NO05G02680, NO05G02680 (gene) Nannochloropsis oceanica

Overview
NameNO05G02680
Unique NameNO05G02680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2409
Alignment locationchr5:709358..711766 +

Link to JBrowse

Properties
Property NameValue
DescriptionFoie gras liver health family 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:709358..711766 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO05G02680 vs. NCBI_GenBank
Match: EWM28119.1 (Foie gras liver health family 1 [Nannochloropsis gaditana])

HSP 1 Score: 434.5 bits (1116), Expect = 7.200e-118
Identity = 248/493 (50.30%), Postives = 288/493 (58.42%), Query Frame = 0
Query:   39 VCALAYHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQNNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSALTNRWQAALMPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVLDFPVFEFRAKLGATTGQEGSEKSGSSIGMLEVQQYLFAREAGLLLQLSRYSELFQRTYAFIILQHQTLLRLLPPHSPPPPTADSEGVVGDVSARDS----AHLWALVAGWTVLQMWE 528
            VCALAY+DELGQVWQFLERYFKAQLPLRD+AWRT  P GT+GSTLVTIS LPVQ +AHDH +FR L      R +DYRAPYAHLNLVVCET++AYK+AV             + EEWLL+YVPLGTQNNTHD+Y+KIY+++AADFC K  GDRS MLT+FEQGV  SMGG GPAG    +G++LQQNHQEQWGDVM KIK VVGN F+ARSKAYQE+VREL++                        FFAKE LALMNEQ QLPGEALHHYQELSAL++ W AAL P+                                                                                    +P+LD+ V EFR ++ A   +E  +     +G L VQQYLFAREAG LL L+RYSEL +RT  FI+LQHQTL+RL                    +ARD     AHLWAL A W VLQ WE
Sbjct:   39 VCALAYYDELGQVWQFLERYFKAQLPLRDIAWRTPTPLGTTGSTLVTISTLPVQALAHDHPVFRKLA---NDRPNDYRAPYAHLNLVVCETSDAYKSAVXXXXXXXXXXXXXKQEEWLLMYVPLGTQNNTHDMYVKIYTKMAADFCMKAPGDRSCMLTVFEQGV--SMGGTGPAGP---SGVVLQQNHQEQWGDVMTKIKAVVGNAFVARSKAYQERVRELQD--------ETTAAAGVGADFFFKLFFAKEKLALMNEQFQLPGEALHHYQELSALSDHWHAALEPA---------------------------------------------------------GGTSVPDSLVTFHLSSSPSLASATSSALPLLDYSVSEFRGQVEAGGREEEGKDGARRVGPLHVQQYLFAREAGFLLHLARYSELLRRTQRFIMLQHQTLVRL----------------CSSSTARDDTPTVAHLWALAATWAVLQAWE 442          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_009829159.1 (hypothetical protein H257_05860 [Aphanomyces astaci] >ETV81301.1 hypothetical protein H257_05860 [Aphanomyces astaci])

