFPRDPL-SYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFV 313
            L+G + +AV L KFLN  +Y + ++  P   L  YG WA+VTGAT GIG+A+AYE A RGMN+++ISRS +KL +  + I  + P ++ + +A+D+   +  D+ +  L +   S V  +G+LVNNVG+    P Y+ +L       ++ +NV+  +  TR V P +I +++GAIIN+SS SG  P P +S Y+ TKAF+ +FS  LS EL + G+ V  V P  V+SN  + +K +   P  +   +  +  +GY      YW H +  + +
Sbjct:   10 LIGLAFIAVHLYKFLNF-VYASTIR--PSTNLKKYGDWAVVTGATDGIGKAYAYEFAKRGMNIVLISRSQDKLNDEAQKIQSKYPKIQTKTVAFDFNTSD--DSKYESLYKQHLSQV-DIGVLVNNVGISYDHPMYLEELSVDRINALVNMNVKSMIALTRLVVPSMITKKRGAIINLSSISGMSPIPFLSVYSGTKAFVHRFSNSLSVELADKGIFVQCVAPGIVVSNMSKVRKPSLFVPLPEAYARSAISTIGYERTTSGYWAHKIQTYLI 276          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_011042342.1 (PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Populus euphratica])

HSP 1 Score: 178.7 bits (452), Expect = 3.100e-41
Identity = 98/290 (33.79%), Postives = 165/290 (56.90%), Query Frame = 0
Query:   34 LWDQPVRLLGFSLLA-VWLVKFLNLALYFARVKLFPR--DPLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGN--HPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGL 315
            L  QP+ LL FS L  +  +K   L L +       R  D   YG WA++TGAT GIG+AFA++LA +G+N+I++SR+  KL+ V   IL E PG +++ + +D++ +        ++ +  + L   +G+L+NNVG+      + H++D +    I++VN+EGT R TRAV P +I +++GAI+N+ SG+ +     P+ + YA+TKA++ QFS+CL  E + +G+ V    P YV +    +     ++++  PT +   +  +  +GY     PYW H+    F  L
Sbjct:    9 LLPQPMWLLLFSSLGFISFLKTSTLLLNWVYATFLRRKKDLKDYGSWAVITGATDGIGKAFAHQLAQKGLNLILVSRNPNKLKTVSSEILAEHPGTKIKTVGFDFSSKVSTRTVQGVIQKAVEGL--NVGLLINNVGITYPAARFFHEVDEKAWMDIVRVNLEGTSRVTRAVLPGMIQRKRGAIVNIGSGASSVMPSHPLFTIYAATKAYVDQFSRCLHVEYKRYGIHVQCQVPLYVATKMTSKIASIGRSSFFIPTPEDYAKSAIGRIGYEARCAPYWAHSFQWCFAWL 296          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_023323937.1 (very-long-chain 3-oxoacyl-CoA reductase-like [Eurytemora affinis])

HSP 1 Score: 178.7 bits (452), Expect = 3.100e-41
Identity = 105/276 (38.04%), Postives = 162/276 (58.70%), Query Frame = 0
Query:   41 LLGFSLLAVWLVKFLNLALYFARVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLD--ARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGL 315
            L G   +   L++F+   LY ++    P D    G WA+VTGAT GIG+ FA  LAS+G+NV+++SRS+ KL++V  G L+E   ++   IA D+T+ E     +  +SE  K++ GG+G+L+NNVGM    PEY  +++  A     ++  NV   +  TRAV P ++++ KGA+IN+SS S    TP++S Y+STKAF+ QFSQ L  E R  G+ V  + P YV+S   + + A++  P+ +   +  L  LG   ++  YW H L  F V +
