NO05G03430, NO05G03430 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03430 vs. NCBI_GenBank
Match: EWM28051.1 (fungal specific transcription [Nannochloropsis gaditana]) HSP 1 Score: 282.3 bits (721), Expect = 2.700e-72 Identity = 160/338 (47.34%), Postives = 209/338 (61.83%), Query Frame = 0
Query: 131 SSNTXXXINSSSIKDIPSHTTTFTISSTSMMLDRYPPPWDLVTVLHAAPGLRCYDHCRMAAIIYGETAQCMVTTRQLQYGKTLAILRTWDLYSYRHGFEITCGASEMITRILAILRVQANENGATVXXXXXXXXXXXGSMLGLEFPVERNEELLTMDREKALNPANMPPYVARLRDGGGGDLAVAGFVYCSGEFRLWTCDSFASKFFSAGAANKRFEEMRILPSYLFGPIFSPNDRPIFYRNLMEYLLKPTDETKEMNMIAETMERDGRLHRSFVRARYMVLNEGQYACFALSILPIPGMPSRYGMTASFAPLPTSSSSSSISPLASTNGFVASPSAA 469
SS T NSSS +H +S MM D PP W L+ VL PGLR YDHC+ A ++GET M+ T +LQ+ KTLAILRTWD Y+++HG +I+CGAS I R+LA+ + A +G+ E PVE N++LL MDR+ AL+ A+MP YV+ L+D GGD AV G+VYCSG++RLWT FA +F +A N F++ +ILP +LFG +PNDRP FYR+L+EY+L PT E +EM + A+ ME DG + ++ VRARYMVLNEGQY+CFALS L IPG+P R F P PT SS S A + A P +
Sbjct: 552 SSCTTEATNSSSHGGSKAH------ASIVMMPDGGPPSWALMAVLQPPPGLRYYDHCKTTAPLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCGASAAIVRVLALRKSAAYTSGS--------GESSESVGTNAEQPVEWNDDLLAMDRQDALDQAHMPSYVSSLQD--GGDSAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSLFDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVMELDGHVFKALVRARYMVLNEGQYSCFALSFLQIPGLPVR------FVP-PTIHPSSIASAAADQSRSDACPDVS 866
BLAST of NO05G03430 vs. NCBI_GenBank
Match: EWM29550.1 (hypothetical protein Naga_100006g18 [Nannochloropsis gaditana] >EWM29551.1 hypothetical protein Naga_100006g18 [Nannochloropsis gaditana]) HSP 1 Score: 175.6 bits (444), Expect = 3.500e-40 Identity = 102/268 (38.06%), Postives = 142/268 (52.99%), Query Frame = 0
Query: 163 DRYPPPWDLVTVLHAAPGLRCYDHCRMAAIIYGETAQCMVTTRQLQYGKTLAILRTWDLYSYRHGFEITCGASEMITRILAILRVQANENGATVXXXXXXXXXXXGSMLGLEFPVERNEELLTMDR--EKALNPANMPPYVARL-RDGGGGDLAVAGFVYCSGEFRLWTCDSFASKFFSAGAANKRFEEMRILPSYLFGPIFSPNDRPIFYRNLMEYLLKPTDETKEMNMIAETMERDGRLHRSFVRARYMVLNEGQYACFALSILPI 428
D PP W LV L +APGL HCR+AA + + +LQ+ K ILR WD+Y YR ++TCGA + RILA G + + ++ N + DR E+ L+P +MP YV RL + AV G+ Y +G F+LWT FA K+++A AN RF + +LP YL+G +F P DRP FY L+EYLL DE + + M+AE + DG V+AR+ V+N+GQY FA+S LP+
Sbjct: 6 DGGPPGWALVGELQSAPGLDRLSHCRLAATTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILA-------------------SPIPHGVPICYQASLQENISMYD-DRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO05G03430 vs. NCBI_GenBank
Match: XP_005852521.1 (hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526] >EKU23311.1 hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 174.5 bits (441), Expect = 7.900e-40 Identity = 101/268 (37.69%), Postives = 142/268 (52.99%), Query Frame = 0
Query: 163 DRYPPPWDLVTVLHAAPGLRCYDHCRMAAIIYGETAQCMVTTRQLQYGKTLAILRTWDLYSYRHGFEITCGASEMITRILAILRVQANENGATVXXXXXXXXXXXGSMLGLEFPVERNEELLTMDR--EKALNPANMPPYVARL-RDGGGGDLAVAGFVYCSGEFRLWTCDSFASKFFSAGAANKRFEEMRILPSYLFGPIFSPNDRPIFYRNLMEYLLKPTDETKEMNMIAETMERDGRLHRSFVRARYMVLNEGQYACFALSILPI 428
