NO05G02910, NO05G02910 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02910
Unique Name	NO05G02910
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1125
Alignment location	chr5:763460..764584 +

Link to JBrowse

Properties


Property Name	Value
Description	tRNA (guanine-N(7)-)-methyltransferase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:763460..764584 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008176	tRNA (guanine-N7-)-methyltransferase activity
GO:0016740	transferase activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006400	tRNA modification
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases
IPR025763	Trm8_euk
IPR003358	tRNA_(Gua-N-7)_MeTrfase_Trmb

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Homology

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: EWM28158.1 (trna (guanine-n -)-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 470.3 bits (1209), Expect = 5.500e-129
Identity = 220/274 (80.29%), Postives = 242/274 (88.32%), Query Frame = 0

Query:  100 PWVPPKFVQEALGHLPIVEDGQHPQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAVVIQEMKQSWPEWTGENEEKEEE 374
            PWVPPKFVQEALGHLP+VEDGQHPQKRFYRSRAHCNPLSHNDA EYPP+P  M+W  LYP L +P VRFLDVGCGFGGLTVALS LFP+K++LALEIRAKVCEFVRLRI+EMRKE+ PRA NA VLKTNAMKYLPHFF KGQL+KIFFCFPDPHFK KNHRRRI+SERLLTEYAYLL EGG+LYAITDVEELH WHVAKL+EH SFER+P+E L GDVTV AIT ETEE KKVERA G+K+ CVFRRRPDAVVI   ++ WP W+ + E+ EEE
Sbjct:   19 PWVPPKFVQEALGHLPLVEDGQHPQKRFYRSRAHCNPLSHNDACEYPPHPGKMNWSVLYPGLTDPVVRFLDVGCGFGGLTVALSALFPDKIILALEIRAKVCEFVRLRIEEMRKEASPRARNAAVLKTNAMKYLPHFFRKGQLQKIFFCFPDPHFKTKNHRRRIVSERLLTEYAYLLQEGGILYAITDVEELHQWHVAKLSEHLSFERVPEETLAGDVTVTAITRETEESKKVERAGGRKYWCVFRRRPDAVVINASRRRWPVWSSDEEKHEEE 292

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: GAX92773.1 (Hypothetical protein PINS_000672 [Pythium insidiosum])

HSP 1 Score: 328.6 bits (841), Expect = 2.600e-86
Identity = 151/227 (66.52%), Postives = 176/227 (77.53%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPD 350
            PQK+FYRSRAHCNPLSHND+FEYP  P+AMDW   YP +  P V FLD+GCGFGGLTVAL  LFPE + L LEIR KV E+VRLRI+ +R E P + +N +V +TNAM+YLPH+F KGQL K+FFCFPDPHFK +NHRRRI++  LL EYAYLL  GG+LY ITDVE+LH+WHV K T H  FERIPDE L  D  V A+T ETEEGKKV R  GKK+  VFRR+ D
Sbjct:   14 PQKKFYRSRAHCNPLSHNDSFEYPLTPEAMDWSTYYPGIEKPHVDFLDIGCGFGGLTVALGELFPENLTLGLEIRPKVTEYVRLRIEALRVEQPGKFQNTSVFRTNAMRYLPHYFKKGQLSKMFFCFPDPHFKLRNHRRRIVNTNLLDEYAYLLKAGGILYTITDVEDLHNWHVEKCTNHPCFERIPDEELANDPCVKAMTEETEEGKKVARGGGKKYAAVFRRKAD 240

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: XP_024586627.1 (trna (guanine-n-)-methyltransferase [Plasmopara halstedii] >CEG50258.1 trna (guanine-n-)-methyltransferase [Plasmopara halstedii])

HSP 1 Score: 323.6 bits (828), Expect = 8.400e-85
Identity = 151/230 (65.65%), Postives = 179/230 (77.83%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAVV 353
            PQK+FYRSRAHCNPLSHND F+YP  PD MDW   YP + NP+V FLDVGCGFGGLTV L+ LFP+K+ LALEIRAKV E+VRLRI+ +R E+P R +N + L+TNAM+YLPH+F KGQ+ K+FFCFPDP FKA+ HRRRI+   LL EYAYLLA GG+LY ITDVEELH WHV K + H  F R+ D  L+ D  V A+T ETEEGKKV R  GKK+L VFRR+P+  V
Sbjct:   18 PQKKFYRSRAHCNPLSHNDCFDYPLTPDKMDWSAHYPNIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRNENPGRYQNVSTLRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLASGGILYTITDVEELHKWHVEKCSSHPCFIRMDDSELLSDPCVKAMTEETEEGKKVARGGGKKYLAVFRRKPNEEV 247