Sbjct:    6 LAGTVFIGYNLIRFI---LYISKFVRTPVDVRKLGDWAVVTGATDGIGKGFANRLASQGINVVLVSRSLSKLQDV-AGELEEKYKIKTVVIAVDFTEPE---LVYNNISEGIKNIEGGIGLLINNVGMGYEHPEYFLEIENCAEACRNMVNCNVSSVLNVTRAVLPSMVNRGKGAVINLSSFSSLQSTPLLSVYSSTKAFVNQFSQDLEIEYRGKGIVVQALAPCYVVSKLSKVRSASFFIPSPETYAKSALNTLGLETISTGYWPHDLMLFGVNV 274          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_021901263.1 (very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Carica papaya])

HSP 1 Score: 178.3 bits (451), Expect = 4.000e-41
Identity = 102/285 (35.79%), Postives = 164/285 (57.54%), Query Frame = 0
Query:   39 VRLLGFSLLAVWLVKFLNLALYFARVKLFPRDPL---SYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSG----NHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFV 313
            V LLGF    ++L+K + +        +F R P+   +YG W ++TGAT GIG+AFA E A RG N++++SR+  KL+ V   I    P  +++ I +D++D     +    + E  + L   +GIL+NNVG+      Y H++D +    I++VN+EGT   TRAV P ++++++GAIIN+ SG+     +H  P+ + YA+TKA++ Q S+CL  E ++FG+DV    P YV +   +R    +KAT   P+A+      +  +G+     PYW H+L  FFV
Sbjct:   47 VSLLGF----IYLLKLILIPFLKWVYTVFLRPPINLHTYGSWVLITGATDGIGKAFAVEFARRGFNLVLVSRNRAKLQSVSNQIKSSFPITKIKTIPFDFSD-SNLSSGVGFIQEAIEGL--DVGILINNVGITYPEAMYFHEVDEKVWMNIVRVNLEGTTMVTRAVLPMMLERKRGAIINIGSGAAIVVPSH--PLYAIYAATKAYVDQLSRCLYVEYKQFGIDVQCQVPLYVATKMVKRVAAIEKATVFIPSAEDYAAAGVGRIGFEPRCTPYWAHSLQWFFV 322          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: XP_022945361.1 (very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 1.500e-40
Identity = 109/308 (35.39%), Postives = 176/308 (57.14%), Query Frame = 0
Query:   11 IKFILKRLVPILIVSFSFASYMELWDQPVRLLGFSLLAVWLVKFLNLALYFARVKLF---PRDPLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSG----NHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHAL 308
            +  ++K ++  +IV+ S    + +  QP+ LL FSLL   ++   + A+     + F   P+D   YG W IVTGAT GIG++FAY+LAS G+N+I+ISRS  KL+ V + I  + P   ++ I  D+T+ +   A  A + E  + L   +GIL+NNVG+      + H++D +    +L+VNV+GT   T+AV P +I + +GAI+N+ SG+     +H  P+ + YA+TKA++ QFS+ L  E ++ G+DV    P YV +    R     +A+   P+A   V+  +  +GY     PYW H+L
Sbjct:   26 LALLIKPIIHTMIVTCS----LLVSSQPIWLLVFSLLGFLIILQRSAAVVRWVYRAFLRSPKDLRRYGSWVIVTGATDGIGKSFAYQLASAGLNLILISRSSAKLKSVSEDIQSQFPDTNIKIIELDFTE-DDIGAGIAEIKEMIEDL--DVGILINNVGITYPNANFFHEVDEKVWMDVLKVNVKGTTWVTKAVLPKMIKKNRGAIVNIGSGAAVIVPSH--PLYAIYAATKAYVDQFSRSLHVEYKDRGIDVQCQVPLYVATEMASRVASVSRASLFIPSADDYVRAAIRRIGYEPRCTPYWSHSL 324          
BLAST of NO05G03460 vs. NCBI_GenBank
Match: EEF47580.1 (steroid dehydrogenase, putative [Ricinus communis])

HSP 1 Score: 176.0 bits (445), Expect = 2.000e-40
Identity = 103/290 (35.52%), Postives = 168/290 (57.93%), Query Frame = 0
