NO05G02390, NO05G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02390 vs. NCBI_GenBank
Match: EWM28110.1 (ribosomal protein l11 methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 386.7 bits (992), Expect = 9.500e-104 Identity = 241/426 (56.57%), Postives = 293/426 (68.78%), Query Frame = 0 Query: 30 LFSAISQAFILPPPCHSSFATPSTDYHQSRRSNLQPLPNTAAAEATVVEGGAANQE--SDRQFTVKIKRRLKEQQHYRVTFVKEIKELGELTDALIEQGALEVSYFTAEPLSFSLTLPVEG------TIEVEAIMHLAWTMIERQQXXXXXXXXXXXXXXXXXXXXXGWKYEKEIVLNAMNWFKAAAEPGFSPVSVGRFQVVPVQSYHDPP------PLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRRVHAERWVDMLSEAAVS 442 L S +S P HS + S YH SR++ + + ++ T + A E +D++FT K LKEQ+ + VTF ++L EL+D LIE GALEVS SF+LT+ ++G + +E +MH A + + W YE+E VLNA+NW KAA + GF PV+VGRFQVVPVQ+Y++ P ++P Q+ ILPGEGWGDG HP+T LCLDFLSQEG++CGGERV+DYG GSGILSIAAVQ+GAREAVGIDVCYDALASA NV LNGV+QEVEL+HPREV XXXXXXXXXXXXXXXXXXXXAM NTI+GAV+ GGWLVLSGLRPEQVEVIK+KYG +V+W+E LE+ EEV NPTFGTGAGLWVRLVGRRV +RWV+ LSEAAVS Sbjct: 10 LASILSTGCAFQPLVHSPLSYSS--YHGSRQTFGKCNAASFISDVTEKDRAALEAEKLADQEFTRAAKSLLKEQKKFCVTFDSNFEKLSELSDELIECGALEVSLDPMNLKSFALTVDMKGKSLEDSSRALENLMHSALGALPQ----------LLECNEAENRSHPSWSYEEERVLNAVNWQKAAIQEGFPPVNVGRFQVVPVQTYYELPLRPQDSYQPSQPPRGTHQVRILPGEGWGDGHHPTTMLCLDFLSQEGIVCGGERVVDYGCGSGILSIAAVQLGAREAVGIDVCYDALASATTNVRLNGVEQEVELLHPREVVXXXXXXXXXXXXXXXXXXXXAMSNTILGAVREGGWLVLSGLRPEQVEVIKRKYGDHVRWDESLERAEEVENPTFGTGAGLWVRLVGRRVLGDRWVEALSEAAVS 423
BLAST of NO05G02390 vs. NCBI_GenBank
Match: CBN74743.1 (ribosomal protein L11 methyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 155.6 bits (392), Expect = 3.600e-34 Identity = 98/250 (39.20%), Postives = 134/250 (53.60%), Query Frame = 0 Query: 203 WFKAAAEPGFSPVSVGRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGR-----------RVHAERWVDMLSEAAVS 442 W + GF V++ R Q+ VQ + P S + + +L G+GWGDG HPST +CLDFL E + GGE V+DYGTGSG+L+ AAV +GA+ ID+ + LA A+ N LLNG+ ++V ++H REV M ++ AVK GG L LSGLRP +I+ ++GK + W+ GLE E +PT+G +VRLVGR R ER LSEAAV+ Sbjct: 286 WEATRSSEGFDTVTMRRLQISAVQRREEQVPSS----RGLRSVKLLEGQGWGDGEHPSTWMCLDFL--ESAVEGGEEVVDYGTGSGVLAAAAVVLGAKHVTAIDIDVEILAHARQNFLLNGISEKVLVLHGREVSIGDLSAEIVVANMIAGPMRRQMAALVL-AVKEGGLLCLSGLRPSDAPLIRSEFGKYMDWDVGLEASRE--SPTWGE----YVRLVGRSKPGLALGGGLRAELER---ALSEAAVA 519
BLAST of NO05G02390 vs. NCBI_GenBank
Match: GAX10040.1 (hypothetical protein FisN_25Lh051 [Fistulifera solaris]) HSP 1 Score: 120.6 bits (301), Expect = 1.300e-23 Identity = 80/225 (35.56%), Postives = 120/225 (53.33%), Query Frame = 0 Query: 236 AKPEEQQQ-----QLCILPG-EGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVD-QEVELIH-----PREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQW-----EEGLEKVEEVRNPTFGTGAGLWVRLVGRRVHAE--RWVDMLSEAAVS 442 A+P +QQ+ + +L G GWG G HP+T LCL++L ++ I GGE V+DYG GSGILSIAA+ +GA VG+D+ +AL +A+ NV LN D E +H P E+ +M ++ ++ G L LSG+RP +V +K YG++++W E + E ++G G W RLVGR+ A+ ++ +SE AVS Sbjct: 94 AEPPQQQENGLIRSIYLLMGRNGWGTGVHPTTRLCLEWLCEQ--IQGGEIVLDYGCGSGILSIAALHMGAARCVGVDIEAEALITAERNVALNEYDSSRFEGLHTREILPYEIVPGRGVDVCIANILIGQLVRPSMVAALVSNIRNNGILCLSGIRPHEVASLKAAYGESIEWIDDHYAELSAEETEGSLASYGFDCGRWSRLVGRKRAADDKSEIERMSELAVS 316
BLAST of NO05G02390 vs. NCBI_GenBank
