NO05G02580, NO05G02580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02580 vs. NCBI_GenBank
Match: EWM28126.1 (Dimeric alpha-beta barrel [Nannochloropsis gaditana]) HSP 1 Score: 171.8 bits (434), Expect = 1.700e-39 Identity = 89/161 (55.28%), Postives = 113/161 (70.19%), Query Frame = 0 Query: 1 MDKWLRKIDRY--SPFPLFLVGLFAGCTLTFLLSRPNHQTMPQKPVVATASHPRRPVPGAFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALKANISGESYIESDLGFV 160 M++ LRK+ + SP P F G+ G ++F VV +S R+ +PGAFWL V VTF+R+EDV+IFK AFAPLA V++NE TLSY +A SDKDP VL+FERYVDK+DAYL VHR S F+VFRPQLAA++A ISGESYIES++GF+ Sbjct: 1 MERTLRKMFKTCGSPLPAFWCGVLLGLAMSF--------------VVIKSSPKRKAIPGAFWLTVQVTFKRAEDVDIFKTAFAPLAAFVEKNEPRTLSYSMAQSDKDPKTVLLFERYVDKNDAYLEVHRKSAPFKVFRPQLAAMEATISGESYIESNMGFM 147
BLAST of NO05G02580 vs. NCBI_GenBank
Match: OEU19805.1 (hypothetical protein FRACYDRAFT_216959 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 93.6 bits (231), Expect = 6.000e-16 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 0 Query: 59 FWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALK----ANISGESYIESDLGF 159 F L+V+++F E + F F PLA VK E TL+Y + +SD DPL V+I ERY DK++AYL++H+SS F FRP+L A++ ISG SYI+S +GF Sbjct: 11 FSLLVTISFDSIEYKQQFLKDFKPLADYVKTMETDTLAYEVLLSDNDPLKVMILERYRDKENAYLKIHKSSVPFLAFRPKLQAMQEKGHVTISGNSYIDSGIGF 114
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_002184789.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43848.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 93.2 bits (230), Expect = 7.800e-16 Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0 Query: 58 AFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAAL----KANISGESYIESDLGF 159 AF L V++ F S+ E F A +A V+ +E TLSY + +SDKD L V++ ERY DK+ A+LRVHR+S+ FQ FRP+L A+ K ISGES+++S +GF Sbjct: 5 AFSLFVTLKFSDSQFKEDFLRDIALVATHVRNSEPDTLSYEVLLSDKDDLTVVVMERYRDKEHAFLRVHRNSQPFQEFRPKLKAMQDDGKVTISGESFLDSGIGF 109
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_013897728.1 (hypothetical protein MNEG_9254 [Monoraphidium neglectum] >KIY98708.1 hypothetical protein MNEG_9254 [Monoraphidium neglectum]) HSP 1 Score: 87.8 bits (216), Expect = 3.300e-14 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 59 FWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALKANISGESYIESDLGFV 160 F L VS+TF+ E + + AA+ P+ V+ NE GTLSY L I D +PL L++ERYVD+ AY VHR+SE+ F+ + +K + G+SY+E++ GF+ Sbjct: 11 FVLAVSLTFKDLEQRDKWVAAWLPMVDQVRANEPGTLSYELCIGDTEPLKALVYERYVDR-AAYEDVHRTSEAMAAFKEVTSKIKMQVQGQSYVETNHGFM 110
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_002290903.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92655.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.1 bits (196), Expect = 6.900e-12 Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 0 Query: 57 GAFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEA------------------GTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALKAN----ISGESYIESDLGFV 160 GAF L+V++ F + F P+ V NE TLSY +AISDK+PL VL+ ERY DK++ YL VH+S + F FR QL ++ I+GESY+E+ LG+V Sbjct: 63 GAFVLLVNMKFATIDHRNTFLKLMEPVCNYVYSNEGPAISSTSTSXXSSGKLEQTTLSYQVAISDKNPLQVLVMERYSDKENGYLTVHKSGKEFLKFREQLKGMQDRGEVVINGESYLETSLGYV 187
