NO05G02980, NO05G02980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02980 vs. NCBI_GenBank
Match: XP_005852671.1 (sam-dependent methyltransferase [Nannochloropsis gaditana CCMP526] >EKU23161.1 sam-dependent methyltransferase [Nannochloropsis gaditana CCMP526] >EWM24800.1 sam-dependent methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 324.3 bits (830), Expect = 3.700e-85 Identity = 180/323 (55.73%), Postives = 214/323 (66.25%), Query Frame = 0 Query: 3 AHHNVTSSSLHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPP----AGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQ--EEGVIDASG-----------------------------VEPNSSSSSSGSTKICS----SPLPR-MHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 +H NVT SSL LFE AW+AYRKLVD DYMEH+ALT IA +LPTLLP G WMADLGCGDLGLLAP+LRPLPLAGFIGVDATAEVLPLAA RL R E ++ PWPCEWVCADLL+WSE+RR ++ GV DA G E + + + CS SP+PR ++V+S LFALHHLSD KQRAL ALRAC+A GGS+L+AD+FR+DGE RE YL RY+AR+ EW L +EER + EHV +SD+PSERS F +A+ AGW + RWLW H AEA++LLQ Sbjct: 2 SHQNVTPSSLQLFEHAWQAYRKLVDNDYMEHSALTTAIALILPTLLPSPCPVTGKKGAWMADLGCGDLGLLAPMLRPLPLAGFIGVDATAEVLPLAARRL-NARAESLQ---ARPPWPCEWVCADLLEWSEKRRDVMRGISGGVGDAPGRVSFLLTKEEDGRTGHRHVEGKAEGRETVAEEDGCAVRKDAGGECSGLPLSPVPRYLNVVSSLFALHHLSDSGKQRALTALRACVAPGGSMLVADIFRQDGEGRELYLERYEARSREWTALTEEERGLITEHVRSSDFPSERSAFERMAKEAGWAQVRWLWEASHAAEALVLLQ 320
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_094590205.1 (class I SAM-dependent methyltransferase [Vulcanococcus limneticus]) HSP 1 Score: 251.9 bits (642), Expect = 2.400e-63 Identity = 140/275 (50.91%), Postives = 172/275 (62.55%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPPAGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTV-EWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 + LF +W+AYR +VD D MEH ALT + A+L L G+ GWMADLGCGDLGLLAP+LR LPLAG IGVDATA VLPLAA R+ G+P+PC+W+ +DLLDWSE RR Q E G EP + ++SCLFALHHL D KQR L ALR C+A G LL+ADVFR DGEDR+AY+ RY R +W L ER+ V +H+ SD+P+ER +F LA AGW ++ WLW G H AEA+LLL+ Sbjct: 1 MELFTRSWQAYRHVVDLDLMEHRALTRALEALL--LERGGGAPLGWMADLGCGDLGLLAPILRRLPLAGLIGVDATAAVLPLAAARM------------EGSPFPCQWIDSDLLDWSEARR--AQRESDPPGPGPEP-------------------LSLVSCLFALHHLDDSNKQRVLEALRPCLAPDGCLLVADVFRGDGEDRQAYIQRYLQRIASQWQELPAAERQLVGDHLSASDFPAEREQFRQLAAAAGW-QSHWLWNGRHGAEALLLLE 239
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_094512567.1 (class I SAM-dependent methyltransferase [Synechococcus sp. MW101C3]) HSP 1 Score: 178.7 bits (452), Expect = 2.500e-41 Identity = 112/276 (40.58%), Postives = 151/276 (54.71%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLP--PAGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVE-WVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLL 285 + LFE W YR++VD D MEH AL+A A + L P+GS M DLGCGDL LLAPLLR LPL ++G+D A VLPLAA +L G P+PC W DLL W+ ++ +G +P +S+ ++P+ +H FA+HHL+ P K R LAA RA +A G LL ADVFR+ GE REAY++RY R + W L EER+ V++H+ D+P++ + A GW + G H AEA+ LL Sbjct: 1 MDLFERQWSTYRRVVDHDLMEHKALSAATTAAIEGWLAQRPSGSPLPRMVDLGCGDLALLAPLLRRLPLGSYLGIDLAAPVLPLAAAQL------------QGVPYPCAWREQDLLSWA------------LEPAGDDPGASA---------AAPVDLIHT---SFAVHHLTTPEKARFLAACRARLAPTGLLLWADVFREPGESREAYVARYVQRISDGWQALAAEERQRVMDHLSRFDHPADATAIQHTAEACGW-RXXXXXRGSHRAEALALL 239
