NO05G02810, NO05G02810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_001420687.1 (DMT family transporter: drug/metabolite [Ostreococcus lucimarinus CCE9901] >ABO98980.1 DMT family transporter: drug/metabolite [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 101.3 bits (251), Expect = 1.200e-17 Identity = 87/272 (31.99%), Postives = 130/272 (47.79%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKE-GSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGAIVIAFAGVVSGSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERL------GLPSDIMGLPLNVSGLFAVVFSKMRLEGP 267 +R++LALPFL A KE GSLP R A +++ +G + + LVF A+ +GP VA + P PV+ A+ + + LER+TRVK GV + AG + L +I T G I +++ QT YA +V L V+ + + + D + VP SAW AV+ G+ S FAH+ SWAVA P++++ + FT L+ VFL ERL G+ I+G+ L +A R + P Sbjct: 67 LRLALALPFLAISARKEGGSLPW--RAVATWVVPMGAM-IGAAYLLVFVANARSGPTLVACVQPIMPVSVAVMSYVIGLERMTRVKALGVIVVFAGTVTALRAYEIFQTGGMNF---LDIFLLLSQTNSYAVYVVMLXXXXXXXXXXXXXXXXXXXXXXFVVLLIAIPAFA-RLDVSRVPASAWGAVVFAGWGSSVFAHSLNSWAVARVKGVLPTVYSGVQVIFTIVLSRVFLRERLPWDRGVGIAVTILGVCLVARAKYAETPDATRRDAP 331
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_003064289.1 (Drug/Metabolite transporter superfamily [Micromonas pusilla CCMP1545] >EEH51911.1 Drug/Metabolite transporter superfamily [Micromonas pusilla CCMP1545]) HSP 1 Score: 87.4 bits (215), Expect = 1.800e-13 Identity = 76/280 (27.14%), Postives = 125/280 (44.64%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVIL--WPDKIALTNGRPDEIPAGICVIVIQT--MWYAALLVALKIKLQ------------------------------------------THPNPFGLYAYASLTGAIVIAFAGVVSGSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEE 236 +R++LALPFL+++A +EG A + + +G A LVF ++ +GPN A++ P P+ AA ++AL++ER+ +K GG+ ++V G + L W ++ DE P + I + T + YA +V L + L+ P A++ IVIA GV + + +P A+ AVL G S FAH SWA++H S P++++ + FT LA +FL+E Sbjct: 70 LRLALALPFLYWLARREGGRALRGWERAWPLPMGAAIGTA--YALVFVCNQRSGPNYTAMVQPLIPLAAAAMSAALRIERVDAMKAGGLFVSVVGTTITLRVWTNE--------DEAPGVVDSIFLMTQPIAYATYVVLLALALKRVRAGDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPMLFLFAATVVSEIVIASVGVRGLVRRVEWSTLPAHAYLAVLYAGIMSSCFAHGINSWAISHVSGVLPTVYSGVQVIFTVILADIFLDE 339
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_002502713.1 (Drug/Metabolite transporter superfamily [Micromonas commoda] >ACO63971.1 Drug/Metabolite transporter superfamily [Micromonas commoda]) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-13 Identity = 75/262 (28.63%), Postives = 121/262 (46.18%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKEGSLPKIDRRNARYMLLLGL----LGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKL----------------------QTHPNPFGLYAYASLTGAIVIAFAGVVSGSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERL 238 +R+ LALPFL+++A KEGS R R LL + + + + +F ++ +GP A A++ P P++ F + L LE L KV G+ +A G + L ++ TN P P + ++VIQ Y +V L L + P P A+L + IA G+ + +P +A+ AVL G A S FAH SWAV+H S P++++ + +T L++V L E++ Sbjct: 56 LRLVLALPFLWWLALKEGS------RRFRSAELLYIPPMAFAIGIAYSFIFVCNQRSGPIATAMVQPLMPISTGAFLAVLGLEPLPPFKVFGMLVATFGTSLAL---RVYSTNIGPG--PLDVFLLVIQASSYGVYIVLLTRALGQIRTAHEIETRALKEASSEQEKPPPGPMLFLFSATLLAEVAIACVGLPGLVTAVNWQDLPVAAYMAVLYAGIASSCFAHGLNSWAVSHVSGVLPTVYSGVQVIWTALLSYVVLGEKI 306
