NO05G02850, NO05G02850 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02850
Unique Name	NO05G02850
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4437
Alignment location	chr5:744819..749255 -

Link to JBrowse

Properties


Property Name	Value
Description	Derlin

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:744819..749255 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005783	endoplasmic reticulum
GO:0005737	cytoplasm

Homology

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: EWM28194.1 (Derlin [Nannochloropsis gaditana])

HSP 1 Score: 438.7 bits (1127), Expect = 4.400e-119
Identity = 208/231 (90.04%), Postives = 222/231 (96.10%), Query Frame = 0

Query:  662 ETGPWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLVRQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTYHHEEAPGAVRVDFAP 893
            E GPWVWYMEMPVVSR+YLTASVLTTAACALDL+SPF+LYFNLSLVR+GQVWRLFTNF+YFGN SLDFLFHMYFLVRYCRLLEEGTFRGRTADF+FMI  GA+MITCIAPF+RPSIPFLGSSLTFMMVYVWGR+NEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGI+VGHTYYFLEFVFPVVAEARGWP+RRL HTPA+LHY CGTYHHE+   AV+VDFAP
Sbjct:   92 EMGPWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVREGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHED---AVQVDFAP 319

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_008621042.1 (hypothetical protein SDRG_16604 [Saprolegnia diclina VS20] >EQC25521.1 hypothetical protein SDRG_16604 [Saprolegnia diclina VS20])

HSP 1 Score: 309.7 bits (792), Expect = 3.100e-80
Identity = 147/214 (68.69%), Postives = 179/214 (83.64%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTY 878
            P  WY E+PV+SR+YLT + LTTAACAL+L+SPF+LYFN +L+  +GQVWRL TNF++FG FSLDFLFHMYFLVRY R+LEEG+FRGRTADF++MILFGA  +  +APF+  S+ FLGSSLTFMMVY+WGR+NEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGI+VGH YYF E V+P +A+ RGW VRR+  TPA + + C  +
Sbjct:    4 PLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFV--SVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPTIADIRGWRVRRVLKTPAFVKFLCNPH 215

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_012196981.1 (hypothetical protein SPRG_03010 [Saprolegnia parasitica CBS 223.65] >KDO32535.1 hypothetical protein SPRG_03010 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 309.7 bits (792), Expect = 3.100e-80
Identity = 147/214 (68.69%), Postives = 179/214 (83.64%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTY 878
            P  WY E+PV+SR+YLT + LTTAACAL+L+SPF+LYFN +L+  +GQVWRL TNF++FG FSLDFLFHMYFLVRY R+LEEG+FRGRTADF++MILFGA  +  +APF+  S+ FLGSSLTFMMVY+WGR+NEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGI+VGH YYF E V+P +A+ RGW VRR+  TPA + + C  +
Sbjct:    4 PLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFV--SVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRVLKTPAFVKFLCNPH 215

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_002291637.1 (hypothetical protein THAPSDRAFT_6534 [Thalassiosira pseudonana CCMP1335] >EED91744.1 hypothetical protein THAPSDRAFT_6534 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 308.1 bits (788), Expect = 9.000e-80
Identity = 139/211 (65.88%), Postives = 177/211 (83.89%), Query Frame = 0

Query:  668 WYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTY 878
            WYME+P++SR+Y T + LTTA CALD++SPF+LYFN  L+  QGQ+WRL T +++FG FS+DFLFHMYFLVRYCR+LEEG FRG+TA+F+ MI+FG   +T +APF+  S+ FLGSSLTFMMVYVWGR+NE +R++FL +F F APYLPWV+LTFSM+LGNP TID IGI+VGHTYYFLE+V+PV+AE RGW  +R+   P +LH+ CGTY
Sbjct:    3 WYMEIPIISRLYFTGAFLTTAGCALDIISPFSLYFNFDLIFFQGQIWRLITTYLFFGMFSIDFLFHMYFLVRYCRMLEEGDFRGKTANFVMMIMFGVIFMTAVAPFV--SVHFLGSSLTFMMVYVWGRRNEDMRMSFLGVFTFNAPYLPWVMLTFSMLLGNPVTIDAIGILVGHTYYFLEYVYPVLAEIRGWRRKRIMEPPRLLHWICGTY 211

