NO05G02750, NO05G02750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02750 vs. NCBI_GenBank
Match: EWM28133.1 (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 319.3 bits (817), Expect = 1.100e-83 Identity = 161/242 (66.53%), Postives = 195/242 (80.58%), Query Frame = 0 Query: 21 AFTAATAAGKGRDSTKSEAREHKKEALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVSQEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPILLSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 +++AAT+A R T+ E + +K LAL+GCGKMG AMG N ++AGYPL V+DK+N E T +L AEGA V D R LG+QA+ IVTMLPNDEVL VSQ+ +P+L PGALHI CSTV+P TSR LA H A+ V +VGAPVFARP+G E++QA+FV+GGTD RA++ A+P+LL+TGS VFEF DAGAG+VVKLCGNFLIASAIESIGEALALAENQGL+RVKVM M S TIFDCLIY+G Sbjct: 31 SYSAATSAPMARTRTRLEVSKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVSQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272
BLAST of NO05G02750 vs. NCBI_GenBank
Match: KOO23484.1 (3-hydroxyisobutyrate dehydrogenase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 196.4 bits (498), Expect = 1.100e-46 Identity = 108/220 (49.09%), Postives = 143/220 (65.00%), Query Frame = 0 Query: 47 LALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS----QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPILLSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 +AL+G G MG+ M N + AGY + V+D NA A + A+GA E A +VTM+PND VL V+ L ++ PG++H+ CSTV P TSR LA H G +FVGAP+FAR DG +R A F VGG ++ AI ARP+L + + +FEFG +D GAG+VVK+CGN++IAS I++ EAL+LAE GLDR VM+M + TIFDCLIY G Sbjct: 15 VALIGLGAMGLPMLDNFIAAGYKMRVYDV-NASAMKEAAAKGADGAASPAEAAAGADAVVTMVPNDSVLRKVTCAPETGILHAMRPGSVHVSCSTVHPDTSRELARLHATAGSAFVGAPIFARADGVARRLASFCVGG-EAGAIAMARPLLEANANGIFEFG-DDPGAGNVVKICGNYMIASTIQTCAEALSLAEKSGLDRQAVMRMLNTTIFDCLIYRG 231
BLAST of NO05G02750 vs. NCBI_GenBank
Match: OLP91220.1 (putative oxidoreductase YfjR [Symbiodinium microadriaticum]) HSP 1 Score: 185.3 bits (469), Expect = 2.500e-43 Identity = 109/220 (49.55%), Postives = 135/220 (61.36%), Query Frame = 0 Query: 46 ALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVSQEFLPSLLPGA---LHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPILLSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 AL VG GK+G M NL +AG L + DK +A A A + E A T E+ A + + LP+D VL VS E LP+L +H+ CSTVSP SR+L+ + AR V FV APVFARPDG + +A F V G D A P+L T V +FG EDAGA +VVKL GNFLIA+AIES+ EA ALAE +DR K M + S+TIFDCLIY+G Sbjct: 22 ALGFVGLGKIGSGMVTNLTKAGESLIIFDKSHAAAEA-VAGEAVRAATSVAEVAQNAEVVFSALPDDNVLQAVSSELLPALAARGGRPIHVSCSTVSPSISRSLSEAYEARAVGFVSAPVFARPDGMRRGEATFPVSGPD-WAKSRVVPLLQKTALGVHDFG-EDAGAANVVKLGGNFLIAAAIESMAEASALAEGYDVDREKFMSLMSSTIFDCLIYKG 238
BLAST of NO05G02750 vs. NCBI_GenBank
Match: ETO67359.1 (hypothetical protein F444_15716 [Phytophthora parasitica P1976]) HSP 1 Score: 182.2 bits (461), Expect = 2.100e-42 Identity = 98/226 (43.36%), Postives = 137/226 (60.62%), Query Frame = 0 Query: 46 ALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS--------QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 A+ +G G MG M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V+ L ++ PGALH+GCST+ P TSR+L + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T QV F ED+GA + VKL GNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 25 AVGFIGLGNMGFPMAHNLLKAGVDVLCFDTNRANID-RLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGQVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 249
BLAST of NO05G02750 vs. NCBI_GenBank
Match: ETI38588.1 (hypothetical protein F443_15738 [Phytophthora parasitica P1569] >ETP08495.1 hypothetical protein F441_15558 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 180.6 bits (457), Expect = 6.100e-42 Identity = 97/226 (42.92%), Postives = 137/226 (60.62%), Query Frame = 0 Query: 46 ALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS--------QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 A+ +G G MG M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V+ L ++ PGALH+GCST+ P TSR+L + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T +V F ED+GA + VKL GNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 24 AVGFIGLGNMGFPMAHNLLKAGVDVLCFDTNRANID-RLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 248
BLAST of NO05G02750 vs. NCBI_GenBank