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: XP_008890803.1 (tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica INRA-310] >ETI56295.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P1569] >ETK96085.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >ETL49458.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >ETM02515.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >ETM55761.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica] >ETN24765.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica INRA-310] >ETO85039.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P1976] >ETP26097.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica CJ01A1] >ETP54088.1 tRNA (guanine-N(7)-)-methyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 321.6 bits (823), Expect = 3.200e-84
Identity = 149/225 (66.22%), Postives = 175/225 (77.78%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRR 348
            PQK+FYRSRAHCNPLSHND F YP  PD MDW   YP + NP+V FLDVGCGFGGLTV L+ LFP+K+ LALEIRAKV E+VRLRI+ +R E+P + +N + L+TNAM+YLPH+F KGQ+ K+FFCFPDP FKA+ HRRRI+   LL EYAYLLA GG+LY ITDVEELH WHV K + H  F RIPD  L  D  V A+T ETEEGKKV R  GKK++ VFRR+
Sbjct:   17 PQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRSENPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHQWHVEKCSSHPCFTRIPDSELESDPCVKAMTEETEEGKKVARGGGKKYVAVFRRK 241

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: OWY93711.1 (TRNA (guanine-N(7)-)-methyltransferase, partial [Phytophthora megakarya])

HSP 1 Score: 319.7 bits (818), Expect = 1.200e-83
Identity = 147/225 (65.33%), Postives = 174/225 (77.33%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRR 348
            PQK+FYRSRAHCNPLSHND F YP  PD MDW   YP + NP+V FLDVGCGFGGLTV L+ LFP+K+ LA+EIRAKV E+VRLRI+ +R E P + +N + L+TNAM+YLPH+F KGQ+ K+FFCFPDP FKA+ HRRRI+   LL EYAYLLA GG+LY ITDVEELH WHV K + H  F RIPD  L  D  + A+T ETEEGKKV R  GKK++ VFRR+
Sbjct:   18 PQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPSVDFLDVGCGFGGLTVKLAELFPDKLTLAMEIRAKVTEYVRLRIEALRNEKPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHEWHVEKCSSHPCFTRIPDSELDSDPCIKAMTEETEEGKKVARGGGKKYVAVFRRK 242

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: OQS01700.1 (tRNA (guanine-N(7)-)-methyltransferase [Achlya hypogyna])

HSP 1 Score: 317.8 bits (813), Expect = 4.600e-83
Identity = 152/240 (63.33%), Postives = 185/240 (77.08%), Query Frame = 0

Query:  117 VEDGQHPQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKE---SPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDER-LVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAVV 353
            VE    PQK+FYRSRAHCNPLSHND+F+YP  P  MDW   YP +  P V FLDVGCGFGGLT+AL+TLFPE + LA+EIR KV E+VRLRI  +R++   +    +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRI++  LLTEYAYL+AEGG+LY ITDVE+LH+WHVAK   H  FERI DE  L  D  V A+T ETEEGKKV R+ GKK++ V+RR PDA V
Sbjct:   11 VEIAGMPQKKFYRSRAHCNPLSHNDSFDYPLRPSEMDWSTHYPNIDAPKVEFLDVGCGFGGLTIALATLFPENLTLAMEIRPKVTEYVRLRIDALRQDALATTKAYQNVSVLRTNAMRYLPHYFEKGQIKKMFFCFPDPQFKVRNHRRRIVNTHLLTEYAYLIAEGGILYTITDVEDLHNWHVAKCDAHPCFERITDEADLEADPCVKAMTEETEEGKKVARSGGKKYVAVYRRIPDATV 250

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: OQS06972.1 (tRNA (guanine-N(7)-)-methyltransferase [Thraustotheca clavata])

HSP 1 Score: 317.4 bits (812), Expect = 6.000e-83
Identity = 150/234 (64.10%), Postives = 184/234 (78.63%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRK---ESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPD-ERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAVV 353
            PQK+FYRSRAHCNPLSHND+F YP  P+AMDW   YP + NP V FLDVGCGFGGLT+AL+TLFPE + LA+EIR KV E+VRLRI+ +RK   E+    +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRI++  LLTEYAYL+AEGG+LY ITDVE+LH+WHVAK   H  FERI D   L  D  V A+T ETEEGKKV R+ GKK++ V+RR  +A +
Sbjct:   19 PQKKFYRSRAHCNPLSHNDSFVYPLRPNAMDWSTHYPNIENPKVEFLDVGCGFGGLTIALATLFPENLTLAMEIRPKVTEYVRLRIEALRKDSLETTKAYQNVSVLRTNAMRYLPHYFEKGQIKKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYLIAEGGILYTITDVEDLHNWHVAKCDAHPCFERITDAAELEADPCVKAMTEETEEGKKVARSGGKKYIAVYRRLKNATI 252

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: XP_008874402.1 (tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces invadans] >ETV97156.1 tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces invadans])