D PP W LV L +APGL HCR+A+ + + +LQ+ K ILR WD+Y YR ++TCGA + RILA G + + ++ N + DR E+ L+P +MP YV RL + AV G+ Y +G F+LWT FA K+++A AN RF + +LP YL+G +F P DRP FY L+EYLL DE + + M+AE + DG V+AR+ V+N+GQY FA+S LP+
Sbjct: 6 DGGPPGWALVGELQSAPGLDRLSHCRLASTTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILA-------------------SPIPHGVPICYQASLQENISMYD-DRPIEEKLSPHHMPEYVLRLCMESRKEGAAVCGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPL 253
BLAST of NO05G03430 vs. NCBI_GenBank
Match: EWM25637.1 (hypothetical protein Naga_100037g11 [Nannochloropsis gaditana] >EWM25638.1 hypothetical protein Naga_100037g11 [Nannochloropsis gaditana]) HSP 1 Score: 137.5 bits (345), Expect = 1.100e-28 Identity = 93/297 (31.31%), Postives = 140/297 (47.14%), Query Frame = 0
Query: 169 WDLVTVLHAAPGLRCYDHCRMAAIIYGETAQCMVTTRQLQYGKTLAILRTWDLYSYRHGFEITCGASEMITRILAILRVQANENGATVXXXXXXXXXXXGSMLGLEFPVERNEELLTMDREKALNPANMPPYVARLRDGGGGDLAVAGFVYCSGEFRLWTCDSFASKFFSAGAANKRFEEMRILPSYLFGPIFSPNDRPIFYRNLMEYLLKPTDETKEMNMIAETMERDGRLHRSFVRARYMVLNEGQYACFALSILPIPGMPSRYGMTASFAPLPTSSSSSSISPLASTNGFVASP 466
W L L GL YDHC +AA + + A + +LQ+ K LAI+RTW+ + + TCG + ++ R+LA +G + + + L + +K + P NMP V LR+ GFV+ G FR+WT D F++++ S N + +LP + FG IFSP R FY + E++L + E +M++ET+ RDGRL + V RY +LN GQ + FA+++ P+ Y A + TS S S S L ST SP
Sbjct: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLA----SPTPSGVDCIP---------------QVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVS--MSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPL-----EYSNAAVHDSIATSVSFS--STLISTPQLSLSP 286
BLAST of NO05G03430 vs. NCBI_GenBank
Match: EWM29539.1 (hypothetical protein Naga_100006g24 [Nannochloropsis gaditana]) HSP 1 Score: 134.8 bits (338), Expect = 6.900e-28 Identity = 88/273 (32.23%), Postives = 137/273 (50.18%), Query Frame = 0
Query: 184 YDHCRMAAIIYGETAQCMVTTRQLQYGKTLAILRTWDLYSYRHGFEITCGASEMITRILAILRVQANENGATVXXXXXXXXXXXGSMLGLEFPVERNEELLTMDREKALNPANMPPYVARLRDGGGGDLAVAGFVYCSGEFRLWTCDSFASKFFSAGAANKRFEEMRILPSYLFGPIFSPNDRPIFYRNLMEYLLKPTDETKEMNMIAETMERDGRLHRSFVRARYMVLNEGQYACFALSILPIPGMPSRYGMTASFAPLPTSSSSSSISPLA 457
Y+ A + +G + T+ +LQ+ + LAI+ TWD S +++CGA+ +I R LA L N A+ L+ PV + + L ++P +VA L +G A GF+Y GEFR+WT +F++++F A AN + +LP YLFG I + F+ L ++LK E K M+M+A+T+ RD + ++ +R RY+V N G YAC AL++LPI G +P T S+ SS+ P A
Sbjct: 62 YECSSEAVLTFGRVTARLKTSGELQHERALAIIHTWDTTSRAQRVDVSCGAANLILRALASL----NSTYASPV---------------LQVPVRFGTSVACCPAGELLEGVHVPAFVAELDEGATS--ASCGFIYTGGEFRIWTDLNFSARYFDAEEANVYHIQAGVLPCYLFGCIIHRTYQEQFFDRLAVHMLKDNTEEKTMSMVAQTLGRDQVVTQNLLRIRYVVRNSGHYACLALNVLPI----DYPGAMNGESPAATPSALSSVMPPA 309 The following BLAST results are available for this feature:
BLAST of NO05G03430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03430 ID=NO05G03430|Name=NO05G03430|organism=Nannochloropsis oceanica|type=gene|length=1410bpback to top protein sequence of NO05G03430.1 >NO05G03430.1-protein ID=NO05G03430.1-protein|Name=NO05G03430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bpback to top Synonyms
Publications
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