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: CBN78894.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 305.8 bits (782), Expect = 4.500e-79
Identity = 177/432 (40.97%), Postives = 256/432 (59.26%), Query Frame = 0

Query:  143 LFKLFADVSEICRDMAIHLTSILFSSVQDIPSSVLDHFFAVVRVRQPPC-ACYDPTAQLFVQDPQAYEAYQRGKAIVPGQGTVTQWACV-ESSEEVRLRICRLLHQLVYLALERGSESGLRPYFHDLVLFFHGFSLDPFAVLQIEACTAMSTLARSFAFELGMKLYAVGLVRAILPLLHHRLSKVRIAAIAAIQDLVKVPDRGKRKGAGTDAIVELVGFRAENVLPISVFY-RADVSFNYLAQLSQDAHPMVRKSLVNMLAEWLTQLPDRYDHETRLLPFLLNGLNDPVQENQVHALKALAKCADLYVRDNEEEIRAYQLLDAPINYTAHLAPALPLPFQERPNLATRLYVRTNTRRILPALLEELSHWMASARQLSAKLLRALIIFYENSFKDDLPILLPALLKALAFAHEVGEDQGEFAATLTHCAELIG 572
            +FK  AD +E CR+ +I   ++    V D+ +  L + F V+  R  P  + YDP+ +LFV D   +EAY+RG+A       + Q   + E SEE+RL +CR++ +++   ++RG+   LRPY  D +L       DP++ +++EA + ++TL      E GMK YAVG+ RAILP L HR +KVR+AAI A++  V VPDR K KGAGT AIV+LVGFR +NVLPI+ FY R D + NYLA+L+ D    VR     ML++WLT LPDRYDH+TRLLP++LN + D  +     A++ L+KC   Y R+++++I   +      +  A+    LP PF  RP +  RLYVR NTRR L  LL E+S+W++  R  SA L R L+++ E     +   L+P L +AL  A    E        +  C EL+G
Sbjct:   53 VFKGLADPAEACREASIKAVALFMEHVPDL-TPHLAYLFPVLMARAVPAGSLYDPSLELFVHDNDEHEAYKRGRATERQDQHLPQVQHIAEGSEELRLSLCRMVGRMLGKLMDRGTIGVLRPYLDDTILLLVSQFRDPYSAVKVEALSIVTTLVLHPHVEQGMKFYAVGISRAILPHLRHRHAKVRLAAIKALRLAVMVPDRAKVKGAGTSAIVDLVGFREDNVLPIAAFYGRGDTTVNYLAELTTDRSVSVRAETTAMLSDWLTSLPDRYDHQTRLLPYVLNAIADEAEVVSTVAVETLSKCGAEYEREHQDDIIERRQFGVDGDIRANHTKPLPHPFPGRPRIGARLYVRGNTRRFLMPLLAEMSNWISKTRLQSALLFRTLVVYCEEHLTVETHKLIPHLQRALRLA--TNEKDHLLEDIILDCCELVG 481

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_008874664.1 (hypothetical protein H310_10163 [Aphanomyces invadans] >ETV96887.1 hypothetical protein H310_10163 [Aphanomyces invadans])

HSP 1 Score: 303.1 bits (775), Expect = 2.900e-78
Identity = 143/223 (64.13%), Postives = 179/223 (80.27%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTYHHEEAPGAV 887
            P  WY E+PV+SR+YLT + LTT ACAL+L+SPF+LYFN +L+  +GQVWRL TNF++FG FSLD++FHMYFLVRY R+LEEG+FRGRTADF++M+L GA  +  +APF+  S+ FLGSSLTFMMVYVWGR+NEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGI+VGH YYF E V+P +A+ RGW VRR+  TP  + + C  + +  A   +
Sbjct:    4 PLEWYHEIPVISRLYLTGAFLTTVACALELISPFSLYFNFNLIFYRGQVWRLVTNFLFFGLFSLDYIFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGAVSMILVAPFV--SVHFLGSSLTFMMVYVWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHVYYFFEDVYPAIADIRGWRVRRILETPTFVKFLCNPHAYTAAAAPI 224

