NO05G02700, NO05G02700 (gene) Nannochloropsis oceanica

Overview
NameNO05G02700
Unique NameNO05G02700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3507
Alignment locationchr5:711789..715295 +

Link to JBrowse

Properties
Property NameValue
DescriptionFoie gras liver health family 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:711789..715295 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022233TRAPP_II_complex_TRAPPC10
IPR021773Foie-gras_1
Homology
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BLAST of NO05G02700 vs. NCBI_GenBank
Match: EWM28119.1 (Foie gras liver health family 1 [Nannochloropsis gaditana])

HSP 1 Score: 958.4 bits (2476), Expect = 2.100e-275
Identity = 608/1179 (51.57%), Postives = 724/1179 (61.41%), Query Frame = 0 
Query:    1 MIILEPGLMARNLAELLDFIRMRFWDLGLSLLGLQKFDEKSIVCAARRNASTKYTAGLGXXXXXXXXXXXXXXXXXXXXXXXVLTSLSDIDAYLRSSPSSSFFPNSGSSSDNDGGKSVDLDDPRRVPLSPVALFARAAPWLPMTLDSVVAFDEQYLRMTEVLVRYLEDGGRERFVGRVQAERASILLRKGEWEEARKVLRRVAEYNLRRDFWVPLLSQVLRNLARCEKERGNAKAYVGTLLQILSLQCLDEATGAYYRSELDEYVRQRMPGSSTSSSSPRLTRPLSLLVTARIKTTPRDLVSIPPSVELGKTASVVVWLHLALQHPLPVDGLTLTLGGVAQLRDQRRLGADYGWIAVSSPANASAAATTGNDIDGGLVLSPPAITPRSPSPRRNIDLAATSNSLGSIDSTSNVSNVSLLYSSSNLPSDMTMTGSAAAASATEEGQQPEDNLVWTLAGPLTLEPGVNELELVTTSLPPPGTYVYEKLILRWGSLILEQDRLAALDPDTLDAAIKQCPPPRRFSALNKTPVRRAVGLTVVVKPPATTLTVLTSPVSPPDSEHVHHLSVLLDTYSDTLTSPMLTLTQPALKAFEVKGPAYLSFYPQKKTDN--EDLGEDAPLHEEEVEVAWNGATATLVLPPILPPSTSLILTVALHPSPDVVDAFVRSRQDHQRLVSVQVQLTAEFNKDNILRRPVDAEREVITAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAVVPNQRRRSLSLTTGTWGHDVREEALCRNTLRTGCEIVIQQPLTVVISVQDCSHWHSSRRYFVQVLLRNRAPLPVILHACRLRPSPFYHIVVQDDEDGDSFSRSGKQGTHLRNLLLAPGQEVRYAYLIERMVSAAAVGSNAAAS--SSSAFRESPSKMSVSADYTLESPRPINKARFRCHHPPQQRQNFERYFQDSAMRSRGDTLRTFVVRAQLVPATLPPSSFLSSRDYGDDVIAAAVTVVDKENQQHLLLPACAPAIPGDVEDRGVVVGYFQNRVTEGVVGVALRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVYEVAADPADWAVWGMTKG--------TVEARSPATGEGSDKQQQTFARVVVECKLVPVRAGLLACPVLTFEPVDVRAAVSPRSRRKSYVRWVGPRDILVVSAPGLKRIPTVRM 1168
