NO05G02940, NO05G02940 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02940 vs. NCBI_GenBank
Match: EWM28115.1 (30s ribosomal protein s9 [Nannochloropsis gaditana]) HSP 1 Score: 244.2 bits (622), Expect = 3.600e-61 Identity = 137/208 (65.87%), Postives = 154/208 (74.04%), Query Frame = 0
Query: 4 MLTWASSRIQQLVRVPAAVSVVQTSTTTCTNIPTVAQRFSTAAVEPSTAPEDSAALPLPDADATVDGSSLPPSLNPRLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
ML S + +L + + ++ T T T A+RFST+ P A D + + DA A+ PP LNPRLD+LNRAYATGRRKTSVARVWL AG G I VNGKEV+EYFGR AYRDKL+EPFVVT + G FDV CTVKGGGTTGQVGA++LGISRALEVWD AHRPPLAKESLFTRDSRAVE KK GQPKARKKDQWVKR
Sbjct: 12 MLPTVHSNVSKLSSISRSTALRVLVTNTGTATMACARRFSTST--PLAAEGDDPSAAVNDAHAS------PPPLNPRLDSLNRAYATGRRKTSVARVWLLAGDGRIVVNGKEVHEYFGRTAYRDKLIEPFVVTESVGQFDVKCTVKGGGTTGQVGAISLGISRALEVWDPAHRPPLAKESLFTRDSRAVESKKSGQPKARKKDQWVKR 211
BLAST of NO05G02940 vs. NCBI_GenBank
Match: PCI98432.1 (30S ribosomal protein S9 [Alphaproteobacteria bacterium]) HSP 1 Score: 156.0 bits (393), Expect = 1.300e-34 Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 0
Query: 62 PDADATVDGS-SLPPSLNPRLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
P AD T D + P P++D L R+YATGRRK +VARVW+KAG G + VNG++ +YF R +R L +PF+VT G FDV+CTVKGGG +G GAV GISRALE ++ RPPL K + TRD R VERKK G+ KAR+ QW KR
Sbjct: 27 PAADKTEDAEVTAPVKKEPKIDKLGRSYATGRRKDAVARVWIKAGSGKVTVNGRDQADYFTRTTHRLILNQPFLVTDRVGQFDVICTVKGGGLSGHAGAVRHGISRALENFEPTLRPPLKKAGMMTRDDRIVERKKVGKHKARRTKQWAKR 177
BLAST of NO05G02940 vs. NCBI_GenBank
Match: PCJ99807.1 (30S ribosomal protein S9 [Zetaproteobacteria bacterium]) HSP 1 Score: 153.3 bits (386), Expect = 8.500e-34 Identity = 83/150 (55.33%), Postives = 100/150 (66.67%), Query Frame = 0
Query: 62 PDADATVDGSSLPPSLNPRLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
P A + S P P++D L RAYATGRRK +VARVW+KAG G + VNGK+ EYF R +R L +PF+VT G FDVMCTVKGGG +G GAV GISRALE ++ RPPL K + TRD R VERKK G+ KAR+ Q+ KR
Sbjct: 27 PVAAKAEEVESAPVKKEPKIDNLGRAYATGRRKDAVARVWIKAGSGKVTVNGKDQTEYFTRTTHRLILNQPFLVTDRVGKFDVMCTVKGGGLSGHAGAVRHGISRALENFEPTLRPPLKKAGMMTRDDRIVERKKVGKHKARRTKQFSKR 176
BLAST of NO05G02940 vs. NCBI_GenBank
Match: KZV41030.1 (hypothetical protein F511_14006 [Dorcoceras hygrometricum]) HSP 1 Score: 152.1 bits (383), Expect = 1.900e-33 Identity = 77/132 (58.33%), Postives = 93/132 (70.45%), Query Frame = 0
Query: 80 RLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
++DA RAY TG+RK S+ARVW+ G+G VN KE YF + +R L+ PF T T G +DV CTVKGGGT+GQVGA+ LGISRAL+ W+ RPPL + TRDSR VERKKPG+ KARK QWVKR
Sbjct: 320 QVDAKGRAYGTGKRKCSIARVWISPGEGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGMWDVSCTVKGGGTSGQVGAIRLGISRALQNWEPGFRPPLKEAGFLTRDSRVVERKKPGKAKARKSFQWVKR 451
BLAST of NO05G02940 vs. NCBI_GenBank
Match: OWY98245.1 (Mitochondrial/chloroplast ribosomal protein S9 [Phytophthora megakarya]) HSP 1 Score: 151.4 bits (381), Expect = 3.200e-33 Identity = 80/135 (59.26%), Postives = 96/135 (71.11%), Query Frame = 0
Query: 81 LDALNRAYATGRRKTSVARVWLKAG----QGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
LD+ RAY TGRRKTSVARVW+K G ++VN K++ +YF R +R+++++PF V G FDV CTVKGGG TGQ GAV GI+RAL+ +D RP L KE L TRD R VERKKPGQ KARKK QWVKR
Sbjct: 186 LDSKGRAYGTGRRKTSVARVWVKPAAQPFTGRVQVNKKDLVDYFVRDTHREEVLKPFSVVEQIGGFDVYCTVKGGGMTGQAGAVRHGIARALQAFDPELRPALKKEGLLTRDPRMVERKKPGQAKARKKFQWVKR 320
BLAST of NO05G02940 vs. NCBI_GenBank
Match: CCI42359.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 151.0 bits (380), Expect = 4.200e-33 Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = 0