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_038551756.1 (class I SAM-dependent methyltransferase [Synechococcus sp. KORDI-52]) HSP 1 Score: 166.0 bits (419), Expect = 1.700e-37 Identity = 101/274 (36.86%), Postives = 135/274 (49.27%), Query Frame = 0 Query: 14 LFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPPAGS--STGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 LFE W+ +RK+++ D MEH A+ A L G ++ + DLGCGDL LAPL R LPL + G+D A VLPLA ER G A +PC W C DLLDW+ Q E +D +I FA+HHLSD K R L R +A G L+ DVF+++ E R+ YL RY AR +W L E+R+AV++H+ D+P+ R ++A GW W W G H AEA+ LL+ Sbjct: 3 LFEQQWQTFRKVLNHDVMEHRAVADATAVALRDWCDQRGDWRTSVALVDLGCGDLAHLAPLFRSLPLRSYTGIDLAASVLPLA------------ERQMGAARFPCHWRCGDLLDWA-----VAQSEQPVD---------------------------LIHSAFAIHHLSDSDKGRFLEGARRRVADDGLLVWTDVFQEEDESRDDYLKRYVARVQQWPGLSGEQRDAVIDHLKRCDWPARRGWIESVAADCGW-TMTWAWRGQHRAEALALLR 231
BLAST of NO05G02980 vs. NCBI_GenBank
Match: AII47926.1 (hypothetical protein KR52_01965 [Synechococcus sp. KORDI-52]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 100/274 (36.50%), Postives = 135/274 (49.27%), Query Frame = 0 Query: 14 LFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPPAGS--STGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 +FE W+ +RK+++ D MEH A+ A L G ++ + DLGCGDL LAPL R LPL + G+D A VLPLA ER G A +PC W C DLLDW+ Q E +D +I FA+HHLSD K R L R +A G L+ DVF+++ E R+ YL RY AR +W L E+R+AV++H+ D+P+ R ++A GW W W G H AEA+ LL+ Sbjct: 1 MFEQQWQTFRKVLNHDVMEHRAVADATAVALRDWCDQRGDWRTSVALVDLGCGDLAHLAPLFRSLPLRSYTGIDLAASVLPLA------------ERQMGAARFPCHWRCGDLLDWA-----VAQSEQPVD---------------------------LIHSAFAIHHLSDSDKGRFLEGARRRVADDGLLVWTDVFQEEDESRDDYLKRYVARVQQWPGLSGEQRDAVIDHLKRCDWPARRGWIESVAADCGW-TMTWAWRGQHRAEALALLR 229
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_094556359.1 (class I SAM-dependent methyltransferase [Synechococcus sp. 1G10]) HSP 1 Score: 163.3 bits (412), Expect = 1.100e-36 Identity = 102/276 (36.96%), Postives = 137/276 (49.64%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLP--PAGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVE-WVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLL 285 + F+ W YR++VD D MEH AL+ A + L PAG+ M DLGCGDLGLLAP+LR LPL ++G+D +A VLP AA L G +PC+W DLL W+E + ++ FALHHL+D K + L R +A GG LL ADVFR+ GE R AY++RY R W LE E+++ V++H+ D P++R A GW + WLW G H AEA+ +L Sbjct: 1 MDFFDRQWSTYRRVVDHDLMEHQALSTATTAAIEGWLAARPAGAPGARMVDLGCGDLGLLAPVLRHLPLGSYLGLDLSAPVLPRAAAAL------------GPVSYPCQWREQDLLAWAE-------------------------------XXXXXXXVDLLHSAFALHHLNDENKSKFLELCRRHLAPGGLLLWADVFREPGEARAAYVARYVDRIRSGWNPLEPEQQQQVIDHLSQFDDPADREAIQRSAEDCGW-RWHWLWQGAHHAEALAML 232
BLAST of NO05G02980 vs. NCBI_GenBank
Match: AKN61245.1 (SAM-dependent methyltransferase [Synechococcus sp. WH 8020]) HSP 1 Score: 161.8 bits (408), Expect = 3.200e-36 Identity = 103/276 (37.32%), Postives = 130/276 (47.10%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPPAGSSTG--WMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 + LFE W YR LV+ + MEH ++ A + L T M DLGCGDLG LAPLLR LPL ++G+D T VLPLA +R G P+PC W DLL+W+ CSS R+ +I FALHHLS K L R + T G + ADVFR + E R YL RY R +W L + +R ++ +H+ T D+P+ R AR GW RW W G H AEAV LLQ Sbjct: 1 MDLFERQWATYRILVEHNLMEHCEISEATTAGIHQWLAQREDQTQAVAMVDLGCGDLGQLAPLLRTLPLKKYVGLDLTPAVLPLA------------QRNLGSVPYPCVWEHGDLLNWA--------------------------------CSSQHNRVDLIHSSFALHHLSQDQKLMFLEGARKKIETNGLFIWADVFRPNQESRLDYLRRYCKRISQWPGLSQTQRNSISQHIQTHDFPANRDWLEQQARAHGW-SMRWGWIGQHNAEAVALLQ 231