Query:   34 LWDQPVRLLGFSLLAVWLVKFLNLALYFARVKLFPRD-PLSYGKWAIVTGATAGIGEAFAYELASRGMNVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSETCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTRAVAPFLIDQRKGAIINVSSGSG----NHPTPMISCYASTKAFITQFSQCLSHELREFGVDVLVVTPYYVISNQFRR----KKATYIAPTAQRMVQDTLPILGYCDVAYPYWFHALCGFFVGL 315
            LW   V  LGF  L+++   F  L   +  V   P++   +YG WA++TGAT GIG+AFA++LA +G+N+I++SR++ KL+ V   I +E P  +++ +  D++  E +     ++ E  K +   +G+L+NNVG+      +  ++D  T   +++VNV+GT R T AV   +I++R+GAI+N+ SG+     +H  P+ + YA+TKA+I Q S+CL  E R  G+DV    P YV +N   R    +K++   P+ Q   +  +  +GY     PYW H+L  FFV L
Sbjct:   13 LWLLIVSFLGF--LSLFNYSFTLLNWVYKTVLRQPKNLKENYGSWALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS-EDSSGLVHVIEEAIKGV--DVGVLINNVGITYPQARFFDEVDESTWMSVVKVNVKGTTRVTEAVLSGMIERRRGAIVNIGSGASIVVPSH--PLYTIYAATKAYIDQLSRCLYVEYRSCGIDVQCQVPLYVATNMTSRVALIEKSSLFIPSPQAYAEAAIRCIGYEARCTPYWAHSLQWFFVRL 295          
The following BLAST results are available for this feature:
BLAST of NO05G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28067.13.900e-16986.38estradiol 17-beta-dehydrogenase 12 [Nannochloropsi... [more]
EWM28226.11.200e-7748.13estradiol 17-beta-dehydrogenase 12-b [Nannochlorop... [more]
GBG26039.11.600e-4235.71Very-long-chain 3-oxoacyl-CoA reductase [Aurantioc... [more]
XP_004310011.13.600e-4235.84PREDICTED: very-long-chain 3-oxoacyl-CoA reductase... [more]
XP_004349964.11.400e-4137.00steroid dehydrogenase [Cavenderia fasciculata] >EG... [more]
XP_011042342.13.100e-4133.79PREDICTED: very-long-chain 3-oxoacyl-CoA reductase... [more]
XP_023323937.13.100e-4138.04very-long-chain 3-oxoacyl-CoA reductase-like [Eury... [more]
XP_021901263.14.000e-4135.79very-long-chain 3-oxoacyl-CoA reductase-like prote... [more]
XP_022945361.11.500e-4035.39very-long-chain 3-oxoacyl-CoA reductase-like prote... [more]
EEF47580.12.000e-4035.52steroid dehydrogenase, putative [Ricinus communis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR120ngnoR120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003518NSK003518Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G03460.1NO05G03460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584750gene_3155Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100044g17gene2506Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G03460.1NO05G03460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G03460 ID=NO05G03460|Name=NO05G03460|organism=Nannochloropsis oceanica|type=gene|length=1851bp
