NO05G02400, NO05G02400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02400 vs. NCBI_GenBank
Match: EWM28117.1 (dna polymerase i [Nannochloropsis gaditana]) HSP 1 Score: 465.3 bits (1196), Expect = 2.100e-127 Identity = 236/334 (70.66%), Postives = 275/334 (82.34%), Query Frame = 0 Query: 115 RIPPPIAIQPAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVS-FRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLELPMLSSPSSSSWVSLEHLRYLGVDEVEGEALMEEAMGAKGVGKGPFLKLLKEQQRPSVPF 448 ++ P P P+ FFILDATS LYRSY+SKYQLNDY+ + D+PLLLLGKEFAQ++++HNPAYVAA FDG RD VFRR LFP YK+NR+AQP ELLALVPRAM YL ALGC FRS HEGDDLMG+LSH+A ++P+VT +LVTEDKDM CLV D +T VMHPRTL++FD A VE+K+GVPPSLV DLL LAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANL+ VAA+PNLRGAKTLA KL +QKEDV +YRSVVALACDV L+LP P + LE LRY GVDE+EGE+L+ EAMGA G+G+GPFL+LL+ Q++ SVPF Sbjct: 93 QMSPRTPNMPVPTENCFFILDATSFLYRSYYSKYQLNDYE-ETDRPLLLLGKEFAQIMTQHNPAYVAAAFDGPRDQVFRRDLFPAYKRNREAQPPELLALVPRAMAYLEALGCRGVFRSTRHEGDDLMGSLSHMAKAVAPDVTVVLVTEDKDMFCLVDD--RTLVMHPRTLEVFDAARVEAKLGVPPSLVGDLLSLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLEDVAALPNLRGAKTLAAKLTQQKEDVRVYRSVVALACDVALQLPRAPDPRWTGTSPLEGLRYGGVDEIEGESLLLEAMGAPGIGRGPFLQLLRHQRQRSVPF 423
BLAST of NO05G02400 vs. NCBI_GenBank
Match: OLB11444.1 (hypothetical protein AUH10_09915 [Gammaproteobacteria bacterium 13_2_20CM_66_19]) HSP 1 Score: 163.7 bits (413), Expect = 1.300e-36 Identity = 96/256 (37.50%), Postives = 140/256 (54.69%), Query Frame = 0 Query: 132 FILDATSLLYRSYFSKY-QLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKL 387 F++DA+ ++R+Y S + D DG + + L+ R PAY+A FD RR +R ++P YK NR+ PA+L+ + R LG +F P +E DD++GTL+HL V + +T DKD+ LV D G F Q F +E GV P AD L L GD VD IPGV G+G +TA L++AF SLD +YA+L VA + LRGA +L +L ++ V++ R + +ACD++L Sbjct: 14 FLIDASVYVFRAYHSMLPDMRDRDGNPAHAVFGFARFLGDLIERVRPAYMAVAFDERRAGSYRNRIYPPYKANRERAPADLVLQLGHCRELCRCLGLAAFVDPEYEADDIIGTLAHL--MRGQGVRSAFITRDKDLAQLVRD-GDLFWDFGARGQ-FGYHDIERHFGVRPERFADYLALTGDEVDNIPGVPGIGHRTAASLMKAFDSLDEMYADLSRVARL-KLRGAGSLGVRLSAHRDSVFLARQLTRIACDLRL 264
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_011771427.1 (DNA polymerase I [Psychromonas ingrahamii] >ABM04873.1 fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and 3'->5' exonuclease [Psychromonas ingrahamii 37]) HSP 1 Score: 155.6 bits (392), Expect = 3.600e-34 Identity = 89/256 (34.77%), Postives = 142/256 (55.47%), Query Frame = 0 Query: 131 FFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKL 387 F ++D +S LYR++FS L + G+ + + L+ + NP++V FD + FR ++ YK NR + P +L + ++A+G P E DD++GTLS A + +TT++ T DKDM LV T +++ T + D V K G+PP L+ D L L GD VD IPGV GVG +TA+ +L+ GS+D++Y NLD +AA+ RG+KT+A+K++ +E + + + DV+L Sbjct: 9 FILVDGSSYLYRAFFSPPHLTNSAGEATGAVYGVVNMLQSLLKQFNPSHVVVVFDA-KGKTFRDDMYTEYKSNRPSMPDDLRIQIEPLHAVIKAMGLPILTIPGVEADDVIGTLSRQAS--AQGITTLISTGDKDMAQLVDT--NTLLINTMTNTVLDVEGVNEKFGIPPELIIDYLGLMGDKVDNIPGVPGVGEKTALAMLQGLGSMDDIYLNLDKLAAL-GFRGSKTIAKKMQDNEEMARLSYQLATIKTDVEL 258
BLAST of NO05G02400 vs. NCBI_GenBank
Match: PKN12537.1 (ribonuclease HI [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-4]) HSP 1 Score: 155.6 bits (392), Expect = 3.600e-34 Identity = 95/264 (35.98%), Postives = 141/264 (53.41%), Query Frame = 0 Query: 127 SSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLELPM 391 SS ++LD +S +YR+YF +L G +L K L+ H P Y+A DG R++ FRRAL+P YK RDA PA+L+ +P L AL + +P E DD++ TL+ +VT +VT DKD++ +VSD + ++ + V + GVPP LVAD+L LAGD D IPGV G+G +TA+ L++ FGSL+ V +L G+K E L +E + + + + DV LE+P+ Sbjct: 3 SSPQLYLLDGSSYIYRAYFGIRELATSGGMPTNAILGFTKLLLDLLQEHRPDYLAVVLDGPREETFRRALYPAYKAQRDAVPADLIPQLPYIRQILAALNIPTLEAPGFEADDVIATLARTYAADGIDVT--IVTGDKDLLQIVSD--RISLLDTMKGKRSGLPEVRDRFGVPPELVADVLGLAGDTSDNIPGVPGIGEKTAIGLVQRFGSLEE-------VLKWKSLVGSKKRREALSAYEEQARLSKLLATVRYDVPLEIPL 255
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_075607714.1 (MULTISPECIES: DNA polymerase I [Alteromonadales] >PDM57427.1 DNA polymerase I [Alteromonas pelagimontana]) HSP 1 Score: 154.8 bits (390), Expect = 6.100e-34 Identity = 101/312 (32.37%), Postives = 162/312 (51.92%), Query Frame = 0 Query: 131 FFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLE-LPMLSSPSSSSWVSLEHL-------RYLG--VDEVEGEALMEEAMGAKGVGKGP 433 F ++D +S L+R++ L + G+ + + L+ +++P+++A FD + FR ++ YK NR P EL + + +RA+G E DD++GTL+H A + + T++ T DKDM LV+ +++ T Q+ D V+ K G+PP LV D L L GD VD IPGV GVG ++A LL G +D +Y NLD +A + RG+KTLA K+++ +E I ++ ++ DVKLE P +P+ +L+HL R+ EV +A +E+ GA P Sbjct: 9 FILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVINMLRSLIKQYHPSHIAVVFDA-KGKTFRDEIYKEYKANRPQMPDELRSQIEPLHNIIRAMGLPIIIEDGVEADDVIGTLAHAA--TAKGIDTLISTGDKDMAQLVNKH--VMLINTMTNQLLDVEGVKEKFGIPPELVVDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDAIYKNLDKIADL-GFRGSKTLAVKMQEYEEQARISYTLATISLDVKLEYTPETLTPTQPDNDALKHLFAEYEFKRWHSEIASEVAADASAKESSGAVAPDTAP 314