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_003283505.1 (hypothetical protein DICPUDRAFT_147163 [Dictyostelium purpureum] >EGC40002.1 hypothetical protein DICPUDRAFT_147163 [Dictyostelium purpureum]) HSP 1 Score: 82.8 bits (203), Expect = 4.400e-12 Identity = 76/299 (25.42%), Postives = 139/299 (46.49%), Query Frame = 0 Query: 2 MRVSLALPFLF---FVAWKEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGA-IVIAFAGVVSGSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGLPSDIMGLPLNVSGLFAVVFSKMRLEGPMSAIATASDKDTVNEIGMDAVLPDTVAPPA 297 +R+++A P L+ F+ + L +++ ++ L G+L V + Q+L L+ + AI PA PV + +F L ER T++K G++ AV G ++++ + N +I G + T+ YA L+ K + + A++ G+ VI F + + +I + W A+L C + + SWAVA ++A S++ C+ P TG LA +FL + + +I G + V G+ V+ SK R + +K ++ AV +T++P A Sbjct: 56 LRLAIATPILWICAFIVDTKEMLKLPNKKELLFLSLSGILSVTVNQSLFLLGLSLSTASNAAITQPAIPVFSTVFGVLLGFERKTKLKFLGIATAVIGCVLMVDFTHLTSENSSSRDILLGNLCFLGNTVAYAVFLMVQKPLGDRGISAIKIMAWSFGIGSPPVILFGLLYTDNISHAVASITVWPWMAILYCAILATAYCFFASSWAVAKSNAVTVSVYLCVEPLATGILATIFLPDEILTLLNIFGGIVMVCGVALVMVSKYREKKKDELDNFEKEKLKRYDMNNSAVELNTLSPEA 354
BLAST of NO05G02810 vs. NCBI_GenBank
Match: EWM28161.1 (hypothetical protein Naga_100004g177 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 4.800e-11 Identity = 55/171 (32.16%), Postives = 77/171 (45.03%), Query Frame = 0 Query: 310 DPAEYLATKRLGSLKWLVEP-ASSSVPPPKPVSLSPDLPVHRCVCCETQAGIFEQHVAQFLTSKEFATFSTVIRRPL--VLSKRGEVRCLDGPLVPPFGLNICANDGPRTAKDCHHHPRVGYVQQPLRTEGDDHVLYWLDVGKPQRI--LEAGGARGEGAXXXXXXXXRIS 476 DP EYLA LGSLKWL+EP S S P + S +C CC Q I ++A FL S+E + + + V + G C G L P F + P YV +PLR + D H Y+LD+ +P+R+ + AG + GE + R+S Sbjct: 5 DPIEYLANCHLGSLKWLLEPNRSRSAPRHSQPTPSRHCLAGQCTCCAMQVCIL-GNIANFLNSQELSVLACASAQLARGVYRREGVTLCNKGFLFPAFKSIEDIDGNPSKEASSRGKMYAKYVPRPLRNQSDGHSWYYLDLARPERVAQVNAGASMGEKSSMDQGRAERMS 174
BLAST of NO05G02810 vs. NCBI_GenBank
Match: WP_006932079.1 (EamA/RhaT family transporter [Labrenzia aggregata] >EAV45654.1 hypothetical protein SIAM614_23582 [Stappia aggregata IAM 12614]) HSP 1 Score: 78.6 bits (192), Expect = 8.300e-11 Identity = 72/256 (28.12%), Postives = 121/256 (47.27%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASAL-KLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGA--IVIAFAGVVSGS-IYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGLPSDIMGLPLNVSGL 254 +RVS+A L + W G L +++R++A L++GLL A+P +L+F G +I+ PV + AS L K E L ++ GV L VAG ++LW L + D + A +C + + A A + K P + A L G+ +++ A + +G+ DP++ +AWF VL G + A+ +A A+ SL L P+ F + L E LG+ + + G + ++GL Sbjct: 31 LRVSIACAVLLIILWHRGMLNRLERQHALPFLVMGLLNNAVPFSLLFLGQTAIGAGLASILNATTPVFTVVVASLLTKQETLQGNRIAGVVLGVAGVAIMLWSSLSGLAS---DPLWAQLCCLGAAISYACAATFARRFK----SLPPQVSATGQLIGSSTLMLPVALLTAGNWSIADPSL---TAWFNVLALGVLATALAYLIYFQILAEAGATNASLVTLLVPASALFFGWLILGENLGV-TQLGGFAVLLAGL 275
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_012758053.1 (hypothetical protein SAMD00019534_020080 [Acytostelium subglobosum LB1] >GAM18833.1 hypothetical protein SAMD00019534_020080 [Acytostelium subglobosum LB1]) HSP 1 Score: 75.9 bits (185), Expect = 5.400e-10 Identity = 79/303 (26.07%), Postives = 138/303 (45.54%), Query Frame = 0 Query: 3 RVSLALP--FLFFVAWKEGSLPKIDRRNARYML--LLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPD-----EIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGAIVIAFAGVVSGSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGLPSDIMGLPLNVSGLFAVVFSKMRLEGPMSAIATASDKDTVNEIGMDAVLPDTVAPPA 297 R+ LA P +LF V + + K+ ++L L+G+ V + Q+L E +L+ + AI PA P+ + + A A K ER + +K G+ ++VAGA+++ + LT+ R D I G + TM YA L+ + L P + ++A L G I + + Y D W A+L + + SWAV + ++ +++ C+ P T A +FL ERL + +I+G + G+ V+ +K R KD +++ D +L ++ A A Sbjct: 57 RLLLATPILWLFAVITEPQQMRKLPSSPREWLLLVLVGIFAVTINQSLFLEGLELSTASNAAITQPAIPIFSTLLAVAFKYERKSWLKFVGIGVSVAGAILM-----VDLTHLRDDSRSSLNILFGNLCFLGNTMAYAGFLLLQRPLLALGNPPAKIMSWAFLFGTIPVIALTLGITRDYSDFLETRYVNWLAILYTAIFATAYTFWASSWAVKKSDSTTVAMYLCVEPLVTSIAAAIFLHERLTI-LNILGAITVLVGVAVVMVAKHR----------EYKKDIMDQYTKDKLLTESTATGA 343
