NO05G03140, NO05G03140 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G03140
Unique Name	NO05G03140
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1827
Alignment location	chr5:814822..816648 -

Link to JBrowse

Properties


Property Name	Value
Description	Suppressor of g2 allele of skp1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:814822..816648 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008978	HSP20-like_chaperone
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR007699	SGS
IPR007052	CS_dom
IPR019734	TPR_repeat

Homology

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: EWM28086.1 (suppressor of g2 allele of skp1 [Nannochloropsis gaditana])

HSP 1 Score: 398.3 bits (1022), Expect = 2.700e-107
Identity = 217/390 (55.64%), Postives = 267/390 (68.46%), Query Frame = 0

Query:    1 MEQAQQAFIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEE---------GVKEXXXXXXXXXXXXXXPLTTLKPT--TAAALSMPV-QPKYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGNDGSTVLLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLSASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            MEQAQ AF+DE++A A+EL++ Y+ THPDD  AL SRAAV+LKL++P QA+ DA  AA+LK DLEVAWYRQG+AAFALEDF+RAK AFM G+ LLG+  EP+GR+Y  WLRK  +E+ E +E         G+KE              P +   PT   ++A ++P    K+Q+YQT +++TVT+L KGL+E +A+V +QPR L +        L  R LFE V+PEES    FATKVE+KL+K  EGL WP+L A S S  AASV                           SKPLRPYAS KDWGAVE+EI+KELESEKP G+EALN LF+DIY+  SD+TRRAMVKS+QTSGGTVLSTNW EV  KDYEK+EERKAPEGMEWRKWG
Sbjct:    1 MEQAQLAFMDEDYATADELFSAYIATHPDDATALVSRAAVHLKLNQPSQALHDAEAAASLKSDLEVAWYRQGVAAFALEDFSRAKEAFMRGRALLGDRPEPQGRRYDVWLRKTTLELGEHDEQGMTVVAEGGIKELRQEQGAKGIEATVPRSQPSPTHPPSSAPAIPAGHVKFQFYQTTSYVTVTILYKGLREEDANVSVQPRHLKVSVGADGDALFDRALFETVVPEESTSKIFATKVEVKLRKAMEGLTWPELCALSPSA-AASVHTVSAPTPDSHATALPSLAQGPATAPSSKPLRPYASTKDWGAVEKEISKELESEKPEGDEALNTLFRDIYAKGSDETRRAMVKSFQTSGGTVLSTNWEEVGKKDYEKEEERKAPEGMEWRKWG 389

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: XP_008902515.1 (hypothetical protein PPTG_09337 [Phytophthora parasitica INRA-310] >ETI51543.1 hypothetical protein F443_05134 [Phytophthora parasitica P1569] >ETK91442.1 hypothetical protein L915_04996 [Phytophthora parasitica] >ETL44852.1 hypothetical protein L916_04944 [Phytophthora parasitica] >ETM51168.1 hypothetical protein L914_04951 [Phytophthora parasitica] >ETN12557.1 hypothetical protein PPTG_09337 [Phytophthora parasitica INRA-310] >ETP21331.1 hypothetical protein F441_05134 [Phytophthora parasitica CJ01A1] >ETP49257.1 hypothetical protein F442_05192 [Phytophthora parasitica P10297])

HSP 1 Score: 244.2 bits (622), Expect = 6.500e-61
Identity = 151/384 (39.32%), Postives = 214/384 (55.73%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT---TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDL------SASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   YT  L   P D  AL+ RAA YLKL+K  +A+ DA++A+ L P L +   R G+A F LE +A AK AF  GK    +  E   +++ TW+RK   E++  +E +                P+ T  P+    A    +P++P  ++ +YQ+ TH+TV++LQK L + +  V I+P++L ++   DG         LF+ VIP+ES      +KVE+KLKK + G+ W  L      S +   T  A+V                            +  RPYAS +DW  +E+ I  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEEL---------VIPDDPVPMQTSAPSNQGAAVVAPLPMKPTIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPAAV----------------------FEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: ETL98007.1 (hypothetical protein L917_04843 [Phytophthora parasitica])