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_018982138.1 (DNA polymerase I [Salinimonas chungwhensis]) HSP 1 Score: 153.7 bits (387), Expect = 1.400e-33 Identity = 98/300 (32.67%), Postives = 157/300 (52.33%), Query Frame = 0 Query: 131 FFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLE-LPMLSSPSSSSWVSLEHL-------RYLGVDEVEGEALMEEA 423 F ++D +S L+R++ L + G+ + + L+ ++NP+ +A FD + FR ++ YK NR P EL A + +RA+G E DD++GTL+ +A + T++ T DKDM LV+ +++ T Q+ D V+ K GVPP LV D L L GD VD IPGV GVG ++A LL G +D +Y NLD +A + N RG+K++A K++ +E + + + CDV+++ P +P+ +LE L R+L +EV +A +EA Sbjct: 9 FILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVINMLRSLIKQYNPSNIAVVFDA-KGKTFRDEIYKDYKANRPPMPQELGAQIKPLHDIIRAMGLPIIVEEGVEADDVIGTLARIA--TEKRIDTVISTGDKDMAQLVNQH--ITLINTMTNQVMDIEGVKEKFGVPPELVIDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDEIYQNLDKIAEL-NFRGSKSMAAKMQDYEEQARLSYELATIKCDVEMDYCPETLTPTEQDNTALETLFTEYEFKRWL--NEVSSQAAADEA 300
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_101039856.1 (DNA polymerase I [Psychromonas sp. MB-3u-54] >PKH01967.1 DNA polymerase I [Psychromonas sp. MB-3u-54]) HSP 1 Score: 151.8 bits (382), Expect = 5.200e-33 Identity = 87/256 (33.98%), Postives = 141/256 (55.08%), Query Frame = 0 Query: 131 FFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKL 387 F ++D +S LYR++FS L + G+ + + L+ + NP++V FD + FR ++ YK NR + P +L + ++A+G P E DD++GTLS A + +TT++ T DKDM LV T +++ T + D V K G+PP L+ D L L GD VD IPGV GVG +TA+ +L+ GS+D++Y NL+ +AA+ RG+KT+A+K++ + + + + DV+L Sbjct: 9 FILVDGSSYLYRAFFSPPHLTNSAGEATGAVYGVVNMLQSLLKQFNPSHVVVVFDA-KGKTFRDDMYTEYKSNRPSMPDDLRIQIEPLHEVIKAMGLPILTIPGVEADDVIGTLSRQAS--ARGITTLISTGDKDMAQLV--DANTLLINTMTNTVLDVQGVNEKFGIPPELIIDYLGLMGDKVDNIPGVPGVGEKTALAMLQGLGSMDDIYLNLEKLAAL-GFRGSKTMAKKMQDNEAMARLSYQLATIKTDVEL 258
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_018651072.1 (DNA polymerase I [Actinobacillus capsulatus]) HSP 1 Score: 151.4 bits (381), Expect = 6.800e-33 Identity = 94/256 (36.72%), Postives = 141/256 (55.08%), Query Frame = 0 Query: 133 ILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL 389 ++D +S LYR++ + L + +G+ + + L+++ P+++A FD + FR LF YK +R P +L A V T ++ALG E DD++GTL+ A NV ++ T DKDM LV+D +++ + D V K G+PP L+ D L L GD D IPGVKGVG +TA+ LL+ GSL +YANLD VA + + RGAKTLA KL +KE ++ + + DV+LE+ Sbjct: 11 LVDGSSYLYRAFHAFPPLTNKNGEPTGAMYGVLNMLKSLITQVEPSHIAVVFDA-KGKTFRDELFEQYKSHRPPMPDDLRAQVQPLHTIIKALGIPLISIEGVEADDVIGTLAVQAANDGKNV--LISTGDKDMAQLVNDH--IMLINTMNNTLLDREGVIEKYGIPPELIIDYLALQGDASDNIPGVKGVGEKTALGLLQGIGSLKEIYANLDQVATL-SFRGAKTLAPKLEAEKEAAYLSYLLATIKTDVELEV 260