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_009841117.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV69260.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 302.4 bits (773), Expect = 4.900e-78
Identity = 142/214 (66.36%), Postives = 176/214 (82.24%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTY 878
            P  WY E+P++SR+YLT + LTT ACAL+L+SPF+LYFN +L+  +GQVWRL TNF++FG FSLDF+FHMYFLVRY R+LEEG+FRGRTADF++M+L GA  +  +APF+  S+ FLGSSLTFMMVYVWGR+NEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGI+VGH YYF E V+P +A+ RGW VRR+  TP  + + C  +
Sbjct:    4 PLEWYYEIPIISRLYLTGAFLTTVACALELISPFSLYFNFNLIFYRGQVWRLVTNFLFFGLFSLDFIFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGALTMILVAPFV--SVHFLGSSLTFMMVYVWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRILETPTFVKFLCNPH 215

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: EJK49946.1 (hypothetical protein THAOC_31124 [Thalassiosira oceanica])

HSP 1 Score: 301.6 bits (771), Expect = 8.400e-78
Identity = 138/215 (64.19%), Postives = 173/215 (80.47%), Query Frame = 0

Query:  668 WYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTYHHEE 882
            WYM +PVVSR+Y T + LTTA CALD++SPF+LYFN  L+  QGQ+WRL T +++FG FS+DF+FHMYFLVRYCR+LEEG FRGRTA F+ MI+FG   +T +APF+  S+ FLGSSLTFMM YVWGR+NE +R+ FL +F F APYLPWV+LTFS++LGN  TID IGI+VGHTYYFLE+V+P VAE RGW  +R+   P +LH+ CGTYH  +
Sbjct:   19 WYMGIPVVSRLYFTGAFLTTAGCALDIISPFSLYFNWDLIFFQGQIWRLLTTYLFFGMFSIDFMFHMYFLVRYCRMLEEGDFRGRTAHFVMMIMFGVIFMTAVAPFV--SVHFLGSSLTFMMTYVWGRRNEDMRMAFLGIFTFNAPYLPWVMLTFSLLLGNSITIDAIGILVGHTYYFLEYVYPKVAEIRGWKRKRILEPPRILHWICGTYHEHQ 231

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: OWZ07365.1 (hypothetical protein PHMEG_00020253 [Phytophthora megakarya])

HSP 1 Score: 301.2 bits (770), Expect = 1.100e-77
Identity = 151/228 (66.23%), Postives = 180/228 (78.95%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHYFCGTYHHEEAPGAVRVDFA 892
            P  WY E+PVVSR+YLT S LTT ACALDLVSPF+LYFN +L+  +GQVWRL TNFM+FG FSLDFLFHMYF+VRYCRLLEEG+FRGRTADF++M+L GA  +  +APF+  +I FLGSSLTFMMVY+WGR+NEHVR++FL LFPFTAPYLPWVL +FS++LGN AT D+IGIIVGH YYFLE V+P +A  RGW  +R   TP ++ Y         A G V  DFA
Sbjct:    4 PLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLATNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVFMIVLAPFV--NIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLETPRIIRYMFDP-RPAVADGEVINDFA 228

[Close]

BLAST of NO05G02850 vs. NCBI_GenBank
Match: XP_009523839.1 (hypothetical protein PHYSODRAFT_490756 [Phytophthora sojae] >EGZ21122.1 hypothetical protein PHYSODRAFT_490756 [Phytophthora sojae])

HSP 1 Score: 300.4 bits (768), Expect = 1.900e-77
Identity = 145/209 (69.38%), Postives = 175/209 (83.73%), Query Frame = 0

Query:  665 PWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNLYFNLSLV-RQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRGRTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFPVVAEARGWPVRRLFHTPAMLHY 873
            P  WY E+PVVSR+YLT S LTT ACALDLVSPF+LYFN +L+  +GQVWRL TNFM+FG FSLDFLFHMYF+VRYCRLLEEG+FRGRTADF++M+L GA ++  +APF+  +I FLGSSLTFMMVY+WGR+NEHVR++FL LFPFTAPYLPWVL +FS++LGN AT D+IGIIVGH YYFLE V+P +A  RGW  +R   TP ++ Y
Sbjct:    4 PLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLVTNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVVMILVAPFV--NIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLATPRIIRY 210

The following BLAST results are available for this feature:

BLAST of NO05G02850 vs. NCBI_GenBank

BLAST of NO05G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28194.1	4.400e-119	90.04	Derlin [Nannochloropsis gaditana]	[more]
XP_008621042.1	3.100e-80	68.69	hypothetical protein SDRG_16604 [Saprolegnia dicli...	[more]
XP_012196981.1	3.100e-80	68.69	hypothetical protein SPRG_03010 [Saprolegnia paras...	[more]
XP_002291637.1	9.000e-80	65.88	hypothetical protein THAPSDRAFT_6534 [Thalassiosir...	[more]
CBN78894.1	4.500e-79	40.97	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_008874664.1	2.900e-78	64.13	hypothetical protein H310_10163 [Aphanomyces invad...	[more]
XP_009841117.1	4.900e-78	66.36	hypothetical protein, variant [Aphanomyces astaci]...	[more]
EJK49946.1	8.400e-78	64.19	hypothetical protein THAOC_31124 [Thalassiosira oc...	[more]
OWZ07365.1	1.100e-77	66.23	hypothetical protein PHMEG_00020253 [Phytophthora ...	[more]
XP_009523839.1	1.900e-77	69.38	hypothetical protein PHYSODRAFT_490756 [Phytophtho...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL083	nonsL083	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR121	ngnoR121	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003620	NSK003620	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02850.1	NO05G02850.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584530	gene_3090	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g172	gene2416	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02850.1	NO05G02850.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02850 ID=NO05G02850|Name=NO05G02850|organism=Nannochloropsis oceanica|type=gene|length=4437bp
ATGGATGTCGTCCTTCAAGAGCTTAAAAGGGATGATGAAATTGCTTTGCA
GGCTCAGGTCAAAAAAGCAGCGTCACGGGTGGCTCGATGTCGCCCATCCT
CGCGCTCGTTCCACTCCTCTCAGCTGCAGTGTTGCGCGCCCTCCGTGTTT
CCAGCGGCCGAATCTGCGGTATCTTACATGCAAGAACGCCGACTAAGAGT
CCAAACGCAGCAACGAGTGGCCGGAAATTCGCCCGTGATGCAGCTGTCGC
CACTACTTGGGCTGCGTGTTGATCGAGACTTACATCGTCTTGACAGCGAA
GTGCTCTCAGTACGGAAGGAGGCCTTGTCATCGCTGCACGAATTCTTTGC
ACCTTCCACTGTGACGCGTTTGCAGgtacggtttcattatttcatgatca
gaggattcgataatttgatcaaacttttgagaggcagtccaggagggccc
gcaaatccaaaagctcgcgcatacgcgattgtatactctccttcacgtgt
acacttgctgtgtgtcacacctctagtcacgagactcctgaacacactgt
cccatgcgattaaatcataaaattcatccctttcccggcacattcacgcg
tgcacatgcgccaccgtgtcacagGCGTTGAGGTGCGACGAGCATCAAGC
TTTTCTGTCACAGGTTCATTTGCCACTCTTCAAGTTGTTTGCTGATGTGT
CCGAGATTTGTCGTGACATGGCTATTCATTTGACATCCATCCTCTTTAGC
TCGGTTCAAGATATTCCATCTTCGGTGTTGGACCACTTTTTCGCGgtagg
tttcagcttgagagtgcggagggggtcgatcgttgtctaaccacaaaagc
tttacatatccctgaatatttcacagGTTGTCAGAGTTCGTCAACCGCCC
TGTGCCTGCTATGATCCCACGGCTCAACTTTTTGTGCAGGATCCTCAAGC
TTACGAAGCCTATCAAAGAGGAAAGGCTATCGTGCCAGGCCAGgtcagtc
ttatattgtctaagagattcatcccgtctacttgaaaacgacagaaccag
aacgacaaaacctattcaaaggccatatattttacttgacattaacagGG
CACGGTCACTCAATGGGCATGTGTTGAGTCTTCCGAAGAAGTCCGTCTTC
GCATATGTCGACTGCTCCATCAACTTGTGTATTTGGCCTTGGAACGAGGA
TCTGAGTCTGGCCTGCGCCCATACTTCCACGATTTGGTTCTCTTCTTTCA
TGGATTCTCGCTAGATCCGTTTGCAgtacgtatttgtggatttcctttta
ccatggctgatctgagacacgctgatcagctcctttgtgtcactaacagG
TGTTGCAAATTGAAGCCTGCACAGCAATGAGCACTTTGGCTCGTAGCTTC
GCGTTTGAGgtgcgtgtgtatgcgaagggactgctgtgagagttgtcatg