HSP 1 Score: 116.7 bits (291), Expect = 3.300e-22
Identity = 89/292 (30.48%), Postives = 121/292 (41.44%), Query Frame = 0
Query:   46 DELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ--------------------NNTHDIYLKIYSRIAADFC--SKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            ++ G VWQFL      +LPLR + W+  L S        TI RL        H  F+ L     G   D      H+ +V CE  + YK  VK  + AWVD  T    EWL++YVPLGTQ                     +T  +Y KI+ R+  DF    K   DR   + + +    GS G  G            QQ H+ QW +V+ K+K  + + F AR   Y++Q+R L+                            KESLAL+  Q  L  +AL HY EL A+
Sbjct:   48 EDHGGVWQFLSPSLSQRLPLRGIVWKNHLQSNK------TIDRL--------HVNFQQLASSSSGGHVD-TTGLVHMFVVKCEDMDTYKAKVKPSLSAWVDRMTLHGHEWLVLYVPLGTQMPSSTSVARGLGLSALTQTFRDTSKVYRKIFDRMKGDFADNQKSKLDRFCKIDVLD----GSSGVPGQ-----------QQQHESQWSEVLIKLKACIMDAFDARCAEYEDQLRVLD------------GKRALSGWDFSSFLQVKESLALLYIQATLYDDALRHYDELEAI 297          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: POM62764.1 (Trafficking protein particle complex subunit 10, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 114.4 bits (285), Expect = 1.600e-21
Identity = 84/283 (29.68%), Postives = 132/283 (46.64%), Query Frame = 0
Query:   42 LAYHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ-----NNTHDIYLKIYSRIAADFCSK----VTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            + Y DE G VWQFL      +LPLR + WR           LV +++   Q+  H    F  +  ++ G+      P A + LV CE  ++YK+ V+  + AWVD  T    EWL++YVPLGT+     N  + IY KI+ R+ ADF  +    + G  +S  ++ ++ V       G +  G       QQ H+ QW +++ +++  V + F  +   Y+E +R L+                         F AKE LALM +Q+ L  +A+ H  EL A+
Sbjct:   23 VGYTDE-GGVWQFLAPSLSQRLPLRAIEWR----------NLVGVTKRIDQLPLH----FAEISAQNVGK----ELPLACIYLVKCEDLDSYKSVVRPPLSAWVDAMTAAKVEWLILYVPLGTRPKAAGNLPNPIYRKIFDRLRADFAHRKGGPLLGGATSTTSVLQERVCKIDTLEGTSVLGQ------QQQHESQWTELLLRLRHCVMDAFQIKCFQYEESLRVLD------------AKRGAAGWDFGAFFLAKEKLALMYQQMYLQDDAIRHLDELDAI 268          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: KYR02113.1 (trappc10-1 [Tieghemostelium lacteum])

HSP 1 Score: 112.8 bits (281), Expect = 4.800e-21
Identity = 78/277 (28.16%), Postives = 125/277 (45.13%), Query Frame = 0
Query:   42 LAYHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ---NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            + Y D+  +VW  +E      LPLR++ W+T+     +GST V + R+P++++  D    +N           Y+ PY +L LV CE  +AYK  +K K+K W+   T+R +EWL+VYV LG +     T  +   +Y RI  DF   V  DR   L   ++                      +  ++E W D + K+K  + ++       Y++++R+L+                         FF KESLA + E+ QL  +AL  Y EL  L
Sbjct:  107 ITYRDDC-KVWNIVESELLNHLPLRNITWKTK-----TGSTKV-VERMPIEILHCDDDRIKN-------AQELYKKPYLYLYLVHCEDADAYKNEIKNKIKTWIQTMTDRQQEWLIVYVSLGQKRLSELTSKLTRTVYDRIKNDF--NVKRDRCCQLRCCDE----------------------KNTYEELWDDFLVKMKEGIISSAEQYLTCYEDEIRKLD------------AKRILPGWSFLNFFFVKESLAFIYERAQLYEDALMQYYELEVL 333          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_008875776.1 (hypothetical protein H310_11019 [Aphanomyces invadans] >ETV95583.1 hypothetical protein H310_11019 [Aphanomyces invadans])

