NO05G02230, NO05G02230 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02230
Unique Name	NO05G02230
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2479
Alignment location	chr5:594430..596908 -

Link to JBrowse

Properties


Property Name	Value
Description	X-ray repair cross-complementing protein 6

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:594430..596908 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0043564	Ku70:Ku80 complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0042162	telomeric DNA binding
GO:0003684	damaged DNA binding
GO:0004003	ATP-dependent DNA helicase activity
GO:0003677	DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000723	telomere maintenance
GO:0006303	double-strand break repair via nonhomologous end joining
GO:0009987	cellular process

Vocabulary: **INTERPRO**
Term	Definition
IPR036361	SAP_dom_sf
IPR036465	vWFA_dom_sf
IPR016194	SPOC-like_C_dom
IPR006165	Ku70
IPR005161	Ku_N
IPR005160	Ku_C
IPR003034	SAP_dom
IPR006164	Ku70/Ku80_beta-barrel_dom

Homology

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: EWM28192.1 (x-ray repair cross-complementing protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 601.7 bits (1550), Expect = 2.800e-168
Identity = 334/648 (51.54%), Postives = 442/648 (68.21%), Query Frame = 0

Query:   20 KDFQTMEDNLMVLIDARPAMLAKNADGKSPLRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENG-GQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDS-SSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPNNPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELD-YIKADEEETESESKMVNVGSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVLLASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSD-ELLGRAEEELEELWELSPDPRKGVQRGRGRKRKADAVTKTVKG--KLVAEKVSKAEDEDDEKIGGGGDRSVKD--------LSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRL 654
            KDF  +EDNLMVLIDARP ML +N  G  PL  A  +   VL++KIM+++RD VG++LFG + AVD+K E  G G A  S     SQ+      ELQ LG+PTAKRIKQ+ERLC  D ++   L L+        ++S+ LRDG RACLRMLE +S+KE D RRIWL TNEDDPS+ N+PSQVIKDA+EGGV++ +WHFP  DGR+F+  K Y P+L+A ++  F  D Y  ADE++    +KM++ GSGD+ +LL  A+  LFKKRRY  T   ++  PP+S++VA YKTIQ C+KP PV+LAA +NRRL  STKW+CE+LVQY+D EL+ A GL+FG    T+P     +E   R    +PGL+LL F+P+EELAWELNVTSST +YPEE++LKGCTRAF ++R+AML++ +MA+VR   +A S PRLAVLLA  AT GLEL+ LPFL DLR++ESPHL+         Q EAA+ V++RL ++ ++Y  G++NP L+KFY+GLQALALE+++ +WNE  DD TWP + ELLGR  E +  LWE S DP K +  G   KRK+     TV G  +L++ K  K E +D  K   G   SVK          +   L+KLTV +LK++C+   L VSG+K D+IDRL
Sbjct:   21 KDFDVIEDNLMVLIDARPPMLVENVQGTVPLVTALGIIHHVLKRKIMINQRDHVGILLFGAE-AVDEKGEIVGSGNAKFSDMSRMSQVWGNQVHELQTLGQPTAKRIKQIERLCHEDTNIMNGLCLKHAQKLPGSSTSAALRDGLRACLRMLEGQSRKELDSRRIWLFTNEDDPSQVNDPSQVIKDAREGGVEMWVWHFPAQDGREFNRNKFYEPLLAAPTR--FVQDGYKIADEKDPGYCTKMIDAGSGDVNSLLLGARTPLFKKRRYVRTKLHISVDPPISLDVAFYKTIQRCRKPMPVKLAAVSNRRLATSTKWMCEDLVQYVDPELDVACGLEFGKGGVTIPLHSAAYEMKQRVCQRDPGLHLLAFLPAEELAWELNVTSSTLIYPEEMALKGCTRAFSAIRKAMLQQHKMALVRLHINAVSYPRLAVLLAPPATPGLELIVLPFLDDLRAIESPHLESLPALPSMDQKEAAKSVISRLAMRWEEYYQGYSNPGLQKFYAGLQALALEQSEVDWNESADDRTWPDEKELLGRTGEAMRGLWESSRDPDKVLNGGSSGKRKS-----TVAGVDRLLSLKKEKREVKDSGKAEKGHHDSVKSEFEAFEGAQTREGLSKLTVRKLKDLCQELKLHVSGRKDDLIDRL 660