Match: ETK78791.1 (hypothetical protein L915_15280 [Phytophthora parasitica] >ETL32221.1 hypothetical protein L916_15172 [Phytophthora parasitica] >ETL85478.1 hypothetical protein L917_15001 [Phytophthora parasitica] >ETM38622.1 hypothetical protein L914_15135 [Phytophthora parasitica]) HSP 1 Score: 180.6 bits (457), Expect = 6.100e-42 Identity = 97/226 (42.92%), Postives = 137/226 (60.62%), Query Frame = 0 Query: 46 ALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS--------QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 A+ +G G MG M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V+ L ++ PGALH+GCST+ P TSR+L + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T +V F ED+GA + VKL GNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 25 AVGFIGLGNMGFPMAHNLLKAGVDVLCFDTNRANID-RLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 249
BLAST of NO05G02750 vs. NCBI_GenBank
Match: XP_008895296.1 (hypothetical protein PPTG_04760 [Phytophthora parasitica INRA-310] >ETN19445.1 hypothetical protein PPTG_04760 [Phytophthora parasitica INRA-310]) HSP 1 Score: 180.6 bits (457), Expect = 6.100e-42 Identity = 97/226 (42.92%), Postives = 137/226 (60.62%), Query Frame = 0 Query: 46 ALALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS--------QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 A+ +G G MG M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V+ L ++ PGALH+GCST+ P TSR+L + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T +V F ED+GA + VKL GNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 24 AVGFIGLGNMGFPMAHNLLKAGVDVLCFDTNRANID-RLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 248
BLAST of NO05G02750 vs. NCBI_GenBank
Match: POM62812.1 (MRNA surveillance protein pelota [Phytophthora palmivora var. palmivora]) HSP 1 Score: 173.7 bits (439), Expect = 7.500e-40 Identity = 97/225 (43.11%), Postives = 133/225 (59.11%), Query Frame = 0 Query: 47 LALVGCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTV--------SQEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 + +G G MG M N+++AG + D N+ +LV GA T ++ TQ TI ++LPNDEV+ V L ++ P ALHIGCST+ P TSR+L H +V AP+FARPDG QA FVV G+D+ AI+ A L T +V F +D GA + VKLCGNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 12 VGFIGLGNMGFPMAHNILKAGTGVLCFDA-NSSNVDRLVLLGAKPATSVEQVATQTNTIFSVLPNDEVVTKVVLGYESKSGSGLLANMAPDALHIGCSTIHPNTSRSLDAKHHEANTKYVAAPIFARPDGMAAMQANFVVSGSDATAIKLASQWLHKCTNGRVAPFSTDDPGAANAVKLCGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 235
BLAST of NO05G02750 vs. NCBI_GenBank
Match: XP_002905448.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68289.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 172.9 bits (437), Expect = 1.300e-39 Identity = 96/217 (44.24%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 55 MGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTV--------SQEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 MG M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V L S+ PGALH+GCST+ P TSRTL + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T +V F +ED GA + VKL GNFLIASAIES+ EAL L E G+DRV+ M+ +S+T +I++G Sbjct: 1 MGFPMAHNLLKAGVDVLCFDANRANVD-RLVLLGAKPAASVEEVAAQTSTIFSVLPRDEIVTSVVIGNETKHGSGLLASMAPGALHVGCSTIHPNTSRTLDIKHLEAKTKYVAAPIFARPDGMEAMQANFVVSGSDASAVEQASQWLHKCTNGRVASFSSEDPGAANAVKLSGNFLIASAIESMAEALTLLEANGVDRVQAMEFYSSTFLKSVIHKG 216
BLAST of NO05G02750 vs. NCBI_GenBank
Match: KUF80266.1 (putative oxidoreductase YfjR [Phytophthora nicotianae]) HSP 1 Score: 169.5 bits (428), Expect = 1.400e-38 Identity = 92/213 (43.19%), Postives = 130/213 (61.03%), Query Frame = 0 Query: 59 MGRNLMRAGYPLFVHDKHNAEATAKLVAEGAMAVTDARELGTQARTIVTMLPNDEVLHTVS--------QEFLPSLLPGALHIGCSTVSPFTSRTLALTHTARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPIL-LSTGSQVFEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMFSATIFDCLIYEG 263 M NL++AG + D + A +LV GA E+ Q TI ++LP DE++ +V+ L ++ PGALH+GCST+ P TSR+L + H +V AP+FARPDG E QA FVV G+D+ A+E+A L T +V F ED+GA + VKL GNFLIASAIES+ EAL+L E G+DRV+ M+ +S+T + +I++G Sbjct: 1 MAHNLLKAGVDVLCFDTNRANID-RLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 212 The following BLAST results are available for this feature:
BLAST of NO05G02750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02750 ID=NO05G02750|Name=NO05G02750|organism=Nannochloropsis oceanica|type=gene|length=1516bpback to top protein sequence of NO05G02750.2 >NO05G02750.2-protein ID=NO05G02750.2-protein|Name=NO05G02750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top protein sequence of NO05G02750.1 >NO05G02750.1-protein ID=NO05G02750.1-protein|Name=NO05G02750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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