NO05G02800, NO05G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02800 vs. NCBI_GenBank
Match: EWM28237.1 (hypothetical protein Naga_100004g178 [Nannochloropsis gaditana]) HSP 1 Score: 307.4 bits (786), Expect = 4.200e-80 Identity = 163/254 (64.17%), Postives = 190/254 (74.80%), Query Frame = 0 Query: 1 MRRGRLLLLACITTALVSLSVTNAFVLKPLGSSTNYRSSFCFPTKPHRSNGASSS-LLPQHLTVGGEDPSGLDLQSVWNTATGVGALVVGALVLADIVDTWPRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASRYTWTLANTDILDPTLSNGQLPEELLFYGGLLRKSTLLALVNEPRAGYDLNVVAVVSDRDVAYVAERNIYKGEELMTDYGPMYNRRHYR 254 MRR LL + C V++S AFVL P ++ ++ C T P R SSS L + LTVGGEDP + LQS W T VGALVVGALVLA++V WPRG VN +LVEA STLGPQAGRGLFA NIP+DT IG FPGV+S R +W+ KDSEEAA+ A RYTW+LA D+LDPTLSNG+LP+ L+F+GGLLR TLLALVNEPRAG DLNVVAVVS+RDVAYVAER+I+ GEELMTDYGP Y+RRHYR Sbjct: 1 MRRHELLYVLC----TVAVSTIQAFVLTPSALRSSIVNTPCRTTAPSRFVTTSSSPWLVRQLTVGGEDPGAVTLQSTWQLVTNVGALVVGALVLAEVVQDWPRGWVNRQLVEAGPSTLGPQAGRGLFAARNIPRDTVIGNFPGVVSSRASWLGRKDSEEAALLARRYTWSLATGDVLDPTLSNGELPDTLIFFGGLLRIPTLLALVNEPRAGMDLNVVAVVSERDVAYVAERDIFAGEELMTDYGPAYDRRHYR 250
BLAST of NO05G02800 vs. NCBI_GenBank
Match: GAX28667.1 (hypothetical protein FisN_33Hh059 [Fistulifera solaris]) HSP 1 Score: 81.6 bits (200), Expect = 3.800e-12 Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 0 Query: 77 WNTATGVGALVVGALVLADIVDTWPRGSV--NTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVR---ASRYTWTLA-NTDILDPTLSNGQL------PEELLFYGGLLRKSTLLALVNEPRAGYDLNVVA--VVSDRDVAYVAERNIYKGEELMTDYGPMYNRRHYR 254 W+ G G +LV I+D PRG++ L+E S + AG GLF +++ T +G +PG++ ++ + ++ A++ Y W + N+ ++DPT S G L P +G +T L +NEP G D+NVV V+S+R V ERN+ GEEL DYGP Y+R YR Sbjct: 59 WSLRLGTGLFTYASLVA--ILDR-PRGTLLAPETLLEVRPSAV---AGLGLFVTQDLGAGTVLGTYPGIVVA----MNDRRVQQKAIQYPECQTYIWRFSDNSALIDPTNSVGTLDNFCSSPTAPFLFG----VATTLCRINEPPKGKDVNVVTEEVLSERKVVLRLERNVVAGEELFMDYGPQYDRSAYR 235
BLAST of NO05G02800 vs. NCBI_GenBank
Match: GAX73149.1 (hypothetical protein CEUSTIGMA_g602.t1 [Chlamydomonas eustigma]) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-11 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 0 Query: 81 TGVGALVVGALVLADIVDTW---PRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASR------YTWTLANTDILDPTLSNGQLPEELLFYGGLLRKSTLLAL--VNEPRAGYDLNVVAV----VSDRDVAYVAERNIYKGEELMTDYGPMYNRRHY 253 + V + AL++A I++ + PRG LV+ A S + AG+GLFA +IP T +G +PG+ +DS + ++A R Y +T + LDPT ++G+ P G + T +AL VNEP G ++ DR++ +V R+I +GEE++ DYG YNR Y Sbjct: 38 SSVSLCMSAALLVAIIIEVYKNRPRGWARNDLVQIATSQV---AGKGLFAKRDIPSSTVLGAYPGL---------PRDSYDMGLKAHRCPQVEQYVFTTGSGVYLDPTDASGEAPSPYPSPGLMWPFPTQIALAFVNEPPEGSCGPNCSIEDGGQDDREILFVTSRDIAEGEEILIDYGQFYNRNGY 212
