NO05G02350, NO05G02350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02350 vs. NCBI_GenBank
Match: EWM28287.1 (ferredoxin (2fe-2s) [Nannochloropsis gaditana]) HSP 1 Score: 274.6 bits (701), Expect = 2.400e-70 Identity = 135/173 (78.03%), Postives = 146/173 (84.39%), Query Frame = 0 Query: 29 MRIFALAALVCGCSLSVSKAFILPLSGTRGVHCRRTSAVKVVPLELEGQLDPTKSWEVKMTYLGETKVLTVCEDTPILEAALKEWDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEKKATTEQKSKFNVFG 202 M AL L C S+++AF+ + G R + +R A+ VVPLELEGQLDPTK+W+VKMTY GETKVLTV EDT ILEAA KEWDVPCSCRNGICTTCAGR+IA P SKKEAIHGLSAEQSKNGFVLTCQTHP GPGLEVELGMYDTVYESQYGQYEKKATTEQKSKFNVFG Sbjct: 1 MHSLALTLLAC-FIFSIAQAFVPCVPGLRAKNAQRVGAINVVPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKEWDVPCSCRNGICTTCAGRVIANPDSKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKATTEQKSKFNVFG 172
BLAST of NO05G02350 vs. NCBI_GenBank
Match: EWM27804.1 (phenylacetate- oxygenase subunit [Nannochloropsis gaditana]) HSP 1 Score: 140.2 bits (352), Expect = 7.100e-30 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 0 Query: 70 VPLELEGQLDPTKSWEVKMTYLGETKVLTVCEDTPILEAALKEW-DVPCSCRNGICTTCAGRII-AMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEKKA--TTEQKSKFNVF 201 VP +LEG+LDP + W+V M+ GETK ++V E T +L+AA + + D PC CRNG+CTTCA + GS AI LS EQ ++GF+L+CQT+P GPGLEV L + VYESQY +YEKKA E+K FN+F Sbjct: 47 VPPDLEGRLDPKRHWDVVMSLNGETKTVSVSEGTSLLDAAEEAFGDPPCMCRNGVCTTCAAEVTRGGHGSWVAAIESLSPEQQESGFILSCQTYPCGPGLEVRLNAQEEVYESQYAKYEKKAHEELEKKKGFNIF 181
BLAST of NO05G02350 vs. NCBI_GenBank
Match: CEM03311.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 119.4 bits (298), Expect = 1.300e-23 Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 0 Query: 67 VKVVPLELEGQLDPTKSWEVKMTYLGETKVLTVCEDTPILEAALKEW-DVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQ--SKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYE 187 V VP++LEG+LDP++SW +++ Y G+ + + V E T +LEAA W D PC CRNG+CT+CAGRI+ + I+ S E+ G+VLTCQT+ GPGL+VEL + VY QYG++E Sbjct: 3 VPEVPVDLEGRLDPSRSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
BLAST of NO05G02350 vs. NCBI_GenBank
Match: CBJ29495.1 (ferredoxin [Ectocarpus siliculosus]) HSP 1 Score: 80.9 bits (198), Expect = 5.100e-12 Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 0 Query: 41 CSLSVSKAFILPLSGTRGVHCRRTSAVKVVPLELEGQLDPTKSWEVKMTYLGETKVLTVCEDTPILEA-ALKEWDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEKKATTEQKSK 197 C L ++ F+ P CRR + + PL +VK+T G + + + E IL+ + D P SCR+G+CT CA + A + K L E S GFVLTC + GPG+E+ELG+ D +YE+QYG+ + Q++K Sbjct: 12 CMLDLTSGFVFPAPAVS--TCRR-ARMSSSPLRAAN--------DVKVTVEGVVRTVALEEGVSILDGLEAHDIDAPHSCRSGLCTECAAMVTANLDNVKLEAAVLDPEISARGFVLTCSSTVAGPGVELELGVGDKMYEAQYGELVQGHNDAQEAK 157
BLAST of NO05G02350 vs. NCBI_GenBank
Match: XP_005538458.1 (similar to ferredoxin [Cyanidioschyzon merolae strain 10D] >BAM82422.1 similar to ferredoxin [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10 Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0 Query: 85 EVKMTYLGETKVLTVCEDTPILEA--ALKEW-DVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHP---IGPGLEVELGMYDTVYESQYGQYEKKA 190 E+ + Y T+V+ ILEA A W +VP SCR G+CTTCA +++ G ++ L A K GF+LTC + P GP + + LG YD VYE QYG++EK A Sbjct: 83 EITVEYQDRTEVVRCQPGQSILEAVEASGLWTEVPSSCRAGVCTTCAAWLLS--GDVEDPFAALDANIRKEGFILTCSSTPKADAGP-VRIRLGAYDQVYEMQYGRFEKAA 190