HSP 1 Score: 110.5 bits (275), Expect = 2.400e-20
Identity = 87/297 (29.29%), Postives = 125/297 (42.09%), Query Frame = 0
Query:   45 HDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNL--GGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ-----------------------NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGV-SGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            +++ G VWQFL      +LPLR + W+  L S        TI RL        H  F+ L      GG TS       HL +V CE  E+YK  +K  + +WVD    +  EWL++YVPLGTQ                        ++  +Y KI+ R+ +DF      D+S +    +  V  GS G  G            QQ H+ QW +V+ K+K  + + F  R   Y++Q+R L+                            KESLAL+  Q  L  ++L HY EL A+
Sbjct:   54 YEDHGGVWQFLSPSLSQRLPLRGIVWKNHLQSNK------TIDRL--------HVNFQQLEPSSPVGGTTS-----LVHLFVVKCEDMESYKAKIKPSLSSWVDRMALQGHEWLVLYVPLGTQAPTTLSSSSVARGLGLGALSQSFRDSSKVYRKIFERMKSDFADN-RSDKSKLDRFCKIDVLDGSSGVPGQ-----------QQQHESQWSEVLIKLKACIMDAFDVRCAEYEDQLRVLD------------GKRALSGWDFCSFLQVKESLALLYIQATLYDDSLRHYDELDAI 307          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_008875777.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV95584.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 110.5 bits (275), Expect = 2.400e-20
Identity = 87/297 (29.29%), Postives = 125/297 (42.09%), Query Frame = 0
Query:   45 HDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNL--GGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ-----------------------NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGV-SGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            +++ G VWQFL      +LPLR + W+  L S        TI RL        H  F+ L      GG TS       HL +V CE  E+YK  +K  + +WVD    +  EWL++YVPLGTQ                        ++  +Y KI+ R+ +DF      D+S +    +  V  GS G  G            QQ H+ QW +V+ K+K  + + F  R   Y++Q+R L+                            KESLAL+  Q  L  ++L HY EL A+
Sbjct:   54 YEDHGGVWQFLSPSLSQRLPLRGIVWKNHLQSNK------TIDRL--------HVNFQQLEPSSPVGGTTS-----LVHLFVVKCEDMESYKAKIKPSLSSWVDRMALQGHEWLVLYVPLGTQAPTTLSSSSVARGLGLGALSQSFRDSSKVYRKIFERMKSDFADN-RSDKSKLDRFCKIDVLDGSSGVPGQ-----------QQQHESQWSEVLIKLKACIMDAFDVRCAEYEDQLRVLD------------GKRALSGWDFCSFLQVKESLALLYIQATLYDDSLRHYDELDAI 307          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_003285558.1 (hypothetical protein DICPUDRAFT_86772 [Dictyostelium purpureum] >EGC37898.1 hypothetical protein DICPUDRAFT_86772 [Dictyostelium purpureum])