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: XP_009521762.1 (hypothetical protein PHYSODRAFT_484094 [Phytophthora sojae] >EGZ26474.1 hypothetical protein PHYSODRAFT_484094 [Phytophthora sojae])

HSP 1 Score: 195.7 bits (496), Expect = 4.700e-46
Identity = 188/654 (28.75%), Postives = 298/654 (45.57%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNAD-GKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPNNP-----SQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESE-SKMVNVGSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKGVQRGRGRKRKADAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R  M     +AD  K+P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    ELQPLG P+A+RIK L+ L + DV    E  +  +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P    FD  K YG      S + F  D   A+EE  E+E S       G +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++ + A+ R  A   SEPRL  L         +  +   GL ++ LP+L D+R +               +++AA+ +++ L L     +  F NP L+K Y+ +QALAL+E   +++E   D+T P  E  G+ E+ +    E+     + +      KRK   VTK       A K    E  D E+           ++   + K T+PQLK    A GL   G+K D++D ++  +E
Sbjct:   28 KDALIVLLDVRKVMFTPYPHADEAKAPSTWFHAVVELVIKLLKSKVVANDNSQLSVVFFGTNKR---------GEAG---------TLE-QVYELQPLGYPSAQRIKDLQALLEADVQAEYE-SMENSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPQGPDGEEVGRIQKQVQNHTELKRTLNLFYITPPGKESFDLSKFYG-----CSFKDFSAD---ANEEVVENEASYQPAFPVGSLDDLMDGSLRKRFRKRRLTAFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLSSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKNKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGLNVIFLPYLDDIRDI----------PVDPEKIDAAKHLISTLKLTE---APSFENPELQKHYAAIQALALDEEVLQFDE-AKDTTLPDAEGFGQDEDAITAFREVCGG--ELIDASTNAKRK---VTK-------AGKPEAGETFDKEEWAA-------LVASNAIQKKTIPQLKAFLHAHGLAAVGRKADLVDAVKRFME 607

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: GAX99264.1 (ATP-dependent DNA helicase 2 subunit, putative [Pythium insidiosum])

HSP 1 Score: 193.7 bits (491), Expect = 1.800e-45
Identity = 184/665 (27.67%), Postives = 298/665 (44.81%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLAKNA---DGKSPLRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELH-LRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNED-----DPSEPNNPSQVIKDAQEGGVDVRLWHFPHPDGRD-FDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNVGSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYI---DLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWE-----LSPDPRKGVQRGRGRKRKADAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKD----------LSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRL 654
            +D L+VL+DAR +M  ++A   +  S      EL   + + K++ S    + VV FG  K  ++ S E                   H  E QPLG  +A+RIK+L+ L     D+ +ELH +R +D+ +F+++         C       S K++D +R+W+ TN+D     D  E       +++  E    + L++ P P GRD FD  + Y     A + + F      +    T             +  L+ ++  + F+KRR A     VT    +SI V LY      +K  PV L A+TN  L   TKWLC++   Y+   +++   AYG         V F R +         + PGL L+ F P   LAW  N+ +   VYP +  ++G   AF++L  AM KR++ A+ R      SEPRL  L         L  +   G  +V LP+L D+R ++S             Q++AA++++A+L L        F NP L+K Y+ +QALAL E + E++E + D+T P  E  G A+E++++  E       P     ++R   R  +   V + +    + EK         +K       +  D           S   + K TV +LK    A+G+ V+G+K D++ R+
Sbjct:   35 KDALIVLVDARESMFQRDAGAGESSSWFHAVVELLVRLSKSKVVASDNSLLSVVFFGSGKKTENSSLE-------------------HVYEFQPLGYASAQRIKELQALLDDARDLPRELHAMRNSDALAFSNA------LWHCGIAFSAASLKKKDSQRVWIFTNDDACVTPDADERGRVETQVRNHVELQRTLNLFYIP-PPGRDAFDLSRFY-----ACAFRDFANHEDDSPRASTAPAFLQPAFPVTSLDELMESSLRKRFRKRRLAAFPLHVT--ADVSIGVELYAMAVYQRKAPPVALDASTNAPLKSETKWLCDDTGAYLQADEIKTFVAYG------GKRVYFSRDDM--VQLKYYAAPGLQLICFKPMRSLAWNANIRAPYFVYPCDAFIEGSATAFVALLRAMRKRDKFALARLVVRKTSEPRLVALVPQEETYDELGQVQPTGFHVVFLPYLDDIRDIQSE----SDERATAEQVDAAKQLIAKLKLTELP---SFENPELQKHYASVQALALGEEQLEFDE-SKDTTQPDKE--GFAQEDVQQAIESFQEACGPMEESNLKRKVSRSTRRVVVCRGLTRGCLQEKTPARRAAPKKKPARDASAAADDTFDVDEWRVLASSAAIQKKTVAELKGFLTAQGIAVAGRKADLVARV 648