ccgtatgtctacgttcaacttttgcaagaaaccaataaatgacaaaatta
caacctattcggttctaaagCTCGGCATGAAGTTATATGCGGTGGGCCTG
GTACGCGCGATCCTACCGCTTCTCCACCACCGGCTTTCGAAAGTGCGCAT
TGCCGCTATTGCTGCCATCCAGGATTTGGTTAAGGTGCCGGACCGCGGAA
AACGGAAAGGTGCGGGAACGGACGCGATCGTAGAGCTGGTTGGGTTCCGC
GCCGAAAATGTCCTTCCCATTTCAGTTTTTTATCGTGCCGACGTGTCATT
CAATTATTTGGCCCAGgtaagataacggaagtctacttgcatatcttaca
tgtaaaaggagcttgagccaatatatatacacacctgtttgccacgcata
cagCTATCCCAAGATGCGCATCCCATGGTGCGAAAAAGTCTCGTGAATAT
GCTGGCAGAATGGCTGACCCAGTTGCCTGATAGATACGACCACGAGACTC
GCCTCCTCCCTTTCCTCTTGAACGGCCTAAACGACCCAGTCCAGgtacgg
cgtccaaccctttcatcatagcataccgcttcaaggcgatccagtctgcc
tatatacgatgtcagctattgattattgattccttaagctttcaatgctt
cgcttgcgttaacatgaactctaaacccatagGAAAACCAGGTACACGCA
CTAAAGGCGTTGGCGAAGTGCGCGGACTTGTACGTCCGGGACAACGAGGA
GGAGATCCGGGCGTACCAGCTACTGGATGCGCCTATAAATTACACGGCTC
ACCTCGCTCCTGCACTTCCTTTACCGTTTCAAGAGCGCCCAAATCTGGCG
ACGAGGCTCTATGTTCGCACAAATACTCGGCGGATCCTGCCCGCCTTGTT
GGAGGAACTGTCGCATTGGATGGCCTCCGCCCGACAGCTCAGCGCCAAAC
TCTTGCGCGCGCTCATTATCTTCTATGAAAATTCTTTTAAGGACGACTTG
CCAATACTGCTGCCTGCGTTGCTCAAGGCCCTCGCCTTCGCCCACGAAGT
CGGGGAGGACCAAGGGGAGTTCGCGGCCACCTTGACCCACTGCGCTGAGC
TGATAGGTTGGTTTTGCTTCAATGCGACGTCATCGTCCATCGCCACCCCT
CCCTTGGACCCGTCTGTATTCCTTCCCGAAGAGACGACCATCAGCAGCAG
CACCAACAGCACCCGCCGTCGTCTTGCCCGGACCACCTTGCTGGCCCATT
TTCGAGCTCTTGGAGgtgaggaggggtgagtaggcatgtcttcaaaagta
gcagacttgcacaaatgaagaaatcgcgtcaattcaaagtagctattctt
catgttttctttttcttggctacgttcggacttacgacaagttttgtgag
aggaacttggatcgctcaagtcgaagacgactgtgcgctcgcccaagcaa
gccattttgaacgaagcagaactctttggtatgacactgagcctttttgc
tcgctcagtactacgactccctcccatgagaaacacgcagtgacggtact
gtcgggcatctagcgccccatttttcatcgcccttgcatcgctttttgaa
gctctaaccaaaccccccgcccattcccatcatcatcaacctcgttgtct
ttgctagttggcgtcatttgtgagcctaccaaactccctcacagctatac
aatcctcattcttcccgtataacacagGCAAAATAGCTATGTTTGATCAA
CACCAAGATGAAAATGAGCCAGAGCGTCCGGGGCAGCAAAACCAGCACCA
GCACCAGCAGCAGAATCACCACCAGCCTCCTCCCGTTGGAGAGACAGGAC
CTTGGgtacgtgaaaagagatacatacctttctatctgaagggtggaatg
ggatgggatggacaaaagtgcagtgtaaatgacatgtcgatgcatgctag
cgcattaataggaacttttctccggtacaagagaagcgggaggaagcaag
aagagagacccacgtgcacgtgtgtgcatttgctctggcacttcttagag
cttttaaaaccaattgtaatcacgcgcactccagcccttactccttacac
tcaggagttccgtatatgaggcatccaactcactgatttctcccgtccct
cttgctcttcgcctctactcccccttcctccctcccaatctccatcccca
gGTTTGGTACATGGAAATGCCCGTCGTCTCACGGGTCTACTTAACAGCTT
CAGTCCTGACCACGGCGGCCTGCGCCCTGGACCTTGTCTCACCCTTCAAC
CTCTATTTCAACCTGAGCCTGGTCCGTCAAGGCCAAGTCTGGCGTTTATT
CACAAATTTCATGTACTTCGGCAATTTCTCGTTAGACTTCCTCTTCCATA
TGTACTTCCTTGTCCGCTACTGCCGCCTGCTAGAAGAAGGCACCTTCCGC
GGACGTACGGCTGATTTCATCTTCATGATTTTGTTCGGGGCCACGATGAT
TACGTGCATCGCGCCCTTCATCCGTCCCTCTATCCCCTTCCTCGGCTCCT
CCCTCACCTTCATGATGGTCTACGTCTGGGGGCGACAAAACGAACACGTC
CGGCTGACCTTCCTGAATCTTTTCCCGTTCACCGCACCTTATCTCCCTTG
GGTCCTCTTGACGTTTTCCATGGTCTTGGGTAACCCTGCCACTATTGACG
TCATCGGCATCATCGTCGGTCACACCTATTACTTCCTCGAATTTGTATTC
CCCGTCGTCGCTGAAGCCCGAGGGTGGCCTGTCCGCCGTTTGTTCCATAC
CCCCGCAATGCTGCATTACTTCTGCGGCACATATCACCACGAGGAAGCTC
CTGGGGCCGTGCGCGTTGATTTTGCCCCAGCGCATGCCAACGCCGCCGCG
CCACCACCACCACCGGCAGCAGCAGGAGCAGGAGCAGGAGCTGGAGGAGG
AGGAGCAGGAGGAGGGCAGCATCTGCATGAAGACTAA

