NO05G03260, NO05G03260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G03260 vs. NCBI_GenBank
Match: EWM28046.1 (pyridoxamine 5-phosphate oxidase, putative [Nannochloropsis gaditana]) HSP 1 Score: 445.7 bits (1145), Expect = 1.400e-121 Identity = 237/359 (66.02%), Postives = 272/359 (75.77%), Query Frame = 0 Query: 1 MRSRTHLVQLLLASISHSS-------KASRPLHHHSITFLTPSLSWGSLRVLSSSATLAVAAATRKEEATTPSRSR-GTCRSFSIGPVHSNSNIAMEPSSDPSSPS-PPFFSWRQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGWDEEGAEGGGRE 351 MRSRT L+Q L+AS+S SS + P H ++ F+T SL+WGS+R +SSS TLA A++ A + GTCRSFS P+HS+SN DP S SWRQRITLLTQKEAQAIDEELM TPGFSVDQLMELAGLSV+ A+ FL QP RSASILILCGPGNNGGDGLVAARHL+H GY PVVVYPKR +PLF NLVKQCEDLG+ VGV++P DIE +FDCV+DALFGFGT G LRAPF +MQ L+++TTPIVSVDIPSGWDVE GDVY T F P+ALVSLTAPK+CAA FRGRHYLGGRFVPP ++ QY LD LPAY G Q VEIEGWDEEG + G ++ Sbjct: 1 MRSRTPLLQFLVASVSSSSSFAAGPTSHAHPRPHQALAFVTHSLAWGSIRAISSSITLASASSVGDLPAALNEGGKGGTCRSFSGVPLHSDSN--SNNMGDPCKGSDAAVSSWRQRITLLTQKEAQAIDEELMGTPGFSVDQLMELAGLSVASAIHDFLAQPTRSASILILCGPGNNGGDGLVAARHLYHFGYRPVVVYPKRPARPLFTNLVKQCEDLGIHVGVDMPEDIEAKFDCVVDALFGFGTAGPLRAPFGEMMQVLSKLTTPIVSVDIPSGWDVEAGDVYGTGFTPDALVSLTAPKKCAALFRGRHYLGGRFVPPGLQHQYGLDA--LPAYPGTCQCVEIEGWDEEGGDEGDKD 355
BLAST of NO05G03260 vs. NCBI_GenBank
Match: PKY47682.1 (NAD(P)H-hydrate epimerase [Rhizophagus irregularis]) HSP 1 Score: 250.8 bits (639), Expect = 6.600e-63 Identity = 128/232 (55.17%), Postives = 163/232 (70.26%), Query Frame = 0 Query: 108 ITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELP-GDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITT--PIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 + LTQK AQAIDEEL S+ GFSVDQLMELAGLSV+ A+ + ++ + +LI CGPGNNGGDGLVAARHLFH GY P + YPK+S K L+ LV QC+ L + + EL + D ++DALFGF G +R PFD ++Q+L ++T PIVSVDIPSGWDVE+G+V + P L+SLTAPK CA +F G+H+LGGRFVPP +K +Y L +LP Y G Q V+I Sbjct: 3 LKFLTQKIAQAIDEELFSSGGFSVDQLMELAGLSVAQAITK-VYDNSKYSRVLICCGPGNNGGDGLVAARHLFHFGYKPNIFYPKQSKKELYERLVIQCQSLEIPIVTELSNSSLTNDNDLIVDALFGFSFTGEIRPPFDEVIQKL-KVTNIPPIVSVDIPSGWDVEKGNVNNHGLKPSMLISLTAPKLCANYFNGKHFLGGRFVPPGLKEKYEL---NLPLYPGTDQVVDI 229
BLAST of NO05G03260 vs. NCBI_GenBank
Match: EXX66829.1 (NADHX epimerase [Rhizophagus irregularis DAOM 197198w] >GBC26355.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis DAOM 181602] >PKC11372.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKC62297.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKK65276.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis] >PKY18998.1 NAD(P)H-hydrate epimerase [Rhizophagus irregularis]) HSP 1 Score: 250.4 bits (638), Expect = 8.600e-63 Identity = 127/232 (54.74%), Postives = 163/232 (70.26%), Query Frame = 0 Query: 108 ITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELP-GDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITT--PIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 + LTQK AQAIDEEL S+ GFSVDQLMELAGLSV+ A+ + ++ + +LI CGPGNNGGDGLVAARHLFH GY P + YPK+S K L+ LV QC+ L + + EL + D ++DALFGF G +R PFD ++Q+L ++T PIVSVDIPSGWDVE+G+V + P L+SLTAPK CA +F G+H+LGGRF+PP +K +Y L +LP Y G Q V+I Sbjct: 3 LKFLTQKIAQAIDEELFSSGGFSVDQLMELAGLSVAQAITK-VYDNSKYSRVLICCGPGNNGGDGLVAARHLFHFGYKPNIFYPKQSKKELYERLVIQCQSLEIPIVTELSNSSLTNDNDLIVDALFGFSFTGEIRPPFDEVIQKL-KVTNIPPIVSVDIPSGWDVEKGNVNNHGLKPSMLISLTAPKLCANYFNGKHFLGGRFIPPGLKEKYEL---NLPLYPGTDQVVDI 229