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: ETP34353.1 (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 190.7 bits (483), Expect = 1.500e-44
Identity = 183/662 (27.64%), Postives = 302/662 (45.62%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKG--VQRGRGRKRKA-------DAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +A  ++P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + D+    E  ++ +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P   +FD  K YG      S +         DEE  E E+          +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   G  ++ LP+L D+R V       P       +++AA++++++L L     +  F NP L+K Y+ +QALAL E   E++E   D+T P  +  G ++EE+++      D   G  +      KRK+           KT K K  +    +AE+  D+      +     ++   + K TV QLK    A GL   G+K ++ID ++  L+
Sbjct:   30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKR---------GEAGA---------LE-QVYEFQPLGFPSAQRIKDLQALLEADIQSEFE-SMQNSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYGCNFKDFSAE--------EDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDVPVD----PVMNVDQEKIKAAKQLISKLKLTE---APSFENPELQKHYAAIQALALNEEALEFDE-NKDTTLPDAD--GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSXXXXXXXXXXXKTAKAKAGSANKPEAEETFDK------NEWAALVASNAIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFLD 634

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: XP_002900728.1 (ATP-dependent DNA helicase 2 subunit, putative [Phytophthora infestans T30-4] >EEY59535.1 ATP-dependent DNA helicase 2 subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 190.3 bits (482), Expect = 2.000e-44
Identity = 180/657 (27.40%), Postives = 297/657 (45.21%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSP----DPRKGVQRGRGRKRKADAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +   K+P        EL   +L+ K++ S    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + DV  A+   ++ ++  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P    FD  K YG      S Q F  +    +EE   +E+        G +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL ++ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   GL ++ LP+L D+R + +             +++AA++++++L L     +  F NP L+K ++ +QALAL+E   E++E T D+T P  E  G+ E+ +    ++      D     +R  G   K +A     K +  A   S A                       + K TV QLK    A GL   G+K ++ID ++  +E
Sbjct:   29 KDALIVLLDVREAMFSPYPHMTAKAPSTWFHAIVELVIKLLKSKVVASDNSLLSVVFFGANKR---------GEAG---------TLE-QVYEFQPLGFPSAQRIKDLQALLETDVQ-AEFQSMQNSEKLSFSNA------LWQCGISFSDANLKKKDSQRIWVFTNDDSPEGPDAEEVGRIKKQVQNHTELKRTLNLFYITPPGKESFDLSKFYG-----CSFQDFSAE---ENEEIVGNEAFFQPAFPVGSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQIICFKPLSSLKWNENIRSPYFVYPSDGYIEGSSTAFMAILSSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGLNVIFLPYLDDIRDISA----------EPEKIDAAKQLISKLKLTE---APSFENPDLQKHFAAIQALALDEETLEFDE-TKDTTLPDAEGFGQDEDAITNFKDVCGGELLDVSTAAKRKAGSSNKPEAEETFDKNEWAALVASNA-----------------------IQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFME 607