ACAGGAAACCAGCCCCCGCTTCTTCTGTGCCTACTGCCTTAACATCTGCT
TTGAGAAGGAACGCGGCCACTTTTCTCCACCACCAACCGCGCACCCTCGT
TTCCACGCTTCACCCTCACCTCCTTCGATCATGGCGTTGGACGTGAAGGA
GAAGAACTTGATCAAGTTCATTTTAAAGCGCCTCGTGCCGATTCTAATTG
TCTCTTTTTCCTTTGCCTCCTACATGGAGCTGTGGGACCAACCCGTCCGA
CTGCTGGGTTTTTCCCTGTTGGCTGTCTGGCTGGTGAAATTCCTGAACCT
GGCCCTGTATTTTGCGCGTGTCAAGCTTTTCCCTCGCGACCCTTTGTCGT
ACGGAAAGTGGGCCATTGTGACAGGTGCCACAGCAGGCATTGGTGAAGCT
TTTGCCTACGAGCTGGCTTCGCGTGGTATGAATGTTATAATTATCTCACG
TTCCATGGAAAAGCTGGAAGAGGTAAAGAAGGGCATTTTGAAAGAAACTC
CTGGGGTGGAGGTTCGGTGCATTGCCTATGACTACACGGATCGAGAAGGT
GCTGATGCCTTCTTTGCAATGTTGTCTGAGACGTGCAAGAGTTTGGTGGG
TGGTCTGGGCATTTTGGTGAATAACGTGGGGATGGTCAATGCGgtaagtc
ccgtgggaggagcaggagggatgaagggagggggatggagagcggaggga
gtctgtatggcgcctcatatttggggcatgcggatatccatcccattccg
gccaatgcccacgtttgctttagtcattcgttccacgcacacgcagtgag
ccaagcttttaaccctttttccctcccttcctttcccatcctacataccg
tccctccccatctcgtttccctagCTCCCGGAATACATGCACCAATTGGA
CGCGCGCACCACCTATGGCATCCTTCAAGTCAATGTCGAAGGGACCGTGC
GCACGACCCGGGCAGTCGCCCCTTTCCTGATCGATCAGCGCAAGGGTGCT
ATAATCAATGTCTCATCAGGTTCGGGGAATCACCCGACCCCAATGATCAG
CTGTTATGCGTCCACAAAGGCGTTTATCACCCAATTTTCCCAGTGCTTGT
CACATGAACTGAGAGAGTTTGGGGTGGATGTGTTGGTGGTCACCCCTTAC
TATGTGATCTCCAATCAATTTCGACGGAAGAAGGCGACCTACATCGCACC
TACGGCCCAGCGGATGGTCCAAGACACTCTGCCCATCTTGGGTTACTGCG
ACGTGGCTTACCCTTACTGGTTTCACGCCCTATGCGGGTTCTTTGTGGGG
TTGTATTGGGATGTGGGAGGGTCGGTGATGGCTGCCATGCGGAGGAATCG
TGCTCGGATTATGGAGGCGGCGGCGGCCAAGAAGGGAAAGGGGGAGTAAG
ATATGGAGTGGAAATCAGATAGAGATATAACTAGGGAGGGGTCACCGGCA
GTAGCGGCGGGTGTATAAAAGGCAACGGGGAAAGGGAGAAAAGGAAAAAA
GAGAAGGATGAAAAAAGGATGGTTATGATGAAAGCAGGGAGACAGAGATC
AAGAGAGTGAGCAGACAAAGAGTAGCAAGCGATAGCTAGGACGATGACGA
TGATGATGACGGCGGACAGTCGACGGACGAGCAGGACTGCCGCCAGCAGA
GTCGCCTGTGCTCTATTTTGTTTGTGTATGTCAGAAAGATTGTCGGATTG
GGGTGGGGATAGTGTCGTGCATGTCCGTCTCTTCTCCTCCGTCTTGTTTG
ACCTTACATGTGTACCATCAAAGCAGGAACATCGTTAGCAGCAAAATGAA
AGAATAAAACGAAGGGGGAAAAGAAGTAAGGAAGAAATTATGGCAAAAAC
G
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protein sequence of NO05G03460.1

>NO05G03460.1-protein ID=NO05G03460.1-protein|Name=NO05G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bp
MALDVKEKNLIKFILKRLVPILIVSFSFASYMELWDQPVRLLGFSLLAVW
LVKFLNLALYFARVKLFPRDPLSYGKWAIVTGATAGIGEAFAYELASRGM
NVIIISRSMEKLEEVKKGILKETPGVEVRCIAYDYTDREGADAFFAMLSE
TCKSLVGGLGILVNNVGMVNALPEYMHQLDARTTYGILQVNVEGTVRTTR
AVAPFLIDQRKGAIINVSSGSGNHPTPMISCYASTKAFITQFSQCLSHEL
REFGVDVLVVTPYYVISNQFRRKKATYIAPTAQRMVQDTLPILGYCDVAY
PYWFHALCGFFVGLYWDVGGSVMAAMRRNRARIMEAAAAKKGKGE*
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Synonyms
Publications