NO05G02990, NO05G02990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02990 vs. NCBI_GenBank
Match: EWM28123.1 (uba thif-type nad fad binding fold domain deoxiribonuclease [Nannochloropsis gaditana]) HSP 1 Score: 312.0 bits (798), Expect = 2.000e-81 Identity = 169/304 (55.59%), Postives = 207/304 (68.09%), Query Frame = 0 Query: 1 MLLVDSHCHIHKGKSGTGALTGGRGEKDSWKTQPTLFEGDTTCVVASNAEKLDCGDVILYCSMAVEEGDWAMLIS------------MEEQGQQHKAVAAGGLGIHPWKAHEAKPGWESRLREALIRRPSLLVGEIGLDKSREADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAERFLRRAL 293 M+LVD+HCHIH+ +G A + ++ + PT S A++ LYC MAVEE DW+ L++ +++ Q K V A GLGIHPWK K GWE RL+EAL R P+L+VGEIGLDK+ E+ K WE Q K+FE QM+LAAELRRPVS+HCVRAYG VY+WLK R A E PPS+AFHSYTGS +MA AFL L HL+GSVFFGFS +VCLR PA E +L VL +LP+ESLLLESDLDDR AV AM +C+VVA G++R LAE+TT+NAERFLRRAL Sbjct: 1 MILVDTHCHIHRWGNGEVAASPAYTKRGNNVRNPTRMASGGNDFDNSTADQYIHP---LYCLMAVEEADWSGLLAISGRDRKEKKPLLQDVSQDTKEVVAVGLGIHPWKTQSVKSGWEGRLKEALERDPTLIVGEIGLDKAGESGKKSWEEQRKIFELQMKLAAELRRPVSVHCVRAYGIVYEWLKGR-SAAELPPSVAFHSYTGSLDMAGAFLRLEHLQGSVFFGFSAAVCLRYPAAEAKLRQVLPILPKESLLLESDLDDREAVPGAMNTICDVVAEVKGMERNVLAEVTTKNAERFLRRAL 300
BLAST of NO05G02990 vs. NCBI_GenBank
Match: XP_005854256.1 (hypothetical protein NGA_2033200, partial [Nannochloropsis gaditana CCMP526] >EKU22104.1 hypothetical protein NGA_2033200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.9 bits (533), Expect = 1.100e-50 Identity = 108/159 (67.92%), Postives = 126/159 (79.25%), Query Frame = 0 Query: 120 LVGEIGLDKSREADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAE 279 +VGEIGLDK+RE+ K WE Q K+FE QM+LAAELRRPVS+HCVRAYG VY+WLK R A E PPS+AFHSYTGS +MA AFL L HL+GSVFFGFS +VCLR PA E +L VL +LP+ESLLLESDLDDR AV AM +C+VVA G++R LAE Sbjct: 1 IVGEIGLDKARESGKKSWEEQRKIFELQMKLAAELRRPVSVHCVRAYGIVYEWLKGR-SAAELPPSVAFHSYTGSLDMAGAFLRLEHLQGSVFFGFSAAVCLRYPAAEAKLRQVLPILPKESLLLESDLDDREAVPGAMNTICDVVAEVKGMERNVLAE 158
BLAST of NO05G02990 vs. NCBI_GenBank
Match: XP_004352517.1 (Cut9 interacting protein Scn1, putative [Acanthamoeba castellanii str. Neff] >ELR23040.1 Cut9 interacting protein Scn1, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 137.1 bits (344), Expect = 8.700e-29 Identity = 88/254 (34.65%), Postives = 131/254 (51.57%), Query Frame = 0 Query: 40 DTTCVVASNAEKLDCGDVILYCSMAVEEGDWAMLISMEEQGQQHKAVAAGGLGIHPWKAHEAKPGWESRLREALIRRPSLLVGEIGLDKSREADKTG---WEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLK---KRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVF-FGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAER 287 D TC N + + V C + V + DW + +EE ++ +HPW AH W L L R P+ +VGEIGLD++ TG + QL++FE+Q LA L+RPVSIHCVRA+G ++ ++ K PPS+ HSY G+ M + + GS F F FS + +RSP T V+ +P++ LL+E+D + ++ +M MCE+VA+A G + A IT NA+R Sbjct: 32 DDTC----NVDLIPQLPVAGLCLIGVRDIDWPV---VEELHSRYGDKVRAAFAVHPWYAHRRGSDWLEELEALLRRNPAAIVGEIGLDRAATTPDTGRCEHQHQLEVFEKQFRLAGRLQRPVSIHCVRAFGQFFEAVQQILKEDGKMALPPSIIMHSYGGTAGMMDSLTTMKQGIGSRFYFSFSPVINMRSPKT----VEVIKHIPQDRLLIETDQNTPTSIEDDIMEMCEIVAKARGWSVEQAARITLENAQR 274
BLAST of NO05G02990 vs. NCBI_GenBank
Match: XP_005842230.1 (hypothetical protein GUITHDRAFT_99033 [Guillardia theta CCMP2712] >EKX55250.1 hypothetical protein GUITHDRAFT_99033 [Guillardia theta CCMP2712]) HSP 1 Score: 134.0 bits (336), Expect = 7.400e-28 Identity = 87/254 (34.25%), Postives = 125/254 (49.21%), Query Frame = 0 Query: 56 DVILYCSMAVEEGDWAMLISMEEQGQQHKAVAAGGLGIHPWK------------------AHE-AKPGWESRLREALIRRPSLLVGEIGLDKS---READKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAERF 288 D + M DW+ + + QH + G HPW AHE + W+ LR L + PS VGEIGLD D +E Q ++F+ Q+E+A E+ RPVS+HCV+AYG ++D L+ + E PP++ HS+ G M +F+ + +FGFS LRSP T V++ +P + LLLESDL+D V A++RM +V+A A G A+ T NAE F Sbjct: 317 DQVCLSLMGTRVSDWSAIADL---AAQHASKLVPSFGFHPWYALVCCRVHRDGTERATRWAHERVEEDWKQELRRLLHQHPSACVGEIGLDGQWIPPGLDSVQYEKQKEVFQAQLEIATEMSRPVSLHCVKAYGDMFDMLR---FSDELPPAIYMHSFGGKVGMLNSFVKMKKYGDRFYFGFSSFTNLRSPKTS----QVIASVPDDKLLLESDLEDAKEVHGALLRMLQVIADAKGWTLDYAAKKTWENAETF 560
BLAST of NO05G02990 vs. NCBI_GenBank
Match: PNW70378.1 (hypothetical protein CHLRE_17g717200v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 131.3 bits (329), Expect = 4.800e-27 Identity = 90/279 (32.26%), Postives = 124/279 (44.44%), Query Frame = 0 Query: 63 MAVEEGDWAMLISMEEQGQQHKAVAAGGLGIHPWKAHE--------------------------------------------AKPGWESRLREALIRRPSLLVGEIGLDKSREAD----KTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGS-VFFGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAERFLRRAL 293 M GDWA + ++ Q HK + G+HPW AH A W RLRE L+R P LVGE GLD++ + GW+ QL + E + LAAELRRPVS+HCV+ YG + D L +R CPP + HSY GS ++ F LP G ++F FS + R P +L L+ +P E LLLESD + + ++ + E VA A GV ++ AE + F + L Sbjct: 47 MGTRLGDWADVEAL-AQAAPHKVIPC--FGVHPWFAHRHALHPDQATQPAALLDAPANGRDSPDRHPALLAALGPGGDLAVAAPEQWRPRLRELLLRHPHALVGEFGLDRAAVVPGSRLQPGWDHQLALTEAHLALAAELRRPVSMHCVQGYGHLQDML-RRLGPEGCPPKIMLHSYGGSVDLVKGFTRLPGGLGERIYFSFSDVINGRKPGQRAKLLQRLAAVPAERLLLESDQNSPAGIDSGLVYILEAVAEARGVSVETAAEAAAATFQDFFQSCL 321
BLAST of NO05G02990 vs. NCBI_GenBank