HSP 1 Score: 244.2 bits (622), Expect = 6.500e-61
Identity = 151/384 (39.32%), Postives = 214/384 (55.73%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT---TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDL------SASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   YT  L   P D  AL+ RAA YLKL+K  +A+ DA++A+ L P L +   R G+A F LE +A AK AF  GK    +  E   +++ TW+RK   E++  +E +                P+ T  P+    A    +P++P  ++ +YQ+ TH+TV++LQK L + +  V I+P++L ++   DG         LF+ VIP+ES      +KVE+KLKK + G+ W  L      S +   T  A+V                            +  RPYAS +DW  +E+ I  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTHALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEEL---------VIPDDPVPMQTSAPSNQGAAVVAPLPMKPMIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPAAV----------------------FEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: ETO80304.1 (hypothetical protein F444_05171 [Phytophthora parasitica P1976])

HSP 1 Score: 243.8 bits (621), Expect = 8.500e-61
Identity = 150/384 (39.06%), Postives = 214/384 (55.73%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT---TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDL------SASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   YT  L   P D  AL+ RAA YLKL+K  +A+ DA++A+ L P L +   R G+A F LE +A AK AF  GK    +  E   +++ TW+RK   E++  +E +                P+ T  P+    A    +P++P  ++ +YQ+ TH+TV++LQK L + +  V I+P++L ++   DG         LF+ VIP+ES      +KVE+KLKK + G+ W  L      S +   T  A+V                            +  RPYAS +DW  +E+ +  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW++WG
Sbjct:   11 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRAFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEEL---------VIPDDPVPMQTSAPSNQGAAVVAPLPMKPMIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPAAV----------------------FEAKPEQVPRPYASSRDWNQIEKTVGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 361

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: KUF87749.1 (SGT1 A protein [Phytophthora nicotianae])

HSP 1 Score: 242.7 bits (618), Expect = 1.900e-60
Identity = 150/384 (39.06%), Postives = 213/384 (55.47%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT---TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDL------SASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   YT  L   P D  AL+ RAA YLKL+K  +A+ DA++A+ L P L +   R G+A F LE +A AK  F  GK    +  E   +++ TW+RK   E++  +E +                P+ T  P+    A    +P++P  ++ +YQ+ TH+TV++LQK L + +  V I+P++L ++   DG         LF+ VIP+ES      +KVE+KLKK + G+ W  L      S +   T  A+V                            +  RPYAS +DW  +E+ I  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW++WG
Sbjct:  542 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRVFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEEL---------VIPDDPVPMQTSAPSNQGAAVVAPLPMKPTIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPAAV----------------------FEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 892

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: CBN79827.1 (SGT1 homologue [Ectocarpus siliculosus])

HSP 1 Score: 241.9 bits (616), Expect = 3.200e-60
Identity = 168/404 (41.58%), Postives = 234/404 (57.92%), Query Frame = 0