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_005645517.1 (hypothetical protein COCSUDRAFT_83532 [Coccomyxa subellipsoidea C-169] >EIE20973.1 hypothetical protein COCSUDRAFT_83532 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 77.8 bits (190), Expect = 3.400e-11 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 58 AFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALK---ANISGESYIESDLGFV 160 AF LV++ ++ D ++F + F PLA V +E TL+Y L++SDK+PL ++IFERY + A VH+ S F+ F+ A N +GESYIE DLG++ Sbjct: 43 AFLLVITHKYKTIRDRDLFISLFEPLAKYVVHHEPETLAYELSVSDKNPLEIIIFERYTSQ-AALTEVHQQSAPFKKFKKAWAEANLEYENKTGESYIEKDLGYM 146
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_005842351.1 (hypothetical protein GUITHDRAFT_62719 [Guillardia theta CCMP2712] >EKX55371.1 hypothetical protein GUITHDRAFT_62719 [Guillardia theta CCMP2712]) HSP 1 Score: 75.1 bits (183), Expect = 2.200e-10 Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0 Query: 47 TASHPRRPVPGAFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALK----ANISGESYIESDLGF 159 T + +P +F L+V VTF + E FK +A A +++EA TLSY LA+SD+D L +I ER+ KDD YL H+ S F+ +R +L L+ ++G+SY +S+LG+ Sbjct: 10 TRADREKPTIASFILIVHVTFSSKKVKEDFKVLYAEEAEFCRKSEANTLSYELALSDRDELAGVIIERFRSKDD-YLS-HKESSVFKRYREKLKKLEESGDVKLNGQSYYQSNLGY 123
BLAST of NO05G02580 vs. NCBI_GenBank
Match: XP_011400553.1 (Autophagy-related protein 9 [Auxenochlorella protothecoides] >KFM27570.1 Autophagy-related protein 9 [Auxenochlorella protothecoides]) HSP 1 Score: 68.6 bits (166), Expect = 2.100e-8 Identity = 41/95 (43.16%), Postives = 51/95 (53.68%), Query Frame = 0 Query: 67 FRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLRVHRSSESFQVFRPQLAALKANI--SGESYIESDLGFV 160 F D +IF F PLA V E+E TLSY LAI+D DP +VLI ERY K D VH SE F F+ L +G+SY E +G++ Sbjct: 597 FESEADRDIFIDLFRPLAKYVAEHEPRTLSYDLAIADTDPTLVLIHERYATKKD-LTEVHHVSEPFLAFKKATQELPFPFVKTGQSYYEQGIGYM 690
BLAST of NO05G02580 vs. NCBI_GenBank
Match: PSC70176.1 (Extracellular basic protease [Micractinium conductrix]) HSP 1 Score: 67.8 bits (164), Expect = 3.500e-8 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 0 Query: 57 GAFWLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLR-VHRSSESFQVFRPQLAALKA 145 G F L V + F +D + F A + PLA VKENE GTL Y ++D +PL VL+FERY K AY HR+S+ + F+ Q A +A Sbjct: 5 GIFVLCVYLKFANVQDRDEFIAEWTPLAKWVKENEPGTLGYEAMVADTNPLKVLVFERYTSK--AYFNDAHRTSQPYLAFKEQQAKWRA 91
BLAST of NO05G02580 vs. NCBI_GenBank
Match: PRW33786.1 (Autophagy-related 9 [Chlorella sorokiniana]) HSP 1 Score: 65.5 bits (158), Expect = 1.700e-7 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 0 Query: 60 WLVVSVTFRRSEDVEIFKAAFAPLAVVVKENEAGTLSYGLAISDKDPLMVLIFERYVDKDDAYLR-VHRSSESFQVFRPQLAALK----ANISGESYIESDLG 158 WL + R E + F +APLA VK +E GTL+Y +AI+D DPL + +FERY K AY VH++SE + F+ A + ++G+SY E+ +G Sbjct: 14 WLKFASVADRDEFIHKF---WAPLAEYVKAHEHGTLAYEIAIADSDPLKIQVFERYQTK--AYFTDVHQTSEPYLAFKAAQAPWRKEHAVEVTGQSYYETGIG 111 The following BLAST results are available for this feature:
BLAST of NO05G02580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02580 ID=NO05G02580|Name=NO05G02580|organism=Nannochloropsis oceanica|type=gene|length=730bpback to top protein sequence of NO05G02580.1 >NO05G02580.1-protein ID=NO05G02580.1-protein|Name=NO05G02580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=160bpback to top Synonyms
Publications
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