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BLAST of NO05G02230 vs. NCBI_GenBank
Match: XP_008895900.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI36408.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL83337.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN18194.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO65172.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP06274.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 188.0 bits (476), Expect = 9.700e-44
Identity = 182/662 (27.49%), Postives = 301/662 (45.47%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKG--VQRGRGRKRKA-------DAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +A  ++P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + D+    E  ++ +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P   +FD  K YG      S +         DEE  E E+          +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   G  ++ LP+L D+R V       P       +++AA++++++L L     +  F NP L+K Y+ +QALAL E   E++E   D+T P  +  G ++EE+++      D   G  +      KRK+            T K K  +    +AE+  D+      +     ++   + K TV QLK    A GL   G+K ++ID ++  L+
Sbjct:   30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKR---------GEAGA---------LE-QVYEFQPLGFPSAQRIKDLQALLEADIQSEFE-SMQNSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYGCNFKDFSAE--------EDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDVPVD----PVMNVDQEKIKAAKQLISKLKLTE---APSFENPELQKHYAAIQALALNEEALEFDE-NKDTTLPDAD--GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSXXXXXXXXXXXXTAKAKAGSANKPEAEETFDK------NEWAALVASNVIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFLD 634

[Close]

BLAST of NO05G02230 vs. NCBI_GenBank
Match: ETK76682.1 (hypothetical protein, variant 1 [Phytophthora parasitica] >ETL30115.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 188.0 bits (476), Expect = 9.700e-44
Identity = 182/662 (27.49%), Postives = 301/662 (45.47%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKG--VQRGRGRKRKA-------DAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +A  ++P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + D+    E  ++ +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P   +FD  K YG      S +         DEE  E E+          +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   G  ++ LP+L D+R V       P       +++AA++++++L L     +  F NP L+K Y+ +QALAL E   E++E   D+T P  +  G ++EE+++      D   G  +      KRK+            T K K  +    +AE+  D+      +     ++   + K TV QLK    A GL   G+K ++ID ++  L+
Sbjct:   30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKR---------GEAGA---------LE-QVYEFQPLGFPSAQRIKDLQALLEADIQSEFE-SMQNSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYGCNFKDFSAE--------EDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDVPVD----PVMNVDQEKIKAAKQLISKLRLTE---APSFENPELQKHYAAIQALALNEEALEFDE-NKDTTLPDAD--GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSXXXXXXXXXXXXTAKAKAGSANKPEAEETFDK------NEWAALVASNVIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFLD 634

[Close]

BLAST of NO05G02230 vs. NCBI_GenBank
Match: KUF77147.1 (X-ray repair cross-complementing protein 5 [Phytophthora nicotianae])

HSP 1 Score: 188.0 bits (476), Expect = 9.700e-44
Identity = 182/662 (27.49%), Postives = 301/662 (45.47%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKG--VQRGRGRKRKA-------DAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +A  ++P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + D+    E  ++ +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P   +FD  K YG      S +         DEE  E E+          +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   G  ++ LP+L D+R V       P       +++AA++++++L L     +  F NP L+K Y+ +QALAL E   E++E   D+T P  +  G ++EE+++      D   G  +      KRK+            T K K  +    +AE+  D+      +     ++   + K TV QLK    A GL   G+K ++ID ++  L+
Sbjct:  393 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKR---------GEAGA---------LE-QVYEFQPLGFPSAQRIKDLQALLEADIQSEFE-SMQNSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYGCNFKDFSAE--------EDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDVPVD----PVMNVDQEKIKAAKQLISKLKLTE---APSFENPELQKHYAAIQALALNEEALEFDE-NKDTTLPDAD--GFSQEEVKDAITNFRDVCGGDLIDVSTAAKRKSXXXXXXXXXXXXTAKAKAGSANKPEAEETFDK------NEWAALVASNVIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFLD 997