Query:    1 MEQAQQAFIDEEFARAEELYTVYLTTHPD-DVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGE-GTEPEGRKYATWLRKVAVEME----------------------EGEEGVKEXXXXXXXXXXXXXXPLTTLKPTTAAALSMPVQPKYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIK---GNDGSTVLLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLSASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKW 378
            + +  QAFIDE++    + Y   ++   + + +A ++RAAVYLKL K  +A+QDA+ A  L P  E+A+YR+GLAAFALE+F  A  AF +GK+L  E G   + RKY TW+RK   E+E                              XXXXXXXXXXXXXXP+       ++     ++ K+QYYQ+   +TV +L+KGLKE E  V ++ ++LT++   G++   +L  + L+E V+PE+    F A+K+E+ + K +    WP+L         A++P                          +K  RPY+S KDW  VE+E+ KELE+EKP GE+ALN LFK IY  A +DTRRAMVKS+QTSGGTVLSTNW EV   DYEK  ER+AP+GMEW+ W
Sbjct:    8 IHKGNQAFIDEDYPATLQAYGEAISLGGEGEALARSNRAAVYLKLSKHTEALQDASAAVKLMP-TEMAFYRKGLAAFALEEFETALEAFRQGKKLEEERGDSNDPRKYRTWVRKCEAELEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKRTPVPASSTAPAHLRIKFQYYQSYEKVTVAVLEKGLKESEVKVDVEAKRLTVRRKAGDNAGALLFDKVLYEEVLPEKCRTRFMASKLEVTMTKKSPA-DWPEL-------EGAAIPAARPAAAATATDASSTSGEAAVEQPPTKVARPYSSTKDWDVVEKEVQKELEAEKPGGEQALNDLFKSIYGKADEDTRRAMVKSFQTSGGTVLSTNWDEVGKADYEK--ERQAPKGMEWKTW 400

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BLAST of NO05G03140 vs. NCBI_GenBank
Match: OQR95352.1 (hypothetical protein THRCLA_07948 [Thraustotheca clavata])

HSP 1 Score: 237.3 bits (604), Expect = 8.000e-59
Identity = 143/372 (38.44%), Postives = 205/372 (55.11%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPTTAAALSMPVQPKYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIK-GNDGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLSASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKW 378
            F++EE+  A   YT  L   P+D  AL+ RAA YLKL++   A+QDA  A  L P L +A+ R+G A F LE F  AK +F  GK+  G      G K+  W+RK   E+E+ +E + E                  + P  A  +      ++++YQTPTH+T++LLQK LK  + +V   P  L ++   +G T+   ++QL+ A+  +ES       KVEI+LKK   G  W  L     +    ++P                          + P +PYAS++DW  +++ I +ELE+EKP GE A+ KLF DIY+ A +DTRRAM KS+QTSGGTVLSTNW EVA K+YE  +E+ AP+GM+W+KW
Sbjct:   10 FVEEEYEEAVRAYTQALMEKPNDADALSKRAAAYLKLNQLESAVQDAQNAIQLDPTLLMAYLREGTALFGLERFREAKTSFGIGKEKAGNRDMILG-KFKMWIRKCDAELEDEDEEMTEKTETFATKPAAQDPAPAPIAPVAAPTV------RHEWYQTPTHVTLSLLQKNLKSEDVTVDFSPNHLHVRFPVNGETIDAFQKQLYGAIDVQESSFRVSTVKVEIRLKKANAGFMWDKLEGQGLAAPTGAIP-------------------RPSPAVFAAPPKPYASNRDWNKIDKTIAEELEAEKPEGESAMQKLFADIYAKADEDTRRAMNKSFQTSGGTVLSTNWKEVAAKNYE--DEKPAPDGMQWKKW 353

[Close]

BLAST of NO05G03140 vs. NCBI_GenBank
Match: XP_009526808.1 (hypothetical protein PHYSODRAFT_498024 [Phytophthora sojae] >EGZ17750.1 hypothetical protein PHYSODRAFT_498024 [Phytophthora sojae])

HSP 1 Score: 236.5 bits (602), Expect = 1.400e-58
Identity = 149/373 (39.95%), Postives = 202/373 (54.16%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPTTAAALSMPVQPKYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLSASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   Y+  L T P D  AL+ RAA +LKL K  +A  DA++A  L   L +A  R G+A F LE +A AK AF  GK+   +G E   +++ TW+RK   E++   E                  P+  L P   +A  +   P      + TH+TV++LQK L + +  V ++P++L ++   DG  V      LF+ ++P ES      TKVE+KLKK + G+ W  L      T    V                           S P RPYAS +DW  +ER I +ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW+KWG
Sbjct:  532 FVDEAYEEAARCYSRALETQPQDADALSKRAAAFLKLHKLREAAADASRATELDATLHMAHLRHGVAQFELEKYAEAKRAFQRGKEAAPKGNEALLKRFQTWIRKCDAELDSDGEA--------ELVIPDDPAPVKALTPNNQSAAVVAPLP------SGTHVTVSILQKKLAQEDVEVTMEPKKLLVRVKLDGEVVEAFNEALFDEIVPAESSYKVLGTKVELKLKKNSNGMHWDKLEEVVYQTGTQVV---------------TGPAAVFEAKPESVP-RPYASARDWNQIERAIGEELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVADKDYEK--ERTAPNGMEWKKWG 872