            +I+LE GL+ R+LAELLDF R+R WDLG+SLLG  +  E S+V AA R A T   A L                           S       +R         ++G      G     L+ PR V  SP  LF  AAPW+     SV AFD QYLRMTEVLV YLE GGR+RF GRVQAERASIL++ G+WEEAR+++RR+AE N R+D+W+PLLS +LR LA+CEKERGNAKAYVGT+LQI+SL+CLDEAT A Y + L+E+VR  +  ++ S S   L RPLSLLVTARIK  PRDL  +  + EL + ASVV+WLHLA+  PL VDGL LTL    +L + RRLGADY WIA SS         T   +DG      P I   SPSP R  D   + N    + +T N  +VS     S  P D T TG A             + L+W + GP+TLEPGVNEL L   S+PPPG YV+E+L L+WG L+LEQ++L+ALD  TLDA    C P  R  +L K P  RAVGL V  KPP T+L VLTSP+ PPDS   HHLS+L+DT SDTL SP L++TQPALKA +++G A L+ YPQ+   +  E+  +D P  EEEV++AW+G+TATL LP  LP +TSL+LT+ + P P+VV  FVR RQD+QRLVS+ V L AEFNK+  L      E   +                                              RRS S+ TG W  +  ++A+ RN LR   E+VIQQP +V ISVQ CSHW +S R+FVQ LL+NRAPLP  LHAC LR    Y IV  D +          Q   LR+LLLAPGQ+VRYAYLIER      VGS  A S        E PSKMSVSADYT E+ RPIN+AR R HHPPQQ+Q FERYFQDSAM  RGD+LRTFVVRAQLVPA  P     SS + G     A        +Q H LLPACAPA PGDVE+RGVVVG+FQNRV EGVVG ALRLXXXXXXXXXXXXXXXXXX                +L YEVAADPADWAV G TKG         V   SPA    +   ++ F R V ECKLVPVR GLLACP L FEP+ VRAA+SPRS  KS VRWVGPRDILVVS PGL+RIPTVR+
Sbjct:  506 VILLETGLLERHLAELLDFCRVRAWDLGVSLLGSGRLREDSVVYAAHREAMTD-PASLPPMPSTRPEAGATPVSGD--------LSFKSGCQLIRDIAGGD---DTGFQGPGRGSHGSFLEGPRHVVSSPTCLFECAAPWIRSMFSSVSAFDRQYLRMTEVLVLYLEKGGRDRFAGRVQAERASILMQIGDWEEARRLVRRLAEQNYRKDYWLPLLSHLLRQLAQCEKERGNAKAYVGTMLQIVSLRCLDEATEALYLAYLEEFVRNHLTAAAASPSC--LARPLSLLVTARIKAAPRDLAPVTRTPELWQPASVVIWLHLAIARPLIVDGLELTLSETGRLLEDRRLGADYSWIAASS---RPPGTPTPKGLDG------PVIQISSPSPGRKGD---SVNCGKEVWATGN-GDVS---HPSRAPED-TATGLA-------------EYLLWRVPGPVTLEPGVNELTLTAASVPPPGAYVFERLALQWGGLLLEQEQLSALDDYTLDAITTNCTPLCRSPSLVKAPTPRAVGLNVAPKPPVTSLVVLTSPIFPPDSHREHHLSILIDTNSDTLNSPTLSITQPALKALKIEGFAMLALYPQRLNSDGQEEEMDDVPFCEEEVKIAWDGSTATLALPEFLPIATSLVLTLTVRPLPEVVGEFVRGRQDYQRLVSINVVLAAEFNKNGGLSPRRQQENPTVPNPIISPATPFARDKSADFLSQAFSCRTRGGMACV-----------RRSFSIETGAWDRNAMDDAVRRNHLRASAEVVIQQPFSVTISVQACSHWRTSHRFFVQALLKNRAPLPATLHACHLRLPRSYRIVALDQKT--------DQTVLLRDLLLAPGQDVRYAYLIER------VGSTGAGSLPGQPETAEGPSKMSVSADYTWETLRPINQARVRRHHPPQQQQGFERYFQDSAMLCRGDSLRTFVVRAQLVPAASP-----SSAEEGRGTALAQ----GSPHQLH-LLPACAPATPGDVEERGVVVGHFQNRVAEGVVGAALRLXXXXXXXXXXXXXXXXXXVQNRDIEEGTRGKCGFQLTYEVAADPADWAVCGATKGILDIGPGPDVAEASPAEDIDAKHLERHFERTVSECKLVPVRPGLLACPALIFEPLKVRAAISPRSVHKSNVRWVGPRDILVVSPPGLQRIPTVRL 1605
The following BLAST results are available for this feature:
BLAST of NO05G02700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28119.12.100e-27551.57Foie gras liver health family 1 [Nannochloropsis g... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02700.1NO05G02700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02700.1NO05G02700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02700 ID=NO05G02700|Name=NO05G02700|organism=Nannochloropsis oceanica|type=gene|length=3507bp
ATGATTATTTTAGAGCCCGGACTTATGGCGCGGAATTTAGCAGAATTGCT
AGATTTTATTCGAATGCGGTTTTGGGATCTGGGTCTGTCGTTGTTAGGTC
TACAGAAATTTGACGAAAAGTCAATTGTCTGTGCTGCAAGGCGAAATGCA
TCGACGAAGTACACAGCCGGTCTTGGTTCTGCACCGTCACCACGTCGACG
AAGTCCTTTCCCTTCTCCGTCATCTTCCTCTTCCTCCTCGCTTCCTGTCC
TGACCTCTTTAAGCGACATTGATGCCTACCTTCGCTCTTCCCCCTCCTCT
TCCTTCTTCCCCAACAGTGGCAGCAGCAGCGACAACGATGGTGGGAAGTC
CGTAGATTTGGATGACCCTCGCCGCGTACCCTTGTCCCCAGTCGCGCTTT
TTGCCCGGGCCGCTCCCTGGTTGCCGATGACGCTGGACTCTGTCGTGGCT
TTCGACGAGCAATATTTGAGAATGACCGAGGTATTAGTCCGCTACCTGGA
AGACGGCGGTCGAGAGCGGTTCGTGGGCCGTGTCCAGGCGGAGCGGGCGA
GTATCTTGCTACGAAAAGGGGAATGGGAGGAAGCTCGTAAAGTGTTGCGG
CGTGTGGCGGAGTATAATCTGAGAAGGGATTTCTGGGTGCCGTTGCTCTC
CCAAGTCTTGCGAAACTTGGCACGCTGTGAGAAGGAGCGGGGGAATGCGA
AGGCGTATGTCGGGACGCTGTTGCAGATTTTGTCGTTGCAGTGTTTAGAT
GAGGCGACAGGAGCTTACTACAGATCGGAACTTGATGAGTACGTCCGGCA
ACGGATGCCAGGCAGCAGCACCAGCAGCAGCAGTCCTCGTTTGACCCGCC
CTTTAAGTCTGCTGGTTACCGCCCGCATTAAAACTACTCCAAGAGACCTT
GTTTCTATTCCTCCATCAGTGGAGCTGGGCAAGACAGCCTCGGTAGTCGT
CTGGCTGCATTTAGCTCTCCAACACCCCTTACCTGTTGATGGCCTGACAT
TGACTTTGGGGGGGGTGGCGCAACTGCGGGATCAACGACGGCTCGGAGCT