BLAST of NO05G03260 vs. NCBI_GenBank
Match: CBN77089.1 (pyridoxamine 5-phosphate oxidase, putative [Ectocarpus siliculosus]) HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62 Identity = 133/252 (52.78%), Postives = 172/252 (68.25%), Query Frame = 0 Query: 95 SSPSPPFFSWRQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEV--GVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI-TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGWDEE 343 SS PP S I+LLT +++ A+D +LMSTPGFS+DQLMELAGLSV+ A+ P+R +LI+CGPGNNGGDGLVAARHL+ GY P +YPK + + LF NLV+QC+ L +E E GD+ G +D V+DA+FGFG KG R PFD I++ L++ TP+VSVD+PSGW V++GD PE L+SLTAPK A FF G H+LGGRFVPP + +Y L+ LPAY G Q V +E W ++ Sbjct: 3 SSQPPPSSS---GISLLTAEDSAALDADLMSTPGFSIDQLMELAGLSVACAIAKVYPPPSR---VLIVCGPGNNGGDGLVAARHLWQFGYRPTCLYPKPTARQLFTNLVEQCKQLDIEFLPSWEAAGDL-GSYDVVLDAMFGFGFKGDPRPPFDTILKDLSKSGATPVVSVDVPSGWSVDEGDSKGGGLKPEMLISLTAPKLSARFFEGPHHFLGGRFVPPGIASKYSLE---LPAYPGSEQCVRLEEWGQQ 244
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_009040248.1 (hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens] >EGB05122.1 hypothetical protein AURANDRAFT_31365 [Aureococcus anophagefferens]) HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62 Identity = 134/236 (56.78%), Postives = 165/236 (69.92%), Query Frame = 0 Query: 105 RQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPV-VVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIEGW 340 R+ +TLL Q+ A A+D +LM +PGFS+DQLMELAGLSV+ AV PA + ILI+ GPGNNGGDGLVAARHL+H G V VVYPKR ++PLF NLVKQCEDL + V +P D G FD V+DA+FGF G RAPFD I++ L +TP+VSVD PSGW VE G P+ LVSLTAPK+CA+ F GRHY+GGRFVPP++ +Y L+ LP Y G Q +E+ W Sbjct: 7 RKGVTLLGQEAAIALDVDLMESPGFSIDQLMELAGLSVACAVRD--AYPA-ADGILIVAGPGNNGGDGLVAARHLWHFGARNVRVVYPKRPDRPLFRNLVKQCEDLRIPVEDAMP-DTAG-FDVVLDAVFGFSFYGEPRAPFDEILRDLERTSTPLVSVDTPSGWHVEDGPTGPVKLAPDVLVSLTAPKKCASHFAGRHYVGGRFVPPRVAEKYGLE---LPPYLGASQILELPNW 234
BLAST of NO05G03260 vs. NCBI_GenBank
Match: GAX14512.1 (hypothetical protein FisN_11Hu025 [Fistulifera solaris]) HSP 1 Score: 245.0 bits (624), Expect = 3.600e-61 Identity = 126/251 (50.20%), Postives = 169/251 (67.33%), Query Frame = 0 Query: 109 TLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQ----PARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGVELPGDIE---GRFDCVIDALFGFGTKGALRAPFDAIMQRL--TEITTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRGRHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEIE------GWDEEGA 345 T L+ A A+D ELMS PGF+++QLMELAGL+V+ AV +++ P IL++CGPGNNGGDGLVAARHL GY V+VYPKRS+K FVNL KQCED+G+ V +P D E G + ++D++FGF G R PFD+I+ RL + + +VSVD+PSGWDV++GDV F P+ L+SLTAPK CA F+GRH++GGRFVPP ++ +Y+ +P Y G Q VE++ GW+ E A Sbjct: 54 TYLSAAAAAALDAELMSEPGFTLEQLMELAGLAVAEAVYTVVEERRPSPQIKPKILVICGPGNNGGDGLVAARHLVLFGYECVIVYPKRSSKQHFVNLQKQCEDMGIAVLNGMPDDFEDRSGEYAAIVDSIFGFSFHGEPRVPFDSILLRLKKAQDSALVVSVDVPSGWDVDEGDVGGFGFSPQVLISLTAPKGCAKKFKGRHFVGGRFVPPYLEEKYQF---RMPKYPGTSQVVELKRVPKYTGWEAEYA 301