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_013752484.1 (DNA polymerase I [Glaciecola sp. 4H-3-7+YE-5] >AEE20984.1 DNA polymerase I [Glaciecola sp. 4H-3-7+YE-5]) HSP 1 Score: 151.0 bits (380), Expect = 8.900e-33 Identity = 97/306 (31.70%), Postives = 162/306 (52.94%), Query Frame = 0 Query: 121 AIQPAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL-PMLSSPSSSSWVSLEHLRYLGVDEVEGEALMEEAMGA 426 A P + F ++D +S L+R++ L + G+ + + L+ + NP ++A FD + FR ++ YK NR + P EL + + ++A+G E DD++GTL+ A L + T++ T DKDM LV++ +++ QI D V K G+PP LV D L L GD VD IPGV GVG ++AV LL+ GS++ +Y NLD +A + + RGAK +A+K+R+ +E + ++ + DV+++ P SP+ +++ L L E+E + ++EA A Sbjct: 7 ATTPVIPNNPFILVDGSSYLFRAFHGMPPLTNSKGQDTGAVYGVINMLRSLIKQFNPTHMAVVFDA-KGKTFRDEIYTEYKANRPSMPEELRSQIAPLHKIIQAMGLPIIVESGVEADDVIGTLADQASKL--GIPTLISTGDKDMAQLVNEH--VTLINTMNNQIMDPQGVVEKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAVGLLQGIGSINEIYQNLDKIATL-DFRGAKKMADKMREYEEQARLSYTLATIKLDVEMDCSPTSLSPTEANYSELRDL----FAELEFKRWLKEATDA 302
BLAST of NO05G02400 vs. NCBI_GenBank
Match: WP_008305120.1 (DNA polymerase I [Paraglaciecola agarilytica] >GAC06269.1 DNA polymerase I [Paraglaciecola agarilytica NO2]) HSP 1 Score: 151.0 bits (380), Expect = 8.900e-33 Identity = 97/306 (31.70%), Postives = 162/306 (52.94%), Query Frame = 0 Query: 121 AIQPAPSSEFFFILDATSLLYRSYFSKYQLNDYDGKIDKPLLLLGKEFAQLVSRHNPAYVAACFDGRRDDVFRRALFPGYKQNRDAQPAELLALVPRAMTYLRALGCVSFRSPIHEGDDLMGTLSHLACTLSPNVTTILVTEDKDMMCLVSDQGKTFVMHPRTLQIFDEAAVESKMGVPPSLVADLLCLAGDPVDGIPGVKGVGPQTAVRLLRAFGSLDNLYANLDAVAAVPNLRGAKTLAEKLRKQKEDVWIYRSVVALACDVKLEL-PMLSSPSSSSWVSLEHLRYLGVDEVEGEALMEEAMGA 426 A P + F ++D +S L+R++ L + G+ + + L+ + NP ++A FD + FR ++ YK NR + P EL + + ++A+G E DD++GTL+ A L + T++ T DKDM LV++ +++ QI D V K G+PP LV D L L GD VD IPGV GVG ++AV LL+ GS++ +Y NLD +A + + RGAK +A+K+R+ +E + ++ + DV+++ P SP+ +++ L L E+E + ++EA A Sbjct: 7 ATTPVIPNNPFILVDGSSYLFRAFHGMPPLTNSKGQDTGAVYGVINMLRSLIKQFNPTHMAVVFDA-KGKTFRDEIYTEYKANRPSMPEELRSQIAPLHKIIQAMGLPIIVESGVEADDVIGTLADQASKL--GIPTLISTGDKDMAQLVNEH--VTLINTMNNQIMDPQGVVEKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAVGLLQGIGSINEIYQNLDKIATL-DFRGAKKMADKMREYEEQARLSYTLATIKLDVEMDCSPTSLSPTEANYSELRDL----FAELEFKRWLKEATDA 302 The following BLAST results are available for this feature:
BLAST of NO05G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02400 ID=NO05G02400|Name=NO05G02400|organism=Nannochloropsis oceanica|type=gene|length=2141bpback to top protein sequence of NO05G02400.1 >NO05G02400.1-protein ID=NO05G02400.1-protein|Name=NO05G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=448bpback to top Synonyms
Publications
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