BLAST of NO05G02810 vs. NCBI_GenBank
Match: XP_004341083.1 (integral membrane protein duf6 domain containing protein [Acanthamoeba castellanii str. Neff] >ELR19019.1 integral membrane protein duf6 domain containing protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 72.4 bits (176), Expect = 5.900e-9 Identity = 66/263 (25.10%), Postives = 119/263 (45.25%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAW---KEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASALKLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGAIVIAFAGVVS--GSIYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGLPSDIMGLPLNVSGLFAVVFS 260 +R+ A P F +A+ +E ++ ++ LG++G+ Q L L +++PA V + ++ L LE+L+ K+GG+S+ V GAL+IL + L +I G + + T+ + +L + L+ L P L + G +VI +V + P +A+ + + F ++ +WA+ +AS +LF CL A V L E+L + + GL L ++GLF V +S Sbjct: 72 LRLIFATPAFFALAYVRERESLFSSRSLKDWLWLGGLGMMGMVFNQLLFLSGLSLTTATNAGMVSPAISVFSTAISALLCLEKLSLWKLGGISITVVGALIILEVENFELFGS--SDILLGNLLAISSTVCF-SLFIVLQKPLTARVTPTVLNFFVFAVGLVVIVPITLVGFWDEVVDVARTAPLNAYLSTIYSAFVAGVIGYSLNTWAIHQIAASTVALFYCLQALMIALFAWVLLGEQLTVRVAVGGL-LIMAGLFTVTWS 330
BLAST of NO05G02810 vs. NCBI_GenBank
Match: CTQ47156.1 (putative inner membrane transporter yiJE [Labrenzia aggregata]) HSP 1 Score: 72.4 bits (176), Expect = 5.900e-9 Identity = 68/242 (28.10%), Postives = 110/242 (45.45%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASAL-KLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGA--IVIAFAGVVSGS-IYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGL 240 +RVS+A L + W G L +++++ A L++GLL A+P +L+F G +I+ PV I A L K E L ++ GV L VAG ++LW L + D + A +C + + A A + K P + A L G+ +++ A + +GS DP++ +AW VL G + A+ +A A+ SL L P+ F + L E LG+ Sbjct: 38 LRVSIACTVLLMILWHRGMLNRLEKKYAVPFLVMGLLNNAIPFSLLFLGQTEIGAGLASILNATTPVFTVIVAGLLTKQETLQGNRIAGVVLGVAGVAIMLWSSLSGLAS---DPLWAQLCCLGAAISYACAATFARRFKTL----PPQVTATGQLLGSTTLMLPVALLTAGSWTMADPSL---TAWLNVLALGVLATALAYLIYFQILAEAGATNASLVTLLVPASALFFGWLILGENLGV 269
BLAST of NO05G02810 vs. NCBI_GenBank
Match: AMN51876.1 (ABC transporter permease [Labrenzia sp. CP4]) HSP 1 Score: 72.4 bits (176), Expect = 5.900e-9 Identity = 68/242 (28.10%), Postives = 110/242 (45.45%), Query Frame = 0 Query: 2 MRVSLALPFLFFVAWKEGSLPKIDRRNARYMLLLGLLGVALPQTLVFEADKLAGPNAVAIMTPAAPVNAAIFASAL-KLERLTRVKVGGVSLAVAGALVILWPDKIALTNGRPDEIPAGICVIVIQTMWYAALLVALKIKLQTHPNPFGLYAYASLTGA--IVIAFAGVVSGS-IYFDPNIVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGFLAHVFLEERLGL 240 +RVS+A L + W G L +++++ A L++GLL A+P +L+F G +I+ PV I A L K E L ++ GV L VAG ++LW L + D + A +C + + A A + K P + A L G+ +++ A + +GS DP++ +AW VL G + A+ +A A+ SL L P+ F + L E LG+ Sbjct: 38 LRVSIACTVLLMILWHHGMLNRLEKKYAVPFLVMGLLNNAIPFSLLFLGQTEIGAGLASILNATTPVFTVIVAGLLTKQETLQGNRIAGVVLGVAGVAIMLWSSLSGLAS---DPLWAQLCCLGAAISYACAATFARRFKTL----PPQVTATGQLLGSTTLMLPVALLTAGSWTMADPSL---TAWLNVLALGVLATALAYLIYFQILAEAGATNASLVTLLVPASALFFGWLILGENLGV 269 The following BLAST results are available for this feature:
BLAST of NO05G02810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02810 ID=NO05G02810|Name=NO05G02810|organism=Nannochloropsis oceanica|type=gene|length=2772bpback to top protein sequence of NO05G02810.1 >NO05G02810.1-protein ID=NO05G02810.1-protein|Name=NO05G02810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bpback to top Synonyms
Publications
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