Match: XP_005786603.1 (hypothetical protein EMIHUDRAFT_420943 [Emiliania huxleyi CCMP1516] >EOD34174.1 hypothetical protein EMIHUDRAFT_420943 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 130.6 bits (327), Expect = 8.100e-27 Identity = 94/298 (31.54%), Postives = 143/298 (47.99%), Query Frame = 0 Query: 1 MLLVDSHCHIHKGKSGTGALTGGRGEKDSWKTQPTLFEGDTTCVVASNAEKLDCGDVILYCSMAVEEGDWAMLISMEEQGQQHKAVAAGGLGIHPWKAHEAKPGWESRLREALIRRPSLLVGEIGLDKSRE------ADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLR---SPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAERFLR 290 +LLVD+H H+H+ +G GA+ + D + +L AV E W +++ +G + + GLG+HPW+AHE GWE+RLR L + P LVGEIGL K A W QL++F Q+ LAAEL+RP S+HCV+A+ ++ L + PP++ HS++GS L+ ++FGFS +V + + + L + + +P LL+ESD D + +A+ +VA A G + A TT N RFLR Sbjct: 29 LLLVDTHNHLHQ-SAGGGAV-----------------------------RRCDSYEAVL----AVAEACWDSVLARCAEGPR----SLPGLGVHPWQAHEVAEGWEARLRALLQQHPRALVGEIGLCKCARSLRGPGAKARVWPQQLRVFRTQLALAAELQRPTSVHCVKAHSSLVAALDDLDV---LPPAVGLHSFSGSAHQIGQLLS-TRAGPRLYFGFSHTVNVAMGGAAEPQPALLDAIRAVPERKLLVESDCADERSATLALPLALRLVADARGWTLERAARTTTENGLRFLR 284
BLAST of NO05G02990 vs. NCBI_GenBank
Match: ORX97329.1 (Metallo-dependent hydrolase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 130.6 bits (327), Expect = 8.100e-27 Identity = 78/204 (38.24%), Postives = 115/204 (56.37%), Query Frame = 0 Query: 90 GLGIHPWKAHEAKPG--WESRLREALIRRPSLLVGEIGLDKSREADKTG----WEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAERF 288 G G+HPW A K WE +L++ L + + ++GEIGLDK KTG QL++F+ Q LAA L R VS+HCV+++G + D ++ E PP + HSY+GS E+A AFL LP G+ F+ FS S + S +L + L V+PR +LLESD + V M +C ++ G + +AEIT +N++ F Sbjct: 38 GFGVHPWYAEGMKESDLWEEKLKQYLEKHENAVLGEIGLDKIATDPKTGERYHLPTQLEIFQRQFALAASLNRVVSVHCVQSHGHLLDCFRQL-KPEEFPPKIMLHSYSGSHEIAKAFLKLPKKVGARFY-FSFSKLVNSKT--KKLVDSLQVIPRNRVLLESDAHESLKVDGVMEEICNIIGDIWGCEGAEVAEITYKNSKEF 237
BLAST of NO05G02990 vs. NCBI_GenBank
Match: KOO28205.1 (hypothetical protein Ctob_000829 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 126.3 bits (316), Expect = 1.500e-25 Identity = 87/240 (36.25%), Postives = 118/240 (49.17%), Query Frame = 0 Query: 61 CSMAVEEGDW-AMLISMEEQGQQHKAVAAG--------GLGIHPWKAHEAKPGWESRLREALIRRPSLLVGEIGLDKSREADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLK-KRPMATECPPSLAFHSYTGSPEMAAAFLALPHLKG---SVFFGFSL-SVCLRSPATETRLYNVLSVLPRESLLLESDLDDRCAVRVAMMRMCEVVARATGVQRQSLAEITTRNAER 287 C M+V E +W AML + + AA +G+HPW GW RLR +L+R P +VGE GLD++R + W+ QL F Q+ LAAELRR + +HCVRA G + D L+ + A+ PP L H++ GS E AA L +FFGFS +V LR A V++ +P ++LLLESD A+ C VA A G A T NA + Sbjct: 430 CLMSVGEAEWPAMLQAAADAAALQPTAAAAEVTGTTRVAMGVHPWYVDAQTDGWPERLRASLLREPGAVVGEAGLDRARL--DSSWDAQLVAFRTQLRLAAELRRALVVHCVRADGALLDLLRAEAAAASSLPPVLVMHAFGGSVETAATLARLSASASRTCRIFFGFSARAVRLRRAAA------VIASVPADALLLESDEHTADGAAAALAEACARVAHARGWSEADAAARTAANARQ 661