[Close]

BLAST of NO05G03140 vs. NCBI_GenBank
Match: KUF98456.1 (E3 ubiquitin-protein ligase Mdm2 [Phytophthora nicotianae])

HSP 1 Score: 232.3 bits (591), Expect = 2.600e-57
Identity = 150/395 (37.97%), Postives = 212/395 (53.67%), Query Frame = 0

Query:    8 FIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT---TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGN-DGSTV-LLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDL------SASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSY-----------QTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            F+DE +  A   YT  L   P D  AL+ RAA YLKL+K  +A+ DA++A+ L P L +   R G+A F LE +A AK  F  GK    +  E   +++ TW+RK   E++  +E +                P+ T  P+    A    +P++P  ++ +YQ+ TH+TV++LQK L + +  V I+P++L ++   DG         LF+ VIP+ES      +KVE+KLKK + G+ W  L      S +   T  A+V                            +  RPYAS +DW  +E+ I  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS            QTSGGTVLSTNW EVA+KDYEK  ER AP GMEW++WG
Sbjct:  542 FVDEAYEEAVRSYTRALEKQPQDADALSKRAAAYLKLNKLQEAVADASRASELDPTLHMTHMRHGVAQFELEKYAEAKRVFQRGKDTAPKADEALIKRFQTWIRKCDAELDTDDEEL---------VIPDDPVPMQTSAPSNQGAAVVAPLPMKPTIRHDWYQSNTHVTVSILQKKLAQDDVEVSIEPKKLLVRVKLDGEMAEAYNEALFDEVIPDESAFKVLGSKVELKLKKKSSGMHWDKLEEVVYQSGAQVMTGPAAV----------------------FEAKPEQVPRPYASSRDWNQIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSSYVAALRVVCSGQTSGGTVLSTNWKEVADKDYEK--ERTAPSGMEWKQWG 903

[Close]

BLAST of NO05G03140 vs. NCBI_GenBank
Match: XP_024572769.1 (sgs-domain-containing protein [Plasmopara halstedii] >CEG36400.1 sgs-domain-containing protein [Plasmopara halstedii])

HSP 1 Score: 228.8 bits (582), Expect = 2.800e-56
Identity = 143/389 (36.76%), Postives = 211/389 (54.24%), Query Frame = 0