BLAST of NO05G02800 vs. NCBI_GenBank
Match: GAX23165.1 (hypothetical protein FisN_33Lh059 [Fistulifera solaris]) HSP 1 Score: 78.2 bits (191), Expect = 4.200e-11 Identity = 63/185 (34.05%), Postives = 92/185 (49.73%), Query Frame = 0 Query: 77 WNTATGVGALVVGALVLADIVDTWPRGSV--NTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPG-VISRRKNWVSTKDSEEAAVRASRYTWTLA-NTDILDPTLSNGQLPEELLFYGG--LLRKSTLLALVNEPRAGYDLNVVA--VVSDRDVAYVAERNIYKGEELMTDYGPMYNRRHYR 254 W+ G G +LV ++D PRG++ L+E S + AG GLF +++ T +G +PG VIS V K ++ Y W + N+ ++DPT G L + L R +T L +NEP G D+NVV V+++R V ER++ GEEL DYGP Y+R YR Sbjct: 4 WSLRLGTGLFTYASLVA--LLDR-PRGTLLAPESLLEVRPSAV---AGLGLFVTQDLRAGTVLGTYPGLVISLNDPRVQQKANQYP--ECQTYIWRFSDNSALIDPTNGVGTLDDFCRSPTAPFLFRVATTLCRINEPPKGKDVNVVTDEVLNERIVVLRLERDVVAGEELFMDYGPQYDRSAYR 180
BLAST of NO05G02800 vs. NCBI_GenBank
Match: XP_002184309.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44058.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.0 bits (188), Expect = 9.300e-11 Identity = 60/188 (31.91%), Postives = 90/188 (47.87%), Query Frame = 0 Query: 82 GVGALVVGALVLADIVDTWPRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVI-SRRKNWVSTKDSEEAAVRASRYTWTLA-NTDILDPTLS-----------NGQLPEELLFYGGLLRKS--TLLALVNEPRAGYDLNVVA--VVSDRDVAYVAERNIYKGEELMTDYGPMYNRRHY 253 G+ A+ ++A + R V ++ V+ QST+ P AG GLFA ++ + T +G +PGV+ +N +D Y W + N ++DPT + N +P L + LL S T L +NEP G D+NVV + R V + ER++ KGEEL DYG Y+R Y Sbjct: 102 GISAMASYVGIVAYVDRPRGRVGVGSREVDVRQSTV-PGAGLGLFAATDLERGTVLGTYPGVVLPLSQNLPKLRDFP----ACEGYIWRFSDNKFVIDPTNAVGTLESDCVGGNPSMPGSLWLFTNLLEMSTPTTLCRINEPPIGLDVNVVTNEDLQGRTVTFALERDVAKGEELFIDYGLYYDRSLY 284
BLAST of NO05G02800 vs. NCBI_GenBank
Match: OEU09837.1 (hypothetical protein FRACYDRAFT_194758 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.3 bits (181), Expect = 6.000e-10 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0 Query: 117 LGPQ--AGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASRYTWTLA-NTDILDPT-LSNGQL--------PEEL---LFYGGLLRK------STLLALVNEPRAGYDLNVVAV--VSDRDVAYVAERNIYKGEELMTDYGPMYNRRHYR 254 +GP AG GLF +++PK T +G +PGV+ + + + + Y W N I+DPT G+L P +L L + +L ST L +NEP GYD+NV+ + +R V + ER++ GEEL DYG Y+R Y+ Sbjct: 106 VGPSKTAGLGLFVTQSLPKGTILGSYPGVVIPLQQHSESNKVKTLFPECTEYIWRFTDNQYIIDPTNHQTGELDDYCAGGNPSQLFSCLLFNNILPPLSIYSCSTALCRINEPSKGYDVNVITEEDLINRKVIFTLERDVIAGEELYIDYGLTYDRTKYQ 265
BLAST of NO05G02800 vs. NCBI_GenBank