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466182.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60 Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0 Query: 106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 + I+ L+Q+EA +DE LM + GFSVDQLMELAGLSV+ +V + + + +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+ LV Q E L V +LP D+ FD +IDA+FGF GA R PFD ++QRLT + + IVSVDIPSGW VE+GD+ +SF P+ LVSLTAPK CA F G H+LGGRFVPP + +Y L HLP Y G V I Sbjct: 71 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 309
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466183.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60 Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0 Query: 106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 + I+ L+Q+EA +DE LM + GFSVDQLMELAGLSV+ +V + + + +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+ LV Q E L V +LP D+ FD +IDA+FGF GA R PFD ++QRLT + + IVSVDIPSGW VE+GD+ +SF P+ LVSLTAPK CA F G H+LGGRFVPP + +Y L HLP Y G V I Sbjct: 71 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 309
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_008466184.1 (PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X3 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 2.300e-60 Identity = 129/243 (53.09%), Postives = 161/243 (66.26%), Query Frame = 0 Query: 106 QRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVEVGV--ELPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEI---------TTPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 + I+ L+Q+EA +DE LM + GFSVDQLMELAGLSV+ +V + + + +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+ LV Q E L V +LP D+ FD +IDA+FGF GA R PFD ++QRLT + + IVSVDIPSGW VE+GD+ +SF P+ LVSLTAPK CA F G H+LGGRFVPP + +Y L HLP Y G V I Sbjct: 5 EAISYLSQREAAEVDEILMGSLGFSVDQLMELAGLSVATSVAE-VYKASEYKRVLVICGPGNNGGDGLVAARHLFHFGYKPSICYPKRTAKPLYTGLVTQLESLSVPFLTVDDLPLDLSKDFDIIIDAIFGFSFHGAPRPPFDDLIQRLTSLNDYKEANQRSPAIVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKKFNGPHHFLGGRFVPPSIVNKYNL---HLPPYPGTAMCVRI 243
BLAST of NO05G03260 vs. NCBI_GenBank
Match: XP_023524155.1 (pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 3.000e-60 Identity = 130/244 (53.28%), Postives = 160/244 (65.57%), Query Frame = 0 Query: 105 RQRITLLTQKEAQAIDEELMSTPGFSVDQLMELAGLSVSHAVDHFLQQPARSASILILCGPGNNGGDGLVAARHLFHLGYCPVVVYPKRSNKPLFVNLVKQCEDLGVE-VGVE-LPGDIEGRFDCVIDALFGFGTKGALRAPFDAIMQRLTEIT---------TPIVSVDIPSGWDVEQGDVYHTSFMPEALVSLTAPKRCAAFFRG-RHYLGGRFVPPKMKVQYRLDEEHLPAYQGIRQFVEI 337 R+ I+ LTQKEA +DE LM GFSVDQLMELAGLSV+ ++ + + +L++CGPGNNGGDGLVAARHLFH GY P + YPKR+ KPL+ LV Q E L V V VE LP D+ FD +IDA+FGF GA R PF+ ++QRL + +VSVDIPSGW VE+GD+ +SF P+ LVSLTAPK CA F G H+LGGRFVPP + ++ L HLP Y G V I Sbjct: 4 RESISYLTQKEAAEVDEILMGPLGFSVDQLMELAGLSVATSIAE-VYKVDEYKRVLVICGPGNNGGDGLVAARHLFHFGYNPSICYPKRTPKPLYAGLVTQLESLSVPFVSVEDLPSDLSKDFDIIIDAIFGFSFHGAPRPPFNDLIQRLVSLNEYKEAKQRFPVVVSVDIPSGWHVEEGDISDSSFKPDMLVSLTAPKLCAKRFHGPHHFLGGRFVPPSIVSKFNL---HLPPYPGTAMCVRI 243 The following BLAST results are available for this feature:
BLAST of NO05G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G03260 ID=NO05G03260|Name=NO05G03260|organism=Nannochloropsis oceanica|type=gene|length=3401bpback to top protein sequence of NO05G03260.1 >NO05G03260.1-protein ID=NO05G03260.1-protein|Name=NO05G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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