NO05G02250, NO05G02250 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02250
Unique Name	NO05G02250
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1749
Alignment location	chr5:598358..600106 -

Link to JBrowse

Properties


Property Name	Value
Description	Mitochondrial 2-oxoglutarate malate carrier

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:598358..600106 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom
IPR018108	Mitochondrial_sb/sol_carrier
IPR002067	Mit_carrier

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Homology

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: EWM28157.1 (mitochondrial 2-oxoglutarate malate carrier [Nannochloropsis gaditana])

HSP 1 Score: 563.1 bits (1450), Expect = 5.300e-157
Identity = 277/317 (87.38%), Postives = 295/317 (93.06%), Query Frame = 0

Query:    1 MGEKQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKLEKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPDANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFVLAKPVPLAS 318
            M E + +LAETIQPF CGG SACFASSIIHPIDLAKVRLQLF+TLNPGVK P AVSVIVNLVK DG+ AAYAGLSASLMRQAIYGTARIGLHRTFSDKLEK+ GG+IPFWMKTLSGM SG IAVCIGTPFDVALVRMQADSMKP+ELRRNYKNVFDAIGRIF EEGP RLYAGLAPNVLRGMSMNVGMLACYDQAKDAIS HVTKD DPKKPS++TNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKP+A GKMPY+GLADCTL+IFR+EG+LAFWTGFPAYYGRCAPHAMIILLTIEQV K+YRS+F+  KP PL +
Sbjct:    1 MVESKHTLAETIQPFACGGLSACFASSIIHPIDLAKVRLQLFATLNPGVKRPSAVSVIVNLVKTDGITAAYAGLSASLMRQAIYGTARIGLHRTFSDKLEKSTGGSIPFWMKTLSGMASGAIAVCIGTPFDVALVRMQADSMKPLELRRNYKNVFDAIGRIFTEEGPMRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISAHVTKDPDPKKPSLLTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPNAQGKMPYSGLADCTLTIFRQEGILAFWTGFPAYYGRCAPHAMIILLTIEQVNKIYRSIFLSPKPAPLVA 317

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: CBN75896.1 (oxoglutarate/malate translocator [Ectocarpus siliculosus])

HSP 1 Score: 401.4 bits (1030), Expect = 2.700e-108
Identity = 200/301 (66.45%), Postives = 235/301 (78.07%), Query Frame = 0

Query:    8 LAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPDANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVF 308
            +A TIQPFVCGGA+ACFAS  IHPIDLAKVR+QL  ++ P  K P   +++ ++VK++G+++ YAGLSA++MRQAIYGTARIGLHRTFSDKL E+  G  IPFWMK LSGM SG I V IG P DVALV + +DSM P E RRNYK+V DA+ R   EEG   LYAGLAPN+LRGMSMNVGM+ACYDQAK  + + V  + DPK P +   L S+AVAGFT+A FSLPFDMLKSR+QD KPD+ G MPY GLADC   I RKEG LAFWTGF AYYGRCAPHAMIILL+IE +T  YR+VF
Sbjct:    3 VAATIQPFVCGGAAACFASCCIHPIDLAKVRIQLLGSMAPDTKKPSFPALLTHMVKSEGISSIYAGLSAAIMRQAIYGTARIGLHRTFSDKLQERNKGSEIPFWMKPLSGMSSGAIPVPIGPPMDVALVPIHSDSMNPKEERRNYKHVIDALRRCAAEEGVGSLYAGLAPNILRGMSMNVGMMACYDQAKSTM-MQVFGETDPKSPGLPVKLSSAAVAGFTAAAFSLPFDMLKSRLQDQKPDSKGNMPYKGLADCASGILRKEGPLAFWTGFTAYYGRCAPHAMIILLSIESITSAYRTVF 302

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: GAX28522.1 (solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11 [Fistulifera solaris])