Match: XP_002286452.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96093.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 73.2 bits (178), Expect = 1.300e-9 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 0 Query: 101 PRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASRYTWTLA-NTDILDPTLSNGQLPE------------ELLF--YGGLLRKSTLLALVNEPRAGYDLNVVAVVSD---RDVAYVAERNIYKGEELMTDYGPMYNRRHY 253 PRG+++ Q + P AG GLFA E++PK T +G +PGV+ ++ K + A + Y+W L N+ ++DPT G++ + ++F + L+ T L +NEP GY V D ++V + R++ GEEL DYG Y+R Y Sbjct: 109 PRGNLSIPNSLLIQQSRVPNAGLGLFATESLPKGTILGTYPGVLRPASSFYDGKGFQFPA--SVGYSWRLTDNSYVIDPTDEQGEIQDYCVGGSWEVPLSNVIFKTFLKFLKVPTALTRINEPPIGYGGCNVEAREDLVKKEVVFRLCRDVTAGEELFLDYGFYYDRSQY 276
BLAST of NO05G02800 vs. NCBI_GenBank
Match: XP_005767042.1 (hypothetical protein EMIHUDRAFT_96318 [Emiliania huxleyi CCMP1516] >EOD14613.1 hypothetical protein EMIHUDRAFT_96318 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.4 bits (176), Expect = 2.300e-9 Identity = 59/205 (28.78%), Postives = 82/205 (40.00%), Query Frame = 0 Query: 91 LVLADIVDTWPRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASRYTWTLANTDILDPTLSNGQLPE-----------------------------------------ELLFYGGLLR--KSTLLALVNEPRAGYDLNVVAVVSDRDVAYVAERNIYKGEELMTDYGPMYNRRHY 253 L+ A + + PRG + L+E S L AGRG FA +P T +G +PG + + + + Y W + + LDPT G+L E E L G + T LAL+NEP G D+NV V DV + AER++ +GEEL DYG Y+R Y Sbjct: 37 LLAAQLRERRPRGWLAPGLLEVRPS-LVAGAGRGCFAATALPSGTVLGAYPGRLRSAAEYAT--KLRVVGPHVAEYCWRIGDVAALDPTDGEGRLYEARGTLTHQGSPLLSAPSAQHSMDALSVRWQAPGVPLIEGMPESLRTGAMANWCTPTTLALLNEPGPGGDVNVGVAVEGADVVFSAERDVRRGEELYLDYGQDYDRSGY 238
BLAST of NO05G02800 vs. NCBI_GenBank
Match: PNW77585.1 (hypothetical protein CHLRE_10g443100v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 69.3 bits (168), Expect = 1.900e-8 Identity = 56/159 (35.22%), Postives = 75/159 (47.17%), Query Frame = 0 Query: 101 PRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNWVSTKDSEEAAVRASRYTWTLANTDILDPTLSNGQ---LPEELLFYGGLLRKSTLLALVNEPRAGYDLNVVAVVSD----RDVAYVAERNIYKGEELMTDYGPMYNRRHY 253 PRG L+E S + AG+GLFA +IP T +G +PG R ++ E A AS Y + + LDPT + GQ P LF+ L L NEP G L A V D D+ +VA R+I G E++ DYG Y+R +Y Sbjct: 269 PRGWSRKDLLEVRASAI---AGKGLFATASIPSGTVLGAYPG---RLRSGAEMLAKCEYAPMASSYAFRTGDGSFLDPTDTTGQPSPYPTPGLFWP--LPSDVSLCFANEPPKG-SLGTNASVEDGSAAGDLHFVACRDIPAGAEILIDYGISYDRSNY 418 The following BLAST results are available for this feature:
BLAST of NO05G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02800 ID=NO05G02800|Name=NO05G02800|organism=Nannochloropsis oceanica|type=gene|length=894bpback to top protein sequence of NO05G02800.1 >NO05G02800.1-protein ID=NO05G02800.1-protein|Name=NO05G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
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