GATTATGGGTGGATAGCAGTGAGCTCGCCCGCAAACGCATCTGCCGCGGC
CACAACCGGAAATGATATAGATGGGGGTTTAGTCCTTTCCCCTCCTGCGA
TAACTCCGCGCAGCCCCAGCCCTCGTCGTAATATAGACCTAGCGGCGACT
AGCAATTCTTTGGGGAGTATCGACAGCACAAGTAATGTGAGCAATGTGTC
TTTGCTGTATTCTTCGTCAAACCTTCCCTCTGACATGACCATGACGGGAA
GCGCAGCTGCTGCTTCAGCGACAGAGGAGGGGCAGCAGCCCGAAGATAAC
CTAGTCTGGACTCTAGCAGGGCCCTTGACCCTCGAGCCGGGTGTAAATGA
GCTAGAGCTCGTCACCACCTCCCTCCCTCCACCCGGCACATATGTCTACG
AGAAGCTTATCCTCCGATGGGGTAGCCTGATCCTGGAACAAGATCGACTC
GCGGCCCTCGACCCCGACACCTTAGATGCAGCGATCAAGCAATGCCCACC
CCCGCGCCGCTTCTCTGCTCTCAACAAAACGCCAGTTCGGCGCGCGGTGG
GTCTAACTGTAGTCGTCAAACCTCCCGCTACGACTCTAACAGTGCTAACC
TCGCCTGTTTCCCCTCCGGATAGCGAACATGTGCATCACCTCTCGGTGCT
TCTGGACACGTACTCTGACACGCTGACATCCCCCATGCTCACCCTCACCC
AACCTGCTCTCAAAGCTTTTGAAGTAAAGGGCCCAGCCTATCTTTCTTTC
TACCCACAGAAAAAGACGGACAACGAAGATCTAGGAGAAGATGCACCACT
CCACGAAGAAGAAGTGGAAGTGGCCTGGAATGGTGCGACAGCAACATTGG
TTCTTCCACCCATCTTGCCCCCAAGCACCTCTCTAATTCTTACTGTCGCC
TTGCACCCGTCACCCGATGTAGTCGACGCCTTTGTTCGAAGCCGGCAAGA
CCATCAACGCCTAGTTTCGGTACAGGTACAGCTCACCGCGGAATTCAACA
AAGACAATATTCTCCGTCGCCCCGTGGACGCTGAGCGAGAAGTAATAACA
GCAGCAGCAGCAGGAGCACTAGCAGTAGCACCAGCAGCTTGCACATCTAC
TGCCTCAGACGCCGTTTCGCCACGCTCCTTCTCTATCTCCTCCTCCTCTT
CCAACACCCCCCGCGCTGTCGTCCCAAATCAAAGACGCCGCAGTCTCTCC
CTTACCACGGGCACGTGGGGCCATGACGTCCGCGAAGAAGCCCTTTGTCG
AAATACCCTCCGAACAGGGTGCGAAATTGTCATCCAACAACCTCTCACTG
TCGTCATCTCCGTGCAAGACTGTTCACACTGGCATTCCTCCCGTCGGTAC
TTCGTGCAAGTCCTACTCCGGAACCGCGCCCCCTTACCTGTAATACTCCA
TGCGTGTCGCCTTCGCCCCTCTCCTTTCTATCACATCGTGGTGCAGGACG
ACGAGGACGGAGATAGTTTCAGCAGAAGCGGCAAGCAAGGGACCCACCTC
CGCAATCTCCTCCTTGCCCCCGGACAAGAGGTGCGTTACGCTTATCTGAT
CGAACGGATGGTTTCTGCCGCAGCAGTAGGAAGTAATGCAGCAGCCTCGT
CGTCATCCGCCTTCCGCGAATCCCCCAGCAAGATGTCCGTTAGCGCAGAC
TACACTTTGGAGAGCCCGAGACCTATCAATAAAGCTCGTTTCCGGTGCCA
CCACCCTCCGCAGCAGCGACAGAACTTTGAACGCTATTTTCAAGACTCAG
CCATGCGCAGCCGTGGTGATACCCTCCGTACGTTTGTTGTGCGTGCGCAG
CTCGTACCCGCTACCCTGCCTCCCTCCTCCTTCCTTTCATCCCGAGACTA
TGGAGATGATGTCATTGCAGCTGCTGTCACGGTTGTGGACAAAGAGAACC
AGCAGCATTTGTTGCTGCCTGCCTGTGCACCAGCCATTCCGGGGGACGTG