HSP 1 Score: 372.5 bits (955), Expect = 1.300e-99
Identity = 186/307 (60.59%), Postives = 234/307 (76.22%), Query Frame = 0

Query:    4 KQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFV 309
            K +S+A+T+QPFVCGGA+A  AS +IHP+DLAKVR+QL+  LNPG   PG  +V+ NL++NDG  + Y G+ A++ RQ +YGTARIGLHR+FSDKL E   G  I F  KTLSGM SG IAVCIGTPFD+ALVR+Q+D M   + RRNYKNVFDA+ R  +EEG   LY GLAPNVLRGMSMNVGM+ACYDQAK+ ++  +  D   K PSV T L +SA+AGFT+A FSLPFD++KSR+   KPD   G MPY G+ DC++ IF+KEG + F++ F AYYGRCAPHAMIILL+IE +T  Y++ F+
Sbjct:   13 KSSSVAKTLQPFVCGGAAATCASVVIHPMDLAKVRMQLYGQLNPGKPVPGFTTVLGNLIQNDGFMSIYKGVDAAIGRQLVYGTARIGLHRSFSDKLVEWNHGQPINFLQKTLSGMASGSIAVCIGTPFDIALVRLQSDGMAEPKDRRNYKNVFDALFRTAKEEGVAALYKGLAPNVLRGMSMNVGMMACYDQAKEMVAA-LLNDPMTKGPSVPTQLGASAIAGFTAALFSLPFDLIKSRLMAQKPDPMTGVMPYKGVIDCSVQIFKKEGPMGFFSSFSAYYGRCAPHAMIILLSIESITNAYKNAFI 318

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: GAX15185.1 (solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11 [Fistulifera solaris])

HSP 1 Score: 370.9 bits (951), Expect = 3.900e-99
Identity = 186/307 (60.59%), Postives = 233/307 (75.90%), Query Frame = 0

Query:    4 KQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFV 309
            K  S+A+T+QPFVCGGA+A  AS +IHP+DLAKVR+QL+  LNPG   PG  +V+ NL++NDG  + Y G+ A++ RQ +YGTARIGLHR+FSDKL E   G  I F  KTLSGM SG IAVCIGTPFD+ALVR+Q+D M   + RRNYKNVFDA+ R  +EEG   LY GLAPNVLRGMSMNVGM+ACYDQAK+ ++  +  D   K PSV T L +SA+AGFT+A FSLPFD++KSR+   KPD   G MPY G+ DC++ IF+KEG + F++ F AYYGRCAPHAMIILL+IE +T  Y++ F+
Sbjct:    6 KSGSVAKTLQPFVCGGAAATCASVVIHPMDLAKVRMQLYGQLNPGKPVPGFTTVLGNLIQNDGFMSIYKGVDAAIGRQLVYGTARIGLHRSFSDKLVEWNHGQPINFLQKTLSGMASGSIAVCIGTPFDIALVRLQSDGMAEPKDRRNYKNVFDALFRTAKEEGVAALYKGLAPNVLRGMSMNVGMMACYDQAKEMVAA-LLHDPMTKGPSVPTQLGASAIAGFTAALFSLPFDLIKSRLMAQKPDPMTGVMPYKGVIDCSVQIFKKEGPMGFFSSFSAYYGRCAPHAMIILLSIESITNAYKNAFI 311

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: EJK53108.1 (hypothetical protein THAOC_27515 [Thalassiosira oceanica])

HSP 1 Score: 364.4 bits (934), Expect = 3.600e-97
Identity = 184/307 (59.93%), Postives = 232/307 (75.57%), Query Frame = 0