HSP 1 Score: 109.8 bits (273), Expect = 4.100e-20
Identity = 76/288 (26.39%), Postives = 130/288 (45.14%), Query Frame = 0
Query:   42 LAYHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ---NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL--TNRWQAALM 325
            + Y D+   VW+++E      LPLR+++W+T+     +G T V + ++P++++ ++    R          + YR PY +L LV C+  + YK  ++ K+K WV + TE+ +EWL+VYV LG +     T  +   +Y RI +DF   V  DR   L   +                          + + W D++ K+K  +  +       Y++++R+++                         FF KE LAL+ E+ QL  +AL  Y EL  L   NR Q  L+
Sbjct:   94 ITYQDDASSVWKYVEVELPNHLPLRNISWKTK-----TGHTKV-VDKMPIEILQYNDERIR----PSYDNQTLYRKPYLYLYLVHCDDPDIYKNTIRGKIKNWVSQMTEKGQEWLIVYVSLGPKRFGEITSKLSRTVYDRIKSDF--NVKRDRCCQLRFLDD----------------------SNRNDDLWDDLLMKMKEGIIASAEQYLTTYEDEIRKMD------------AKRNLPGWSYQNFFFIKEGLALIYERAQLYEDALMQYFELEVLFTENRSQFELI 335          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_012203397.1 (hypothetical protein SPRG_08777 [Saprolegnia parasitica CBS 223.65] >KDO25833.1 hypothetical protein SPRG_08777 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 106.7 bits (265), Expect = 3.400e-19
Identity = 83/295 (28.14%), Postives = 119/295 (40.34%), Query Frame = 0
Query:   44 YHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ-----------------------NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            + ++ G VWQF+      +LPLR++AW+  L          TI RL +      H   + L        S        L +V CE    YKT +K  + AWVD       EWL++YVPLGTQ                        ++  +Y KI+ ++ ADF  K   DR   L   E     ++ G  P           Q  H+ QW +++ K+KT +   F  R   Y+E++R L+                         F  KESLAL+  Q  L  +AL HY EL A+
Sbjct:   31 HFEDHGDVWQFVLPSLDERLPLRNIAWKNHLQVNK------TIDRLHIHFY-QVHTQAQLLKQPQATTGSVPPTGLVFLFVVKCEDLATYKTKIKPALSAWVDRMNLLKNEWLVLYVPLGTQATSSTAAAATVASRGLSAFGTSFRDSSKVYRKIFDKLRADFSDK--NDRLDRLCKIEVLEGNTVVGAAPG---------QQPQHEAQWSELLLKLKTCIMEAFETRCCEYEEELRLLD------------AKRSLSGWDFSSFFQVKESLALLYSQASLYDDALRHYDELEAI 295          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: CBN76500.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 104.8 bits (260), Expect = 1.300e-18
Identity = 84/288 (29.17%), Postives = 125/288 (43.40%), Query Frame = 0
Query:   50 QVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRD-GGRTSD-----YRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTER----------------HEEWLLVYVPLGTQNNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            ++W+++ER     +PLR +  +   P   SG T   I  LPV+ + H     R L G +   R  D     YRA +A + +V  E+ E YK  V+  ++AW+D+   R                                  D   KI+  + ADF SK  GDR S+++L+  G +   GG+              ++H +QW D++AK+  VV   F AR + Y  ++  L+                         F  KESLALM ++LQLP EAL  YQEL+AL
Sbjct:  167 RLWEYVERPLMVYMPLRKLLAK---PPAVSGPT--NIDELPVRCLVH-----RTLAGTEVAARLVDTPAERYRASFAFIYMVSAESQEHYKQTVRPLIRAWIDKVEARGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQGKIFWWLCADFYSKTPGDRCSLVSLYVDGNTPVKGGQKAKMLARSRPSASPRHHPKQWSDLLAKVGRVVLEVFEARVRCYASELGHLD------------ATRGMIGWDFGQFFVVKESLALMYKELQLPSEALLKYQELAAL 432          
BLAST of NO05G02680 vs. NCBI_GenBank
Match: XP_008605921.1 (hypothetical protein SDRG_02130 [Saprolegnia diclina VS20] >EQC41077.1 hypothetical protein SDRG_02130 [Saprolegnia diclina VS20])