Match: XP_002186191.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65661.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.8 bits (299), Expect = 2.200e-23 Identity = 75/214 (35.05%), Postives = 114/214 (53.27%), Query Frame = 0 Query: 247 ILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVEL-IHPREVXXXXXXXXXXXXXXXXXXXXXA-------MRNTIMGAV----KPGGWLVLSGLRPEQVEVIKKKYGKNVQWEE-GLEKVEEVRNP----TFGTGAGLWVRLVGRRVHAERW--VDMLSEAAVS 442 +L GWG G HP+T LCLD++ Q + G V+DYG GSGILS+AA+ GAR +G+DV +AL +A NV +NG D +H REV A +R +++ A+ PGG + LSG+RP +V+ +K YG++++W + ++ P ++G G W RLVGR+ ++R ++ +SE AVS Sbjct: 94 LLGRNGWGTGVHPTTRLCLDWICQ--TVQNGNVVLDYGCGSGILSVAALHNGARRCIGVDVEAEALVTASRNVQINGFDDSTFAGLHVREVLPYGLTTSNTDNDGVGVDVVVANILIGQLVRPSMVAAIVTNLAPGGLVCLSGIRPHEVDSLKVAYGEHMEWLDCQYAELSADATPGSLQSYGFDCGRWSRLVGRKTSSDRGGDIERMSELAVS 305
BLAST of NO05G02390 vs. NCBI_GenBank
Match: EJK63158.1 (hypothetical protein THAOC_16202 [Thalassiosira oceanica]) HSP 1 Score: 118.6 bits (296), Expect = 4.800e-23 Identity = 65/204 (31.86%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 247 ILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREV-----XXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLE---KVEEVRN--PTFGTGAGLWVRLVGRRVHAERWVDMLSEAAV 441 +L GWG G HP+T LCL+F+ + + G+ ++DYG GSGILS+ A+ +GA +G+D+ +AL +A+ N+ LN + +H REV +M ++ +K GG + LSG+RP++V+ +K+ Y +N++W E E N ++G G W RLVGR+ + +++ +SE A+ Sbjct: 137 LLGRNGWGTGVHPTTRLCLEFIEKN--VNEGDTLLDYGCGSGILSVGALHVGASRVIGVDIEAEALVTAERNLELNEFSERASFLHTREVLPFEICPPFGVDICVANILIGQLVRPSMVAALLSNLKDGGLICLSGIRPDEVDSLKEAY-ENIEWLEDQYAELTATETTNCIESYGFDVGNWARLVGRKKSSSGFIERMSELAI 337
BLAST of NO05G02390 vs. NCBI_GenBank
Match: GAX18076.1 (hypothetical protein FisN_25Hh051 [Fistulifera solaris]) HSP 1 Score: 117.9 bits (294), Expect = 8.200e-23 Identity = 73/203 (35.96%), Postives = 110/203 (54.19%), Query Frame = 0 Query: 252 GWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVD-QEVELIH-----PREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLE---KVEEVRN--PTFGTGAGLWVRLVGRRVHAE--RWVDMLSEAAVS 442 GWG G HP+T LCL++L ++ I GGE V+DYG GSGILSIAA+ +GA +G+D+ +AL +A+ NV LN D E +H P E+ +M ++ ++ G L LSG+RP +V+ +K YG++++W + EE ++G G W RLVGR+ A+ ++ +SE AVS Sbjct: 5 GWGTGVHPTTRLCLEWLCEQ--IQGGEVVLDYGCGSGILSIAALHMGAARCIGVDIEAEALITAERNVALNEYDSSRFEGLHTREILPYEIVPGRGVDVCIANILIGQLVRPSMVAALVSNIRDDGLLGLSGIRPHEVDSLKAAYGESMEWMDDQYAELSAEETEGSLASYGFDCGRWSRLVGRKRAADGKSEIERMSELAVS 205
BLAST of NO05G02390 vs. NCBI_GenBank
Match: CEL95384.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 114.4 bits (285), Expect = 9.100e-22 Identity = 75/212 (35.38%), Postives = 110/212 (51.89%), Query Frame = 0 Query: 219 RFQVVPVQ--SYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRN---TIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 R +VP + S P PL Q Q + + +GWG G+HPST LC++FL + + G+ V+DYG GS ILS+AA ++GA +G+D+ D L +A+ N LNGVD VEL+H REV ++ + AV+ GWL LSG+RP QV+ + + Y NV ++ + V + +G W +VGRR Sbjct: 128 RVLIVPSEAPSSDVPVPLGG----QLQDIHLRLHDGWGTGAHPSTRLCMEFLERR--VRRGDAVLDYGVGSAILSVAAAKLGASHVLGVDIDDDILTNARENCRLNGVDGCVELMHTREVVTGDTAISGRFDGCVANILVGPLKRLAPALGDAVRADGWLCLSGVRPSQVDDVMQAY--NVFYDFDHKAVRTGVHDVYGE----WACVVGRR 327