Query:    2 GEKQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSV 307
            GEK+ S  +  +PFVCGG++A FAS +IHP+DLAKVR+QLF  LNPG   PG  S++  +VKNDG+A+ Y G+ A++ RQ +YGTARIGLHR FS+KL E   G  I F MKTLSGM SG IAVCIGTPFD+ALVR+Q+DSM PV  R+NYKNVFDA+ R   EEG   LY GL PN+LRGMSMNVGMLACYDQAK+ ++  +  D     P++ T + +S VAGFT+A FS+PFD++KSR+   K D   GK+PY G+ADC + I +KEG + F++GF AYYGRCAPHAMIILL+IE +TK YR++
Sbjct:    3 GEKK-SFGKIAEPFVCGGSAATFASIVIHPMDLAKVRMQLFGQLNPGKPVPGFASILTTMVKNDGVASIYKGVDAAIGRQMVYGTARIGLHRAFSEKLKEMNDGKPISFPMKTLSGMASGSIAVCIGTPFDIALVRLQSDSMAPVAERKNYKNVFDALTRTATEEGAGALYKGLMPNILRGMSMNVGMLACYDQAKETVA-KLLNDPMIDGPALPTQIGASLVAGFTAAAFSMPFDLIKSRLMAQKADPVTGKLPYGGVADCAVQIAKKEGPIGFFSGFSAYYGRCAPHAMIILLSIESITKGYRNL 307

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: XP_002292890.1 (oxoglutarate/malate translocator [Thalassiosira pseudonana CCMP1335] >EED90086.1 oxoglutarate/malate translocator [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 364.4 bits (934), Expect = 3.600e-97
Identity = 179/307 (58.31%), Postives = 229/307 (74.59%), Query Frame = 0

Query:    7 SLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFVLAK 312
            S A+  +PFVCGG++A FAS +IHP+DLAKVR+QL+  LNPG   PG  +++ N+VKNDG+A+ Y G+ A++ RQ +YGTARIGLHR  SDK+ E   G  I F MKTLSGM+SG IAVCIGTPFD+ALVR+Q+DSM PV  R+NYKNVFDA+ R   EEG   LY GL PN+LRGMSMNVGMLACYDQAK+ +   +  D     P++ T + +S VAGFT+A FS+PFD++KSR+   K D    K+PY+G+ DC + + +KEG   F++GF AYYGRCAPHAMIILL+IE +T+ YR+V  L K
Sbjct:    6 SFAQIAEPFVCGGSAATFASIVIHPMDLAKVRMQLYGQLNPGKPVPGFTTLLTNMVKNDGIASVYKGVDAAIGRQLVYGTARIGLHRAISDKMKEMNEGKPISFLMKTLSGMMSGSIAVCIGTPFDIALVRLQSDSMAPVGERKNYKNVFDALTRTVSEEGAGALYKGLVPNILRGMSMNVGMLACYDQAKETVG-KLLNDPMVNGPALTTQVGASCVAGFTAALFSMPFDLIKSRLMAQKVDPVTNKLPYSGVMDCAMQVLKKEGPKGFYSGFSAYYGRCAPHAMIILLSIESITQGYRNVLGLQK 311

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: XP_002185141.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43273.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 359.8 bits (922), Expect = 8.900e-96
Identity = 183/303 (60.40%), Postives = 227/303 (74.92%), Query Frame = 0

Query:    7 SLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVF 308
            SLA+T++PFVCGG++A FAS IIHPIDLAKVR+QL+  LNPG   P   S+I ++V  DG  + Y G+ A++ RQ +YGTARIGLHRTFSDKL E   G  I F  KTLSGMLSG IAVCIGTPFD+ALVR+Q+D M   + RRNYKNVFDA+ R  +EEG   LY GL PN+LRGMSMNVGMLACYDQAK+ ++  +  D     PS+ T L +SA AGFT+A FSLPFD++KSR+  MKP+   G+MPY G+ DC + + + EG  +F++GF AYYGRCAPHAMIILL+IE +T +YR  F
Sbjct:   10 SLAKTLEPFVCGGSAATFASVIIHPIDLAKVRMQLYGQLNPGKPIPSFPSIIKSIVTRDGPLSVYKGVDAAIGRQMVYGTARIGLHRTFSDKLVELNDGKPISFLQKTLSGMLSGSIAVCIGTPFDIALVRLQSDGMAEPQDRRNYKNVFDALLRTSKEEGVGALYKGLLPNILRGMSMNVGMLACYDQAKEVVAA-LLNDPMTNGPSLPTRLGASATAGFTAALFSLPFDVMKSRLMAMKPNPLTGEMPYKGVVDCAVQMAKNEGPRSFFSGFSAYYGRCAPHAMIILLSIESITNLYRQTF 311