BLAST of NO05G02350 vs. NCBI_GenBank
Match: WP_054466915.1 (ferredoxin [Planktothricoides sp. SR001] >KOR36039.1 ferredoxin [Planktothricoides sp. SR001]) HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 0 Query: 82 KSWEVKMTYLGETKVLTVCEDTPILEAA-LKEWDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQ 185 K++ V++ + GET LTV ED I+E A +P SC G+CTTCAG+II ++ GLS E K G+VL C +P L++E D VY+ Q+G+ Sbjct: 3 KTYTVEIHHQGETHTLTVAEDQKIIEVAEASGLHLPNSCNAGVCTTCAGKIIGEGSVEQSEGMGLSPELQKEGYVLLCVAYP-RSDLKIETEKEDEVYDRQFGR 105
BLAST of NO05G02350 vs. NCBI_GenBank
Match: WP_099532141.1 (ferredoxin [Limnothrix sp. PR1529] >OCQ95833.1 ferredoxin [Limnothrix sp. P13C2] >OKY73216.1 ferredoxin [Limnothrix sp. CACIAM 69d] >PIB14820.1 ferredoxin [Limnothrix sp. PR1529]) HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0 Query: 83 SWEVKMTYLGETKVLTVCEDTPILEAALKE-WDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEK 188 +++V++ + G+T VL V +DTPIL AA +P SC G+CTTCA R++ +++ GLS + GF L C P L+++ G D VYE Q+GQ++K Sbjct: 4 TYQVEIQHEGQTHVLQVADDTPILTAAAAAGLTLPSSCNAGVCTTCAARVVEGTIEPGDSM-GLSPDLRTKGFALLCTAKP-RSNLKIQTGCEDEVYELQFGQFQK 107
BLAST of NO05G02350 vs. NCBI_GenBank
Match: AFZ12828.1 (ferredoxin (2Fe-2S) [Crinalium epipsammum PCC 9333]) HSP 1 Score: 75.1 bits (183), Expect = 2.800e-10 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 0 Query: 78 LDPTKSWEVKMTYLGETKVLTVCEDTPILEAA-LKEWDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEKK 189 L K + V++ + G T L V ED I+ AA D+P SC G+CTTCAGRII + E + G+S E + G+VL C +P L++E D +YE Q+GQ++K+ Sbjct: 8 LSMPKMYTVQIEHQGNTHTLQVPEDQIIIRAASAAGLDLPSSCNAGVCTTCAGRIIEGKVDQAEGM-GVSPELQEKGYVLLCVAYP-RSDLKIESEKEDELYELQFGQFQKR 117
BLAST of NO05G02350 vs. NCBI_GenBank
Match: WP_041226527.1 (ferredoxin [Crinalium epipsammum]) HSP 1 Score: 74.7 bits (182), Expect = 3.600e-10 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 0 Query: 82 KSWEVKMTYLGETKVLTVCEDTPILEAA-LKEWDVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQYEKK 189 K + V++ + G T L V ED I+ AA D+P SC G+CTTCAGRII + E + G+S E + G+VL C +P L++E D +YE Q+GQ++K+ Sbjct: 3 KMYTVQIEHQGNTHTLQVPEDQIIIRAASAAGLDLPSSCNAGVCTTCAGRIIEGKVDQAEGM-GVSPELQEKGYVLLCVAYP-RSDLKIESEKEDELYELQFGQFQKR 108
BLAST of NO05G02350 vs. NCBI_GenBank
Match: WP_007353149.1 (MULTISPECIES: ferredoxin [Kamptonema] >CBN53922.1 ferredoxin (2Fe-2S) [[Oscillatoria] sp. PCC 6506]) HSP 1 Score: 73.6 bits (179), Expect = 8.100e-10 Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 0 Query: 82 KSWEVKM--TYLGETKVLTVCEDTPILEAALKEW-DVPCSCRNGICTTCAGRIIAMPGSKKEAIHGLSAEQSKNGFVLTCQTHPIGPGLEVELGMYDTVYESQYGQY 186 +S+ +K+ G+ + + V ED IL +A + D+P SCRNG CTTCA R++A + EA+ GLS E K G+ L C ++P +EVE D VYE Q+GQY Sbjct: 3 RSYSIKIYNRQTGDRRTVQVPEDRYILHSAENQGVDLPFSCRNGACTTCAVRLLAGEVHQPEAM-GLSVELQKQGYALLCVSYPC-CDIEVETQDEDEVYELQFGQY 107 The following BLAST results are available for this feature:
BLAST of NO05G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02350 ID=NO05G02350|Name=NO05G02350|organism=Nannochloropsis oceanica|type=gene|length=2214bpback to top protein sequence of NO05G02350.1 >NO05G02350.1-protein ID=NO05G02350.1-protein|Name=NO05G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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