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_070071754.1 (50S ribosomal protein L11 methyltransferase [Acidihalobacter prosperus] >AOV16158.1 ribosomal protein L11 methyltransferase [Acidihalobacter prosperus]) HSP 1 Score: 106.7 bits (265), Expect = 1.900e-19 Identity = 75/217 (34.56%), Postives = 105/217 (48.39%), Query Frame = 0 Query: 212 FSPVSVG-RFQVVPVQSYHDPP-PLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWE--EGLEKVEEVRNPTFGTGAGLWVRLVGR 425 F P+ G R V P S+ DPP PL+ LC+ PG +G G+HP+T LCL +L + G RV+DYG GSG+L+IAA+++GAREA G+D+ AL + + N N +D V +H A+ +T++ +KPGG L+LSG+ Q E Y + + W E LE WVRL GR Sbjct: 101 FQPMRFGERLWVCP--SWCDPPDPLAV-------NLCLDPGLAFGTGTHPTTALCLQWLDRHAQ--AGTRVLDYGCGSGVLAIAALKLGAREAWGVDIDPQALTATRDNAARNDIDDNV--LHTSLPEVLGDWQADLVVANILSGPLIALADTLIAHIKPGGQLLLSGILDTQAEATGAAYAERIDWSIPETLEG---------------WVRLSGR 289
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_105481087.1 (50S ribosomal protein L11 methyltransferase [Burkholderiales bacterium] >SPE33687.1 Ribosomal protein L11 methyltransferase [Burkholderiales bacterium]) HSP 1 Score: 106.3 bits (264), Expect = 2.500e-19 Identity = 75/228 (32.89%), Postives = 110/228 (48.25%), Query Frame = 0 Query: 198 LNAMNWFKAAAEPGFSPVSVGRFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQWEEGLEKVEEVRNPTFGTGAGLWVRLVGRR 426 L+ +W + + F+P+ VGR +VP S+H+PP A + I PG +G G+HP+T LCL +L Q + G V+DYG GSGILSI A +GA E VG+D+ A+ +A++N N V P E+ + T++ +KP G +VLSG+ QV+ + Y ++R TFGT G WV +VG R Sbjct: 97 LDDCDWVR-QTQSQFAPICVGRIWIVP--SWHEPPQPGA------CNVRIDPGVAFGTGTHPTTRLCLAWLDQH--LVPGSSVLDYGCGSGILSICAAMLGAAEVVGVDIDEQAVLTARSNAQRNAVPARYTC--PEELARRAPSSFDLVIANILANPIVLLAPTLVRHLKPCGSIVLSGILERQVDAVLAAYRL---------ADPDLRLSTFGTDEG-WVGIVGIR 301
BLAST of NO05G02390 vs. NCBI_GenBank
Match: WP_095503249.1 (MULTISPECIES: 50S ribosomal protein L11 methyltransferase [Neisseria] >PJO10430.1 50S ribosomal protein L11 methyltransferase [Neisseria sp. N95_16] >PJO78566.1 50S ribosomal protein L11 methyltransferase [Neisseria sp. N177_16]) HSP 1 Score: 103.2 bits (256), Expect = 2.100e-18 Identity = 71/201 (35.32%), Postives = 102/201 (50.75%), Query Frame = 0 Query: 197 VLNAMNWFKAAAEPGFSPVSVG-RFQVVPVQSYHDPPPLSAKPEEQQQQLCILPGEGWGDGSHPSTHLCLDFLSQEGVICGGERVIDYGTGSGILSIAAVQIGAREAVGIDVCYDALASAKANVLLNGVDQEVELIHPREVXXXXXXXXXXXXXXXXXXXXXAMRNTIMGAVKPGGWLVLSGLRPEQVEVIKKKYGKNVQW 397 +L +W + + F P+ + R + P S+HD P+E L + PG +G GSHP+T LCL +L + + GGE V+DYG GSGIL+IAA+++GA AVG+D+ A+ ++KAN N V + L P V M + G K GG ++LSGL EQVE + + YG QW Sbjct: 94 ILEDQDWVR-LTQAQFDPIQISERLWITP--SWHD------APDENAVNLQLDPGLAFGTGSHPTTRLCLQWLDAQ--LKGGESVLDYGCGSGILAIAALKLGAGSAVGVDIDEQAIRASKANADQNNVQAQFYL--PDAVPEGQFDVVVANILANPLRMLGEM---LAGRTKSGGRIILSGLLDEQVEELSEIYG---QW 275 The following BLAST results are available for this feature:
BLAST of NO05G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02390 ID=NO05G02390|Name=NO05G02390|organism=Nannochloropsis oceanica|type=gene|length=3117bpback to top protein sequence of NO05G02390.1 >NO05G02390.1-protein ID=NO05G02390.1-protein|Name=NO05G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=442bpback to top Synonyms
Publications
|