HSP 1 Score: 104.4 bits (259), Expect = 1.700e-18
Identity = 82/295 (27.80%), Postives = 119/295 (40.34%), Query Frame = 0
Query:   44 YHDELGQVWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHALFRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTERHEEWLLVYVPLGTQ-----------------------NNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQGVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSKAYQEQVRELEEGAXXXXXXXXXXXXXXXXXXXXXXFFAKESLALMNEQLQLPGEALHHYQELSAL 316
            + ++ G VWQF+      +LPLR++AW+  L          TI RL +      H   + L       T         L +V CE    YKT +K  + AWVD       EWL++YVPLGTQ                        ++  +Y +I+ ++ ADF  K   DR   L   E     ++ G  P           Q  H+ QW +++ K+KT +   F  R   Y+E++R L+                         F  KESLAL+  Q  L  +AL HY EL A+
Sbjct:   31 HFEDHGDVWQFVLPSLDERLPLRNIAWKNHLQVNK------TIDRLYIH-FHQVHTQAQLLKQPSAMPTGVPPTGLVFLFVVKCEDLATYKTKIKPALSAWVDRMNLLKNEWLVLYVPLGTQATSSTTAATTVASRGLSAFGTSFRDSSKVYRRIFEKLRADFGDK--NDRLDRLCKIEVLEGNTVVGAAPG---------QQPQHEAQWSELLLKLKTCIMEAFETRCCEYEEELRLLD------------AKRSLSGWDFSSFFQVKESLALLYSQTSLYDDALRHYDELEAI 295          
The following BLAST results are available for this feature:
BLAST of NO05G02680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28119.17.200e-11850.30Foie gras liver health family 1 [Nannochloropsis g... [more]
XP_009829159.13.300e-2230.48hypothetical protein H257_05860 [Aphanomyces astac... [more]
POM62764.11.600e-2129.68Trafficking protein particle complex subunit 10, p... [more]
KYR02113.14.800e-2128.16trappc10-1 [Tieghemostelium lacteum][more]
XP_008875776.12.400e-2029.29hypothetical protein H310_11019 [Aphanomyces invad... [more]
XP_008875777.12.400e-2029.29hypothetical protein, variant [Aphanomyces invadan... [more]
XP_003285558.14.100e-2026.39hypothetical protein DICPUDRAFT_86772 [Dictyosteli... [more]
XP_012203397.13.400e-1928.14hypothetical protein SPRG_08777 [Saprolegnia paras... [more]
CBN76500.11.300e-1829.17conserved unknown protein [Ectocarpus siliculosus][more]
XP_008605921.11.700e-1827.80hypothetical protein SDRG_02130 [Saprolegnia dicli... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003602NSK003602Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02680.1NO05G02680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100036g41gene2432Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02680.1NO05G02680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02680 ID=NO05G02680|Name=NO05G02680|organism=Nannochloropsis oceanica|type=gene|length=2409bp
ATGGACCCGCCCCCACGGCCGTTGCATCCGCCTCCACTGCTCTCCTCCTC
TGGCCCAAAGTCCTCCCTCTCCTCCAACTCTGCCTCCCACTCCACCACTC
CAACCACCTCCACCGTGTGTGCCTTGGCCTACCATGACGAGCTCGGACAA
GTCTGGCAGTTTTTGGAGCGGTATTTTAAGGCGCAACTTCCCCTGAGAGA
TGTAGCTTGGCGCACCCGGCTGCCTTCGGGCACCTCGGGCAGCACCCTCG
TCACGATCTCGAGGCTGCCTGTGCAAGTGGTAGCCCACGACCATGCCCTC
TTCAGAAACCTGGGAGGACGAGACGGAGGTCGTACGAGCGATTATCGCGC
TCCATATGCGCATCTAAATCTAGTGGTTTGTGAGACGACCGAGGCGTACA
AGACCGCTGTAAAGGCCAAGGTCAAGGCCTGGGTCGACGAGCGAACAGAG
CGGCACGAAGAATGGTTGTTGGTCTATGTCCCCTTGGGCACGCAGAACAA
CACGCATGATATATACCTCAAGATTTATTCGAGGATAGCGGCGGACTTTT
GTAGCAAAGTGACGGGGGACCGGTCGAGTATGTTGACGCTGTTTGAGCAG
GGTGTGTCGGGTTCCATGGGGGGGCGAGGGCCCGCAGGTACCGGGGCGGG
GAACGGCATCATTCTGCAGCAGAATCATCAGGAGCAGTGGGGGGATGTTA
TGGCGAAAATTAAGACGGTAGTGGGGAACACATTTATTGCCCGTTCGAAG
GCTTATCAGGAGCAGGTCCGTGAGTTGGAGGAAGGGGCCTCTAGTCGTAC
TGCCACTGCTGCTGCTGCTGCTGCTGCCCCTGGGGAAGATTTCTTTTTCC
GCTTGTTTTTTGCCAAGGAGAGCTTGGCATTGATGAATGAGCAACTTCAG
CTTCCGGGGGAGGCTTTGCATCATTATCAGGAATTGTCTGCTTTAACCAA
TCGCTGGCAAGCGGCTCTGATGCCCTCTTCTGCTGCCGACTTTGGGAGGA
GTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGTAGTGGTAGAAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGTAGGAGGAGGAGTAGTAGTAGTAGTAGTAG
TAGTAGTGGTAGTAGTAGTGGAAATAGCGTGATCATGCCGCCCAAGACCC
TGATGATGTTTCAGCCCAGTCGAGTGGCTTCTTCTAGTGGTGGTAGAGGT
GGTGGGATGAACGCGATGGCCGGTGGTGGTGTTCCCGTATTGGATTTTCC
CGTCTTTGAATTTCGAGCGAAGCTCGGGGCAACGACGGGGCAAGAAGGCA
GCGAGAAGTCAGGGAGCAGCATTGGGATGCTCGAAGTACAGCAGTACCTC
TTTGCACGGGAAGCGGGCCTCTTACTGCAGTTGAGTCGGTATTCTGAGCT
GTTTCAACGCACCTACGCCTTCATCATCCTACAGCACCAGACATTACTGC
GCTTGCTACCCCCTCACTCGCCGCCACCACCAACCGCAGATTCGGAGGGG
GTTGTCGGTGATGTCAGCGCCAGAGACAGCGCTCACCTCTGGGCTTTAGT
AGCAGGATGGACCGTGCTCCAAATGTGGGAAGAATTCTTCAAGCAGCAGC
AGCAACAACAACAACAACAACAACAAAAAAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAAACAACAACAACAACAACAACAACAACAAC
AAACAACAACAACAACAACAACAACAACAACGGCAGCAAATGCAACCATC
CGCTCTTCCCAACTTGGCCTCTTCCTCCTTCTCTCCGTTCCCGCTGCCAG
CCGTTGCGGTCCCCCAACCGGAGACGACAGCGGGGGCACATCCTCCCTCC
CTGAGCAGCACCCTGTGTGCTTCTTCTGCCTTATCAGCAGGACCCCATGG
CAGCAGTAG
back to top