Query:    1 MEQAQQAFIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQAMQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTEPEGRKYATWLRKVAVEMEEGEEGVKEXXXXXXXXXXXXXXPLTTLKPT-----TAAALSMPVQP--KYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQL--TIKGNDGSTVLLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLS--ASSSSTNAASVPVXXXXXXXXXXXXXXXXXXXXXXXXXSKPLRPYASHKDWGAVEREITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLSTNWGEVANKDYEKDEERKAPEGMEWRKWG 379
            + +    F+DE +  A + YT  L    ++   L+ RAAVYLKL K  +A  DA++A  L P L +A  R G+A F LE +A AK +F  GK+   +  E   +++ TW+RK   E++   E                  P++  +        AA   +P +   ++ +YQ+ TH+T+ +LQK L + +  + I+P +L   IK ++         LF+ ++P+ES     ++K+E+KLKK + G+ W  L      SST   + P                           +  RPYAS++DW  +E+ I  ELE+EKP GEEA+ KLF+DIY+ A ++TR+AM KS+QTSGGTVLSTNW EVA KDYEK  ER AP+GMEW+KWG
Sbjct:    4 LHEGNSLFVDEAYDEALQSYTRALKHQQENAEVLSKRAAVYLKLRKLHEAEGDASQATKLDPTLYMAHLRHGMAQFELEKYAEAKQSFQNGKEATPQVNEALIKRFQTWIRKCDAELDSENEA----------DLIISDDPVSVQRSAGSDCGAAAIAPLPAKSVIRHDWYQSSTHVTLAILQKNLPQDDVEITIEPTRLLVRIKLDNDIVEAYNEALFDEIVPDESSYQVLSSKLELKLKKKSIGMHWDKLEEVTYKSSTQVLTGPA------------------AVFEAKPEQVPRPYASNRDWNRIEKTIGDELEAEKPEGEEAMQKLFRDIYAKADENTRKAMNKSFQTSGGTVLSTNWKEVAEKDYEK--ERTAPDGMEWKKWG 362

The following BLAST results are available for this feature:

BLAST of NO05G03140 vs. NCBI_GenBank

BLAST of NO05G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28086.1	2.700e-107	55.64	suppressor of g2 allele of skp1 [Nannochloropsis g...	[more]
XP_008902515.1	6.500e-61	39.32	hypothetical protein PPTG_09337 [Phytophthora para...	[more]
ETL98007.1	6.500e-61	39.32	hypothetical protein L917_04843 [Phytophthora para...	[more]
ETO80304.1	8.500e-61	39.06	hypothetical protein F444_05171 [Phytophthora para...	[more]
KUF87749.1	1.900e-60	39.06	SGT1 A protein [Phytophthora nicotianae]	[more]
CBN79827.1	3.200e-60	41.58	SGT1 homologue [Ectocarpus siliculosus]	[more]
OQR95352.1	8.000e-59	38.44	hypothetical protein THRCLA_07948 [Thraustotheca c...	[more]
XP_009526808.1	1.400e-58	39.95	hypothetical protein PHYSODRAFT_498024 [Phytophtho...	[more]
KUF98456.1	2.600e-57	37.97	E3 ubiquitin-protein ligase Mdm2 [Phytophthora nic...	[more]
XP_024572769.1	2.800e-56	36.76	sgs-domain-containing protein [Plasmopara halstedi...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL085	nonsL085	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G03140.1	NO05G03140.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584636	gene_3119	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G03140.1	NO05G03140.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G03140 ID=NO05G03140|Name=NO05G03140|organism=Nannochloropsis oceanica|type=gene|length=1827bp
CTCAGTCATCCGGGTTCCGACCAGCCAGAAGCCTCCCTCCGATTTTCTAG
ACGCAATTTTTGTCTCACCACACTCCTTCCCATCCCAATATTCCACATGC
GGGACAATCCCTTATATTTCCTGTACCTGAAGCCATGGAGCAAGCGCAGC
AAGCGTTCATAGACGAGGAGTTTGCCAGGGCCGAAGAGgtgcgtgccctc
cgcactgtggaaggaatggggttgaaaaaaagaaagttggctgcattttt
cctccgcctgggacctaaatcatacgccaaaattccaccgccctgattct
gctatatgtgggtttatggctgagactgggcatggcgctttctatcctcc
tcttctccttcctcaaagccttccctcctccccttgctccctacctcccc
tctcttccctccaccgacacacacccatagCTATACACCGTCTATCTCAC
CACTCACCCCGATGACGTCATCGCCCTTGCCTCCCGCGCTGCCGTATACC
TGAAGCTGGACAAGCCGCCTCAAGCCATGCAAGACGCTGCGAAAGCTGCC
ACGCTCAAACCCGACTTGGAAGTGGCATGGTACCGCCAAGGACTCGCTGC
CTTTGCTCTCGAGGACTTTGCGCGGGCCAAAATCGCGTTCATGGAAGGCA
AGCAGTTGTTGGGCGAGGGTACTGAGCCGGAGGGGCGAAAGTACGCGACA
TGGCTCCGCAAGGTGGCGGTTGAGATGGAGGAAGGGGAGGAAGGGGTGAA
GGAGGCGTCCAGCGTCACCACCACCACTACCACAAGAGAGCCTGCGCCCC
TCACCACGCTTAAACCCACGACTGCGGCCGCCTTATCTATGCCTGTGCAA
CCCAAATATCAATACTATCAGACCCCGACCCATCTGACTGTGACGCTCCT
CCAGAAGGGGCTGAAGGAAGGGGAGGCTAGCGTGGTGATCCAGCCTCGTC
AACTCACAATCAAGGGTAATGACGGAAGTACCGTGCTGCTAAAGAGACAG
TTATTTGAGGCTGTAATTCCGGAGGAGAGTGTCATCATTTTTTTTGCAAC
CAAAGTCGAAATCAAGCTCAAGAAAGTCACCGAAGGCTTGCCCTGGCCTG
ACTTGAGTGCTTCTTCCTCCTCGACGAACGCTGCTTCCGTTCCTGTTTTG
CAGCCGCCTCTCTCGTCTTCTTCTTCTCCTTCATCGTCAGTTTCTTACAG
TAGTAGTAAGTGCAGTACTAGCAGCAAGCCGTTGCGGCCGTACGCCAGCC
ATAAGGATTGGGGCGCGGTCGAGCGGGAGATAACGAAGGAGCTGGAGAGC
GAGAAGCCGGTAGGGGAGGAAGCGTTGAACAAATTGTTCAAAGACATTTA
TTCCAATGCTAGCGACGATACACGCAGGGCAATGGTGAAGAGCTATCAGA
CGTCGGGTGGGACTGTGCTATCCACGAATTGGGGAGAGGTCGCCAACAAG
GATTATGAAAAGGACGAGGAGAGAAAGGCACCCGAGGGGATGGAGTGGCG
GAAGTGGGGATGAAGGGAGGGGTGGGATGAAGGGGCAAGAATGGGCTTTG
TCTTGTTAATTTGTGTATTTGTCTCTTTCTTGGGGGATGGGACCAATATC
AAAAAAAGATAATAGAGTCACCGGGAAATAGAAATAGTGGGAGGAAAGGC
AATACAGGAATAAGTTGATGCTGATGCTGGAGCCGGTCGTGCAGGTGAGG
CTGCACCAGCAAACTCACAGCTATCCCTCTCTTAGAGCCAAGACTCCTAG
TTTATGTGTTGTACGTGCATACAGACAAAACGACGAAAGAGGGAATCAAT
GAAGAAACGAAATAGGAGGAAAGGAGC

protein sequence of NO05G03140.1

>NO05G03140.1-protein ID=NO05G03140.1-protein|Name=NO05G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=379bp
MEQAQQAFIDEEFARAEELYTVYLTTHPDDVIALASRAAVYLKLDKPPQA
MQDAAKAATLKPDLEVAWYRQGLAAFALEDFARAKIAFMEGKQLLGEGTE
PEGRKYATWLRKVAVEMEEGEEGVKEASSVTTTTTTREPAPLTTLKPTTA
AALSMPVQPKYQYYQTPTHLTVTLLQKGLKEGEASVVIQPRQLTIKGNDG
STVLLKRQLFEAVIPEESVIIFFATKVEIKLKKVTEGLPWPDLSASSSST
NAASVPVLQPPLSSSSSPSSSVSYSSSKCSTSSKPLRPYASHKDWGAVER
EITKELESEKPVGEEALNKLFKDIYSNASDDTRRAMVKSYQTSGGTVLST
NWGEVANKDYEKDEERKAPEGMEWRKWG*

Synonyms

Publications