BLAST of NO05G02990 vs. NCBI_GenBank
Match: POM62301.1 (TatD family domain containing hypothetical protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 123.6 bits (309), Expect = 9.900e-25 Identity = 94/258 (36.43%), Postives = 126/258 (48.84%), Query Frame = 0 Query: 3 LVDSHCHIHKGKS-GTGALTGGRGEKDSWKTQPTLFEGDTTCVVASNAEKLDCGDVILYCSMAVEEGDWAMLISMEEQGQQHKA--VAAGGLGIHPWKAHEAKPGWES--RLREALIRRPSLLVGEIGLDKSREADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATE-CPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSV---LPRESLLLESDLDDR 252 LVD+HCH+H + G+L+ R FEG V S A V+ S A E DW +L EQ QH+ G G+HPW AHE ES LR+ L R P+ +VGEIGL KS ++Q+ F Q+ELAAE+ R +HCV YG + + L+ E PP L HSY+G P+M +FLAL K VFF + T+ R+ ++ LP E+LLLE+D D+ Sbjct: 5 LVDAHCHLHDERLWSNGSLSSRR-----------TFEG-----VLSRAHNAHVTHVV---SCATHEQDWRVL----EQLMQHETPLKIVPGFGVHPWWAHELSMPSESLKSLRDTLTRYPTAIVGEIGLCKSARGKLVPVDVQVAAFRAQLELAAEMERACVLHCVGYYGKLLEILRDVGRKDERLPPVLVLHSYSGPPDMVQSFLALRGTK--VFFSLN-----SKQLTDPRMKKAVACCKELPLEALLLETDAPDQ 232
BLAST of NO05G02990 vs. NCBI_GenBank
Match: POM78527.1 (TatD related DNase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 123.2 bits (308), Expect = 1.300e-24 Identity = 94/256 (36.72%), Postives = 128/256 (50.00%), Query Frame = 0 Query: 3 LVDSHCHIHKGKS-GTGALTGGRGEKDSWKTQPTLFEGDTTCVVASNAEKLDCGDVILYCSMAVEEGDWAMLISMEEQGQQHKAVAAGGLGIHPWKAHEAKPGWES--RLREALIRRPSLLVGEIGLDKSREADKTGWEIQLKMFEEQMELAAELRRPVSIHCVRAYGTVYDWLKKRPMATE-CPPSLAFHSYTGSPEMAAAFLALPHLKGSVFFGFSLSVCLRSPATETRLYNVLSV---LPRESLLLESDLDDR 252 LVD+HCH+H + G+L+ R FEG V S A V+ S A E DW +L + Q K V G G+HPW AHE ES LR+ L R P+ +VGEIGL KS ++Q+ F Q+ELAAE+ R +HCV YG + + L+ E PP L HSY+G P+M +FLA L+G+ F FSL+ T+ R+ ++ LP E+LLLE+D D+ Sbjct: 5 LVDAHCHLHDERLWSNGSLSSRR-----------TFEG-----VLSRAHNAHVTHVV---SCATHEQDWLVLEQLMRHETQLKIVP--GFGVHPWWAHELSMPSESLKSLRDTLTRYPTAIVGEIGLCKSARGKLVPVDVQVAAFRAQLELAAEMERACVLHCVGYYGKLLEILRDVGRKGERLPPVLVLHSYSGPPDMVQSFLA---LRGTNVF-FSLN---SKQLTDPRMKKAVACCKELPLEALLLETDAPDQ 232 The following BLAST results are available for this feature:
BLAST of NO05G02990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02990 ID=NO05G02990|Name=NO05G02990|organism=Nannochloropsis oceanica|type=gene|length=882bpback to top protein sequence of NO05G02990.1 >NO05G02990.1-protein ID=NO05G02990.1-protein|Name=NO05G02990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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