protein sequence of NO05G02680.1

>NO05G02680.1-protein ID=NO05G02680.1-protein|Name=NO05G02680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=803bp
MDPPPRPLHPPPLLSSSGPKSSLSSNSASHSTTPTTSTVCALAYHDELGQ
VWQFLERYFKAQLPLRDVAWRTRLPSGTSGSTLVTISRLPVQVVAHDHAL
FRNLGGRDGGRTSDYRAPYAHLNLVVCETTEAYKTAVKAKVKAWVDERTE
RHEEWLLVYVPLGTQNNTHDIYLKIYSRIAADFCSKVTGDRSSMLTLFEQ
GVSGSMGGRGPAGTGAGNGIILQQNHQEQWGDVMAKIKTVVGNTFIARSK
AYQEQVRELEEGASSRTATAAAAAAAPGEDFFFRLFFAKESLALMNEQLQ
LPGEALHHYQELSALTNRWQAALMPSSAADFGRSSGGGGGGGGSSGRSSS
SSSSSSSRRRSSSSSSSSSGSSSGNSVIMPPKTLMMFQPSRVASSSGGRG
GGMNAMAGGGVPVLDFPVFEFRAKLGATTGQEGSEKSGSSIGMLEVQQYL
FAREAGLLLQLSRYSELFQRTYAFIILQHQTLLRLLPPHSPPPPTADSEG
VVGDVSARDSAHLWALVAGWTVLQMWEEFFKQQQQQQQQQQQKNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTQQQQQQQQQQQQQQQQQQQHNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNKQQQQQQQQQQTTTTTTTTTTAANATI
RSSQLGLFLLLSVPAASRCGPPTGDDSGGTSSLPEQHPVCFFCLISRTPW
QQ*
back to top
Synonyms
Publications