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: GBG27743.1 (Mitochondrial dicarboxylate/tricarboxylate transporter DTC [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 355.9 bits (912), Expect = 1.300e-94
Identity = 180/304 (59.21%), Postives = 229/304 (75.33%), Query Frame = 0

Query:   10 ETIQPFVCGGASACFASSIIHPIDLAKVRLQLF-STLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKLEK-TMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFVLA 311
            +T+QPFVCGG +AC  + ++ P+D  KV LQL    L PG K PGA+SV+ +++ ++G+   Y+GLSA+L RQA YGTARIGLHR+FS+KL++   G  IPFW KTLSG+ SG IAVCIGTPFDVALVRMQ+DS KP + RR Y  VFDA+ +I R EG   L++GLAPN+LRGMSMNVGMLA YD+AK AI V VTKD D    ++ T L ++AVAGF+ AF SLPFD++KSR+Q M+ D   GKMPY G+ DC   +  +EG  A WTGF AYYGRCAPHAM+ILL++EQ+T  YR++F L+
Sbjct:  704 KTVQPFVCGGLAACLGTCVVMPVDTTKVLLQLSGENLKPGEKKPGALSVVRSVIASEGIPGLYSGLSAALTRQATYGTARIGLHRSFSEKLQEINNGAEIPFWQKTLSGLTSGAIAVCIGTPFDVALVRMQSDSSKPRDQRRGYNGVFDALIKISRSEGVAGLWSGLAPNILRGMSMNVGMLAFYDEAKSAI-VQVTKDPD----ALSTRLGAAAVAGFSCAFLSLPFDLIKSRLQSMRVDPLTGKMPYKGVVDCGTKVIAREGFPALWTGFFAYYGRCAPHAMVILLSVEQITTTYRNIFGLS 1002

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: XP_009040235.1 (hypothetical protein AURANDRAFT_31501 [Aureococcus anophagefferens] >EGB05109.1 hypothetical protein AURANDRAFT_31501 [Aureococcus anophagefferens])

HSP 1 Score: 353.6 bits (906), Expect = 6.400e-94
Identity = 187/309 (60.52%), Postives = 224/309 (72.49%), Query Frame = 0

Query:    2 GEKQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKLEKTMGG-TIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAISVHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPDANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVFVL 310
            G    S AET+ PF C G +ACFAS +IHPIDLAKVRLQLF+T NPGV AP  VS+I  +VK +G A+ YAGLSASL+RQ+ YGTAR+GLHRTFSD+L++  GG  +PF  K  S ML G +AVC+GTP DVALVRMQADSMKP   RRNY NVF A+ RI  EE    LY GLAPN+LRGMSMN GM+AC DQAK+A +V +T D DP  PS+ T L+++   GF +A+ SLPFD+LKSR+QD K  A+       LA     +  KEG LAFWTGF AYY RCAPHAMIILLTI++V   Y++ F L
Sbjct:   14 GSSGPSTAETLMPFACSGFAACFASCVIHPIDLAKVRLQLFATQNPGVAAPNFVSMIGGMVKQEGFASIYAGLSASLLRQSTYGTARMGLHRTFSDELQRRNGGAALPFAQKAGSSMLGGALAVCVGTPMDVALVRMQADSMKPAAERRNYANVFSALRRIAVEESFGALYKGLAPNILRGMSMNCGMMACSDQAKEA-AVALTGD-DPADPSIKTRLIAAGAGGFFAAWLSLPFDLLKSRLQDAKAGAS-------LARTAGDVLAKEGPLAFWTGFAAYYSRCAPHAMIILLTIDEVKAKYKAYFQL 313