GAAGATCGAGGGGTGGTGGTAGGATACTTCCAAAATCGGGTCACAGAGGG
AGTCGTCGGCGTTGCTTTACGCCTTGAGTTGGCCGTGGAGCTCTCAGAAG
AGGCAGCCCGTGAAGCTGTGGCAGCGACTGCGGCAGCCGCCATAGCGAAG
CAGGAGGGTAGGGAACGGGAGCGATTTCGATTGGTTTATGAGGTTGCTGC
TGACCCGGCGGACTGGGCCGTGTGGGGCATGACGAAGGGTACAGTGGAAG
CACGGTCGCCGGCTACCGGTGAAGGGAGCGACAAACAGCAGCAGACATTT
GCTCGGGTGGTGGTGGAATGCAAGTTGGTGCCTGTTCGTGCGGGCTTGCT
CGCCTGTCCTGTTCTAACGTTTGAGCCGGTGGACGTGCGTGCTGCTGTCT
CTCCCAGGAGTAGGAGAAAGAGCTATGTCAGGTGGGTAGGGCCTCGCGAT
ATTCTGGTTGTTTCGGCGCCGGGCTTGAAACGAATTCCGACTGTTCGTAT
GGTGTGA
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protein sequence of NO05G02700.1

>NO05G02700.1-protein ID=NO05G02700.1-protein|Name=NO05G02700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1169bp
MIILEPGLMARNLAELLDFIRMRFWDLGLSLLGLQKFDEKSIVCAARRNA
STKYTAGLGSAPSPRRRSPFPSPSSSSSSSLPVLTSLSDIDAYLRSSPSS
SFFPNSGSSSDNDGGKSVDLDDPRRVPLSPVALFARAAPWLPMTLDSVVA
FDEQYLRMTEVLVRYLEDGGRERFVGRVQAERASILLRKGEWEEARKVLR
RVAEYNLRRDFWVPLLSQVLRNLARCEKERGNAKAYVGTLLQILSLQCLD
EATGAYYRSELDEYVRQRMPGSSTSSSSPRLTRPLSLLVTARIKTTPRDL
VSIPPSVELGKTASVVVWLHLALQHPLPVDGLTLTLGGVAQLRDQRRLGA
DYGWIAVSSPANASAAATTGNDIDGGLVLSPPAITPRSPSPRRNIDLAAT
SNSLGSIDSTSNVSNVSLLYSSSNLPSDMTMTGSAAAASATEEGQQPEDN
LVWTLAGPLTLEPGVNELELVTTSLPPPGTYVYEKLILRWGSLILEQDRL
AALDPDTLDAAIKQCPPPRRFSALNKTPVRRAVGLTVVVKPPATTLTVLT
SPVSPPDSEHVHHLSVLLDTYSDTLTSPMLTLTQPALKAFEVKGPAYLSF
YPQKKTDNEDLGEDAPLHEEEVEVAWNGATATLVLPPILPPSTSLILTVA
LHPSPDVVDAFVRSRQDHQRLVSVQVQLTAEFNKDNILRRPVDAEREVIT
AAAAGALAVAPAACTSTASDAVSPRSFSISSSSSNTPRAVVPNQRRRSLS
LTTGTWGHDVREEALCRNTLRTGCEIVIQQPLTVVISVQDCSHWHSSRRY
FVQVLLRNRAPLPVILHACRLRPSPFYHIVVQDDEDGDSFSRSGKQGTHL
RNLLLAPGQEVRYAYLIERMVSAAAVGSNAAASSSSAFRESPSKMSVSAD
YTLESPRPINKARFRCHHPPQQRQNFERYFQDSAMRSRGDTLRTFVVRAQ
LVPATLPPSSFLSSRDYGDDVIAAAVTVVDKENQQHLLLPACAPAIPGDV
EDRGVVVGYFQNRVTEGVVGVALRLELAVELSEEAAREAVAATAAAAIAK
QEGRERERFRLVYEVAADPADWAVWGMTKGTVEARSPATGEGSDKQQQTF
ARVVVECKLVPVRAGLLACPVLTFEPVDVRAAVSPRSRRKSYVRWVGPRD
ILVVSAPGLKRIPTVRMV*
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Synonyms
Publications