protein sequence of NO05G02850.1

>NO05G02850.1-protein ID=NO05G02850.1-protein|Name=NO05G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=928bp
MDVVLQELKRDDEIALQAQVKKAASRVARCRPSSRSFHSSQLQCCAPSVF
PAAESAVSYMQERRLRVQTQQRVAGNSPVMQLSPLLGLRVDRDLHRLDSE
VLSVRKEALSSLHEFFAPSTVTRLQALRCDEHQAFLSQVHLPLFKLFADV
SEICRDMAIHLTSILFSSVQDIPSSVLDHFFAVVRVRQPPCACYDPTAQL
FVQDPQAYEAYQRGKAIVPGQGTVTQWACVESSEEVRLRICRLLHQLVYL
ALERGSESGLRPYFHDLVLFFHGFSLDPFAVLQIEACTAMSTLARSFAFE
LGMKLYAVGLVRAILPLLHHRLSKVRIAAIAAIQDLVKVPDRGKRKGAGT
DAIVELVGFRAENVLPISVFYRADVSFNYLAQLSQDAHPMVRKSLVNMLA
EWLTQLPDRYDHETRLLPFLLNGLNDPVQENQVHALKALAKCADLYVRDN
EEEIRAYQLLDAPINYTAHLAPALPLPFQERPNLATRLYVRTNTRRILPA
LLEELSHWMASARQLSAKLLRALIIFYENSFKDDLPILLPALLKALAFAH
EVGEDQGEFAATLTHCAELIGWFCFNATSSSIATPPLDPSVFLPEETTIS
SSTNSTRRRLARTTLLAHFRALGGKIAMFDQHQDENEPERPGQQNQHQHQ
QQNHHQPPPVGETGPWVWYMEMPVVSRVYLTASVLTTAACALDLVSPFNL
YFNLSLVRQGQVWRLFTNFMYFGNFSLDFLFHMYFLVRYCRLLEEGTFRG
RTADFIFMILFGATMITCIAPFIRPSIPFLGSSLTFMMVYVWGRQNEHVR
LTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIIVGHTYYFLEFVFP
VVAEARGWPVRRLFHTPAMLHYFCGTYHHEEAPGAVRVDFAPAHANAAAP
PPPPAAAGAGAGAGGGGAGGGQHLHED*

Synonyms

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