HSP 1 Score: 316.2 bits (809), Expect = 1.300e-82
Identity = 150/232 (64.66%), Postives = 180/232 (77.59%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKE--SPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDER-LVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAV 352
            PQK+FYRSRAHCNPLSHND FEYP NP  MDW   YP L NP V FLD+GCGFGGLT+AL+ LFP K  LA+EIR KV E+VRLRI+ +R+E  S  + +N +VL+TNAM+YLPH+F KGQ+EK+FFCFPDP FK +NHRRRI++  LLTEYAY + EGG+LY ITDVE+LH+WHVAK   H  FERI D+  L  D  V A+T ETEEGKKV R+ G K++ V+RR  DAV
Sbjct:   25 PQKKFYRSRAHCNPLSHNDLFEYPLNPTEMDWSAHYPKLDNPKVNFLDIGCGFGGLTIALANLFPNKTTLAMEIRPKVTEYVRLRIEALRQEHASSNQFQNVSVLRTNAMRYLPHYFEKGQIEKMFFCFPDPQFKQRNHRRRIVNTHLLTEYAYFIPEGGILYTITDVEDLHNWHVAKCDSHPCFERITDDAVLKADPCVQAMTEETEEGKKVARSGGNKYVAVYRRVSDAV 256

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: KUG00634.1 (tRNA (guanine-N(7)-)-methyltransferase [Phytophthora nicotianae])

HSP 1 Score: 314.7 bits (805), Expect = 3.900e-82
Identity = 149/232 (64.22%), Postives = 175/232 (75.43%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANP-------TVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRR 348
            PQK+FYRSRAHCNPLSHND F YP  PD MDW   YP + NP       +V FLDVGCGFGGLTV L+ LFP+K+ LALEIRAKV E+VRLRI+ +R E+P + +N + L+TNAM+YLPH+F KGQ+ K+FFCFPDP FKA+ HRRRI+   LL EYAYLLA GG+LY ITDVEELH WHV K + H  F RIPD  L  D  V A+T ETEEGKKV R  GKK++ VFRR+
Sbjct:   17 PQKKFYRSRAHCNPLSHNDCFNYPQTPDEMDWSTHYPGIENPYESTLIRSVDFLDVGCGFGGLTVKLAELFPDKLTLALEIRAKVTEYVRLRIEALRSENPGQFQNVSALRTNAMRYLPHYFRKGQITKMFFCFPDPQFKARLHRRRIVHTPLLAEYAYLLAPGGILYTITDVEELHQWHVEKCSSHPCFTRIPDSELESDPCVKAMTEETEEGKKVARGGGKKYVAVFRRK 248

[Close]

BLAST of NO05G02910 vs. NCBI_GenBank
Match: XP_009832882.1 (tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces astaci] >ETV77772.1 tRNA (guanine-N(7)-)-methyltransferase [Aphanomyces astaci])

HSP 1 Score: 311.6 bits (797), Expect = 3.300e-81
Identity = 148/233 (63.52%), Postives = 183/233 (78.54%), Query Frame = 0

Query:  123 PQKRFYRSRAHCNPLSHNDAFEYPPNPDAMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKVCEFVRLRIQEMRKE--SPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFPDPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLTEHASFERIPDER-LVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDAVV 353
            PQK+FYRSRAHCNPLSHND+F+YP NP  M+W   +P L NP V  LD+GCGFGGLT+AL+ LFP+K  LA+EIR KV E+VRLRI+ +R+E  S  + +N +VL+TNAM+YLPH+F KGQ++K+FFCFPDP FK +NHRRRI++  LL EYAYL+ EGG+LY ITDVE+LH+WHVAK   H  FERI DE  L  D  VAA+TNETEEGKKV R+ G K++ V+RR  DA V
Sbjct:   25 PQKKFYRSRAHCNPLSHNDSFDYPLNPADMNWSTHFPKLENPKVDILDIGCGFGGLTIALAGLFPDKTTLAMEIRPKVTEYVRLRIEALRQENASTNQFQNVSVLRTNAMRYLPHYFEKGQIQKMFFCFPDPQFKQRNHRRRIVNTHLLAEYAYLIPEGGILYTITDVEDLHNWHVAKCDAHPCFERITDEAVLSADPCVAAMTNETEEGKKVARSGGNKYIAVYRRVSDAHV 257

The following BLAST results are available for this feature:

BLAST of NO05G02910 vs. NCBI_GenBank

BLAST of NO05G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28158.1	5.500e-129	80.29	trna (guanine-n -)-methyltransferase [Nannochlorop...	[more]
GAX92773.1	2.600e-86	66.52	Hypothetical protein PINS_000672 [Pythium insidios...	[more]
XP_024586627.1	8.400e-85	65.65	trna (guanine-n-)-methyltransferase [Plasmopara ha...	[more]
XP_008890803.1	3.200e-84	66.22	tRNA (guanine-N(7)-)-methyltransferase [Phytophtho...	[more]
OWY93711.1	1.200e-83	65.33	TRNA (guanine-N(7)-)-methyltransferase, partial [P...	[more]
OQS01700.1	4.600e-83	63.33	tRNA (guanine-N(7)-)-methyltransferase [Achlya hyp...	[more]
OQS06972.1	6.000e-83	64.10	tRNA (guanine-N(7)-)-methyltransferase [Thraustoth...	[more]
XP_008874402.1	1.300e-82	64.66	tRNA (guanine-N(7)-)-methyltransferase [Aphanomyce...	[more]
KUG00634.1	3.900e-82	64.22	tRNA (guanine-N(7)-)-methyltransferase [Phytophtho...	[more]
XP_009832882.1	3.300e-81	63.52	tRNA (guanine-N(7)-)-methyltransferase [Aphanomyce...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL083	nonsL083	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR121	ngnoR121	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003627	NSK003627	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02910.1	NO05G02910.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584555	gene_3097	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g165	gene2409	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02910.1	NO05G02910.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02910 ID=NO05G02910|Name=NO05G02910|organism=Nannochloropsis oceanica|type=gene|length=1125bp
ATGAGCGGAGGCCTACCAAGCCCTAGTAATTTCTACGCATTGTTGATACA
CACCACAAACTATCACACCGAATTAAAGGAGAACTTGTGCTCTAGTTGTA
ATAACCTCCCCACACCTCCCAACTTACTATCATTCTACCATCCAGAGCCA
CCACCAACATCAGCACCACCAATTGCAGCAGCAGCCACAGCAGCCGCAGC
AGCCACAGCAGCCACAGCAGCCATGTCTGACACTCAACACAATGGAGGAG
ACGCCGGGGCCAGTAGCAGCAATGATAGCGGCGGGAATAAGAAAAGGCCT
TGGGTGCCACCCAAGTTTGTGCAGGAGGCGCTGGGTCACTTGCCAATTGT
TGAGGACGGACAACATCCCCAGAAGCGTTTTTATCGTTCCCGCGCGCATT
GTAACCCCTTATCCCACAACGATGCCTTCGAGTATCCTCCCAACCCTGAT
GCAATGGATTGGTGCCCGCTCTACCCCGCCCTTGCCAACCCCACTGTGCG
CTTCTTGGATGTTGGCTGCGGGTTCGGCGGCCTGACAGTGGCGCTCTCAA
CTCTCTTCCCCGAAAAAGTGGTTTTGGCCTTAGAAATCCGAGCCAAGGTG
TGCGAATTTGTGCGTCTCCGCATTCAGGAAATGCGGAAGGAGTCCCCCCC
CCGGGCTGAGAACGCCAACGTCCTCAAAACCAACGCCATGAAATACCTTC
CCCACTTCTTTCACAAAGGCCAACTCGAGAAGATTTTCTTCTGCTTCCCC
GATCCACATTTCAAAGCCAAGAACCACCGGCGCCGGATTATCAGTGAGCG
ATTGCTGACTGAGTATGCCTATTTGCTCGCGGAAGGCGGACTTCTTTACG
CCATCACCGACGTGGAAGAGCTCCACCATTGGCATGTGGCCAAGCTTACG
GAACACGCTAGCTTCGAGCGGATTCCTGACGAGCGATTGGTAGGGGACGT
CACGGTTGCAGCAATTACCAACGAGACGGAGGAAGGCAAGAAGGTAGAGC
GCGCGAAGGGCAAGAAATTTTTGTGCGTCTTTCGAAGACGCCCTGACGCG
GTGGTGATCCAGGAAATGAAGCAGAGCTGGCCGGAGTGGACAGGAGAGAA
CGAAGAGAAGGAAGAGGAAGAATAG

protein sequence of NO05G02910.1

>NO05G02910.1-protein ID=NO05G02910.1-protein|Name=NO05G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MSGGLPSPSNFYALLIHTTNYHTELKENLCSSCNNLPTPPNLLSFYHPEP
PPTSAPPIAAAATAAAAATAATAAMSDTQHNGGDAGASSSNDSGGNKKRP
WVPPKFVQEALGHLPIVEDGQHPQKRFYRSRAHCNPLSHNDAFEYPPNPD
AMDWCPLYPALANPTVRFLDVGCGFGGLTVALSTLFPEKVVLALEIRAKV
CEFVRLRIQEMRKESPPRAENANVLKTNAMKYLPHFFHKGQLEKIFFCFP
DPHFKAKNHRRRIISERLLTEYAYLLAEGGLLYAITDVEELHHWHVAKLT
EHASFERIPDERLVGDVTVAAITNETEEGKKVERAKGKKFLCVFRRRPDA
VVIQEMKQSWPEWTGENEEKEEEE*

Synonyms

Publications