Query: 80 RLDALNRAYATGRRKTSVARVWLKAG----QGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
++D L RAY TGRRKTS ARVW+K +G +RVN K+V +YF R + R+ ++ PFV G FDVMC V+GGG +GQ GA+ GISRAL+ +D ++RP L +E TRD R VERKKPGQPKARKK QWVKR
Sbjct: 100 QVDDLGRAYGTGRRKTSTARVWIKKSSTPFRGVVRVNKKDVVDYFVRDSNREHVLSPFVAVDQVGHFDVMCNVRGGGLSGQAGAIRHGISRALQNFDPSYRPLLKEEGYLTRDPRMVERKKPGQPKARKKYQWVKR 235
BLAST of NO05G02940 vs. NCBI_GenBank
Match: CCA17820.1 (30S ribosomal protein S9 putative [Albugo laibachii Nc14]) HSP 1 Score: 150.6 bits (379), Expect = 5.500e-33 Identity = 81/152 (53.29%), Postives = 103/152 (67.76%), Query Frame = 0
Query: 65 DATVDGSSLPPSLNPR-LDALNRAYATGRRKTSVARVWLKAG----QGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
D S+ P + R +D RAY TGRRKTS ARVW+K +G +RVN K++ +YF R + R++++ PFVV G FDVMC V+GGG +GQ GA+ GISRAL+ +D ++RP L +E TRD R VERKKPGQPKARKK QWVKR
Sbjct: 150 DCEKSASAEPKIIRTRQVDESGRAYGTGRRKTSTARVWIKKSSTPFRGVVRVNKKDIVDYFVRDSNREEVLSPFVVVDQVGHFDVMCNVRGGGLSGQAGAIRHGISRALQNFDPSYRPLLKQEGYLTRDPRMVERKKPGQPKARKKYQWVKR 301
BLAST of NO05G02940 vs. NCBI_GenBank
Match: WP_092860563.1 (30S ribosomal protein S9 [Albimonas pacifica] >SFI39817.1 SSU ribosomal protein S9P [Albimonas pacifica]) HSP 1 Score: 150.6 bits (379), Expect = 5.500e-33 Identity = 84/152 (55.26%), Postives = 102/152 (67.11%), Query Frame = 0
Query: 64 ADATVDG--SSLPPSL--NPRLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
AD TVDG +S+ P+ P DALNR+YATG+RK +V+RVW+K G G I VNGKE YF R + + +PF V G G FDVMCTVKGGG +GQ GAV GIS+AL +WD + RP L TRDSR VERKK G+ KAR+ Q+ KR
Sbjct: 12 ADLTVDGDATSIEPAAPREPVRDALNRSYATGKRKDAVSRVWVKPGTGKITVNGKEADAYFARPVLQMVIAQPFGVAGVDGQFDVMCTVKGGGLSGQAGAVKHGISKALTLWDPSLRPALKAAGFLTRDSRVVERKKYGRRKARRSFQFSKR 163
BLAST of NO05G02940 vs. NCBI_GenBank
Match: PKA63731.1 (hypothetical protein AXF42_Ash017015 [Apostasia shenzhenica]) HSP 1 Score: 150.6 bits (379), Expect = 5.500e-33 Identity = 77/132 (58.33%), Postives = 92/132 (69.70%), Query Frame = 0
Query: 80 RLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
++D RAY TGRRK SVARVW++ G+G VN KE YF + +R L++PF +T T G +DV CTVKGGG +GQVGAV LGISRAL+ W+ RP L TRDSR VERKKPG+ KARK QWVKR
Sbjct: 292 KVDEKGRAYGTGRRKCSVARVWIQPGEGRFMVNDKEFDAYFPILDHRADLLQPFTITNTLGLWDVTCTVKGGGVSGQVGAVRLGISRALQHWEPGLRPYLKSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 423
BLAST of NO05G02940 vs. NCBI_GenBank
Match: XP_019155536.1 (PREDICTED: 37S ribosomal protein S9, mitochondrial [Ipomoea nil]) HSP 1 Score: 149.8 bits (377), Expect = 9.300e-33 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 0
Query: 80 RLDALNRAYATGRRKTSVARVWLKAGQGHIRVNGKEVYEYFGRVAYRDKLVEPFVVTGTAGDFDVMCTVKGGGTTGQVGAVALGISRALEVWDSAHRPPLAKESLFTRDSRAVERKKPGQPKARKKDQWVKR 212
++D R+Y TGRRK S+ARVW++ G G VN KE YF + +R L+ PF T T G +DV CTVKGGG +GQVGA+ LG+SRAL+ WD RPPL K TRDSR VERKKPG+ KARK QWVKR
Sbjct: 267 QVDEKGRSYGTGRRKCSIARVWIEPGDGKFVVNDKEFDVYFPMLDHRANLLRPFSETKTLGMWDVKCTVKGGGVSGQVGAIQLGVSRALQKWDPELRPPLRKGGFLTRDSRVVERKKPGRAKARKSFQWVKR 398 The following BLAST results are available for this feature:
BLAST of NO05G02940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02940 ID=NO05G02940|Name=NO05G02940|organism=Nannochloropsis oceanica|type=gene|length=890bpback to top protein sequence of NO05G02940.1 >NO05G02940.1-protein ID=NO05G02940.1-protein|Name=NO05G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=212bpback to top Synonyms
Publications
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