[Close]

BLAST of NO05G02250 vs. NCBI_GenBank
Match: OEU21594.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 310.5 bits (794), Expect = 6.200e-81
Identity = 153/304 (50.33%), Postives = 212/304 (69.74%), Query Frame = 0

Query:    7 SLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVKAPGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKL-EKTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRNYKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAIS-VHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPD-ANGKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVTKVYRSVF 308
            ++A+T++P+VCGG +A F S  IHP+DLAKVR+Q++  +NPG   PG  ++  N++ ++G+ + Y G+ A++ RQ +YGTARIGLH  FS  L EK  G  I F  K  SGMLSG IAV IG+PFD+ALVR+Q+D M     RRNYKNVFDA+ R  +EEG   LY G+APN+LRGMSMNVGM++C DQ ++  + +    D   K P++ T +L+S  AGFT+  FS+PFD++KSR+   +PD   G+MPY  + DC   I + +G + F+ GF AYY RCAPHAMI+LL+ + +TK YR+ F
Sbjct:    2 TVAKTLEPYVCGGTAATFGSCCIHPMDLAKVRMQIYGQINPGKPVPGFPTIFKNMIASEGMTSLYRGVDAAIGRQMVYGTARIGLHDKFSSMLVEKNQGQPISFAQKAASGMLSGAIAVSIGSPFDIALVRLQSDGMAKPADRRNYKNVFDALIRTAKEEGFGALYYGVAPNILRGMSMNVGMMSCNDQFQEMYAGLLGDPDFKTKGPNMTTRILASFSAGFTAGLFSMPFDLVKSRLMAQRPDPLTGEMPYKSIMDCITKIVKADGPIGFYNGFSAYYLRCAPHAMIVLLSKDSITKAYRNSF 305

The following BLAST results are available for this feature:

BLAST of NO05G02250 vs. NCBI_GenBank

BLAST of NO05G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28157.1	5.300e-157	87.38	mitochondrial 2-oxoglutarate malate carrier [Nanno...	[more]
CBN75896.1	2.700e-108	66.45	oxoglutarate/malate translocator [Ectocarpus silic...	[more]
GAX28522.1	1.300e-99	60.59	solute carrier family 25 (mitochondrial oxoglutara...	[more]
GAX15185.1	3.900e-99	60.59	solute carrier family 25 (mitochondrial oxoglutara...	[more]
EJK53108.1	3.600e-97	59.93	hypothetical protein THAOC_27515 [Thalassiosira oc...	[more]
XP_002292890.1	3.600e-97	58.31	oxoglutarate/malate translocator [Thalassiosira ps...	[more]
XP_002185141.1	8.900e-96	60.40	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
GBG27743.1	1.300e-94	59.21	Mitochondrial dicarboxylate/tricarboxylate transpo...	[more]
XP_009040235.1	6.400e-94	60.52	hypothetical protein AURANDRAFT_31501 [Aureococcus...	[more]
OEU21594.1	6.200e-81	50.33	mitochondrial carrier [Fragilariopsis cylindrus CC...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003641	NSK003641	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02250.1	NO05G02250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584245	gene_3027	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g149	gene2395	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02250.1	NO05G02250.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02250 ID=NO05G02250|Name=NO05G02250|organism=Nannochloropsis oceanica|type=gene|length=1749bp
TGCACGTATGCGATTCATTCGTGGAGAAGTTGGCTCTAGTCCTCGATCTT
ATTGTGTTACCACTGCCTTCTCAGCCCTTGCCCAATCATTGCAACCACCT
CCTCTTCCTCCTCATCCACGTGCCAGACCGCTCGACCCCGTCGACTCCCG
TATGCGTCGCCGCAAGTGCGGAAGTTTTTTTGGGGCAGTCCGCCTGCATT
CCTACTCCTCCTGATTCATCCTTGTCGTTTTTCCTCATACATTTGTCATC
CCTAAATTGTGCACAGGCCACCACACGACTCGCTCGCAGCAGCCCGCCAG
CCAGCAGCCATGGGTGAAAAGCAGACGAGCTTGGCTGAGACGATACAGCC
TTTTGTCTGTGGCGGCGCGAGTGCTTGTTTCGCCAGCAGCATCATCCATC
CCATCGACCTGGCGAAGGTGCGCCTCCAACTCTTCTCCACCCTCAACCCT
GGCGTAAAGGCACCAGGCGCAGTGAGTGTCATCGTTAACTTGGTCAAAAA
CGACGGGTTAGCGGCGGCCTATGCGGGTTTGAGTGCCTCGCTGATGAGGC
AAGCGATCTACGGCACGGCACGCATTGGCTTGCATCGGACCTTTTCGGAT
AAACTAGAGAAAACCATGGGTGGGACAATCCCCTTCTGGATGAAGACCTT
GAGCGGCATGTTGTCAGGCGGCATCGCCGTCTGCATCGGCACGCCCTTCG
ACGTCGCCCTGGTGCGCATGCAGGCTGACTCCATGAAGCCCGTAGAGCTG
CGCCGGAACTACAAGAACGTGTTTGACGCGATCGGACGCATCTTCAGGGA
GGAGGGGCCCAAACGGCTGTATGCGGGTTTGGCGCCCAATGTGCTGCGTG
GGATGTCCATGAACGTGGGTATGCTCGCGTGCTACGACCAGGCAAAGGAC
GCCATATCCGTGCACGTGACCAAGGACGCAGACCCAAAGAAGCCCTCCGT
CGTCACCAACCTCCTCTCCTCAGCCGTAGCCGGCTTCACCTCTGCCTTCT
TCTCTCTACCCTTCGACATGCTCAAATCCCGGATGCAGGACATGAAACCC
GACGCCAATGGCAAGATGCCCTACACGGGCCTGGCCGACTGTACGCTGTC
CATCTTCAGAAAAGAGGGCCTGCTCGCCTTCTGGACAGGCTTTCCCGCTT
ACTACGGCCGATGCGCACCCCACGCCATGATTATCTTGCTGACCATTGAG
CAGGTTACCAAAGTTTACCGTTCTGTCTTCGTGTTGGCGAAACCTGTGCC
CCTTGCCTCATAAGATGAGAGGAAGAGGGGGGCGGGGCACAGAAGCAGCA
TCGGGAGCAGTAGCAAGAGGCTTAGGTAGAGGCATGGAAGATAGATAGAA
GAAGGAGAAAAGGAGAGGCTGACGGCAAGGAAGGAAGGGGCCCAGACACC
AAATGAATGAATTATCCTGATCATGACTCCATTTCCCGGCCCTCTTCTTC
CGACGGGAAGTGTGGTGACCCACAGGCATAGAGGACATAGGTGGAGGGAA
GGAGATTGTGGGGTTTGGTTAGCTGCGTTATTTTTATACATCAAAACGCA
TGCACATTGTTCAGCCATGCGCTCGGATGCGACCAGGCGAGCAGGGCGGG
AGGGATAAAGGTCTCTTTATTGAAAGAGAGATAGTTGGTGAGCGGAAATG
ATTTACTGGCGCGAAACGAAATGTGCTGCGGTGTGACAGTTTTGGAGCAA
GGGGGGTACAATCCGTATCCATCGATAGAAGAAAAAATATAATGCATAA

protein sequence of NO05G02250.1

>NO05G02250.1-protein ID=NO05G02250.1-protein|Name=NO05G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp
MGEKQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVK
APGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKLE
KTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRN
YKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAIS
VHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPDAN
GKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVT
KVYRSVFVLAKPVPLAS*

Synonyms

Publications