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_084764089.1 (class I SAM-dependent methyltransferase [Synechococcus sp. WH 8020]) HSP 1 Score: 161.8 bits (408), Expect = 3.200e-36 Identity = 103/274 (37.59%), Postives = 129/274 (47.08%), Query Frame = 0 Query: 14 LFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLPPAGSSTG--WMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLLQ 286 LFE W YR LV+ + MEH ++ A + L T M DLGCGDLG LAPLLR LPL ++G+D T VLPLA +R G P+PC W DLL+W+ CSS R+ +I FALHHLS K L R + T G + ADVFR + E R YL RY R +W L + +R ++ +H+ T D+P+ R AR GW RW W G H AEAV LLQ Sbjct: 11 LFERQWATYRILVEHNLMEHCEISEATTAGIHQWLAQREDQTQAVAMVDLGCGDLGQLAPLLRTLPLKKYVGLDLTPAVLPLA------------QRNLGSVPYPCVWEHGDLLNWA--------------------------------CSSQHNRVDLIHSSFALHHLSQDQKLMFLEGARKKIETNGLFIWADVFRPNQESRLDYLRRYCKRISQWPGLSQTQRNSISQHIQTHDFPANRDWLEQQARAHGW-SMRWGWIGQHNAEAVALLQ 239
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_094586792.1 (class I SAM-dependent methyltransferase [Synechococcus sp. BO 8801]) HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35 Identity = 103/276 (37.32%), Postives = 136/276 (49.28%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLLP--PAGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKAR-TVEWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLL 285 + F+ W YR +VD D M+H ALTA + L L PAGS+ M DLGCGDL ++APLLR LPL ++GVD + VLP AA L G +PC+W DLL W+E G EP + ++ FA+HHLSD K R L R +A G L ADVFR GE+R AY++RY R W L E+++ V++H+ D+P +R A GW +WLW G H AEA+ +L Sbjct: 1 MDFFDRQWATYRAVVDHDLMQHRALTAALGQALEGWLAARPAGSAPPRMVDLGCGDLAVMAPLLRGLPLGSYLGVDLSGPVLPRAAAAL------------GPVLYPCQWREQDLLAWAETE------------PGPEP-------------------VDLLHSAFAIHHLSDDDKARFLRLCRRHLAPNGLFLWADVFRPLGENRPAYVARYVDRIRSSWDVLAPEQQQPVIDHLSQFDFPPDRDAIRRTAEACGW-TWQWLWQGDHRAEALAVL 232
BLAST of NO05G02980 vs. NCBI_GenBank
Match: WP_010304564.1 (class I SAM-dependent methyltransferase [Synechococcus sp. CB0101]) HSP 1 Score: 157.1 bits (396), Expect = 7.900e-35 Identity = 99/276 (35.87%), Postives = 138/276 (50.00%), Query Frame = 0 Query: 12 LHLFETAWRAYRKLVDEDYMEHAALTAVIAAVLPTLL--PPAGSSTGWMADLGCGDLGLLAPLLRPLPLAGFIGVDATAEVLPLAAGRLGGGRGEGVERGYGGAPWPCEWVCADLLDWSEERRKALQEEGVIDASGVEPNSSSSSSGSTKICSSPLPRMHVISCLFALHHLSDPLKQRALAALRACMATGGSLLIADVFRKDGEDREAYLSRYKARTV-EWVRLEKEEREAVLEHVCTSDYPSERSEFVALARRAGWGKARWLWGGMHEAEAVLLL 285 + LF W +YR +V+ + MEH A+ A A+ L L PA + M DLGCGDL LLAP+L+ LPL + G+D TAEVLPLA ++ G +PC W+ DLL W+ R A ++E +D + FA+HHLSD KQ L LR +A GG + DVFR+ GE R+AY+ RY R W +L +++E V H+ + D P++R +A AGW + G H AEA+ +L Sbjct: 1 MDLFAQQWASYRAVVEHNLMEHQAVAATTASTLENWLVARPADAQPPRMVDLGCGDLALLAPVLKRLPLGSYTGLDLTAEVLPLA------------QQALGTVAYPCRWLEGDLLRWA--RDAADEQEEPVD---------------------------IFHSAFAIHHLSDQEKQTLLQCLRTRIAPGGLFIWVDVFREAGEARDAYVKRYLQRIASSWPQLSAQQQEHVSSHLASYDNPADRGTIETIASAAGW-QXXXXXNGAHRAEAMAVL 234 The following BLAST results are available for this feature:
BLAST of NO05G02980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02980 ID=NO05G02980|Name=NO05G02980|organism=Nannochloropsis oceanica|type=gene|length=861bpback to top protein sequence of NO05G02980.1 >NO05G02980.1-protein ID=NO05G02980.1-protein|Name=NO05G02980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bpback to top Synonyms
Publications
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