[Close]

BLAST of NO05G02230 vs. NCBI_GenBank
Match: XP_008865484.1 (hypothetical protein H310_03420 [Aphanomyces invadans] >XP_008865485.1 hypothetical protein, variant 1 [Aphanomyces invadans] >ETW05707.1 hypothetical protein H310_03420 [Aphanomyces invadans] >ETW05708.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 186.4 bits (472), Expect = 2.800e-43
Identity = 180/653 (27.57%), Postives = 282/653 (43.19%), Query Frame = 0

Query:   27 DNLMVLIDARPAMLAKNAD-GKSPLRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPS-----EPNNPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNVGSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVLLA---------SLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWELSPDPRKGVQ-RGRGRKRKADAVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKD----LSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLET 660
            D L+VLID R ++   + D  K+  +   ++    L+ K++ +    +GV  FG  +  +  S +                   H  ELQ +G P+A+RIKQL  L  P  +  +E       S + T    L +    C         K++D + IW+LTN DDPS     E N   +  K+  E    + L+H P      FD    Y  +   AS             +  +  +K           ++  +  + ++KRR A   + +T +  LS+ V   +  Q   KP+PV L A TN  L   TKWLC     ++  +    Y L +G     V   + +     R      G+ LLGF P+  L    NV     ++P +  + G + AF++L  +M  ++++AV R+     S PR+A LLA          +   G +++ LPFL D+R + +P            Q++AA +V+  LTL        F NP L+K Y+ +QALAL+E    +++  DDST P  +  G A +++    E   +   G +      KRKA A  K  K      KV+K ED+D        D SV+      + G LAK TV +LK      GL  +GKK D++      L+T
Sbjct:   21 DALIVLIDVRRSIFDLSDDPSKTWFQTCIDMLVRYLKSKVIANDNSLLGVCFFGTKQVKNINSLD-------------------HVYELQEIGYPSARRIKQLTELVSPKFNFEREF-----GSMASTDQVSLSNALWHCSLAFANAGLKKQDTQTIWILTNSDDPSAGNADERNRIHEQFKNQLELHRTLNLFHMPPSSTSSFDLSSFYHTMFYDASN--------ATAPDTADGLAKQAAFAIHTYEDMMEESLRKRYRKRRLATLRFSITKTVKLSVEVYALRVRQ--MKPSPVHLDAETNVPLQSVTKWLCNHTGSFLTSDQINTY-LPYGGHR--VYLTKDDMVQIKR--FDAAGVQLLGFEPTSVLRLHENVRPPYFLFPTDEDIAGSSAAFVALHRSMTTKDKVAVCRFSMRDNSPPRVAALLAQDEVNDDQGQVQPMGFQVIFLPFLDDIRPLRAPQQQA-----TSTQVDAACQVIRSLTLSTMP---SFQNPELQKHYASIQALALDEDVLAFDD-KDDSTLP--DAAGFARKKVVAAVEAFKEACGGDELHKESVKRKAAAAPKREK-----NKVTKTEDDD-------VDCSVETYKTLAASGVLAKKTVVELKRFLSQHGLSTAGKKADLLATAMEFLQT 611

[Close]

BLAST of NO05G02230 vs. NCBI_GenBank
Match: ETP34352.1 (hypothetical protein F442_17286 [Phytophthora parasitica P10297])

HSP 1 Score: 180.6 bits (457), Expect = 1.500e-41
Identity = 183/685 (26.72%), Postives = 304/685 (44.38%), Query Frame = 0

Query:   26 EDNLMVLIDARPAMLA--KNADGKSP---LRIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMTFGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSSSFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPN-----NPSQVIKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKADEEETESESKMVNV-GSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSINVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAYGLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTSSTTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVL---------LASLATKGLELVELPFLGDLRSVESPHLDCPXXXXXXXQLEAARKVVARLTLKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLGRAEEELEELWE-------------LSPDPRKGVQRGR------------GRKRKAD-------AVTKTVKGKLVAEKVSKAEDEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDIIDRLQMDLE 659
            +D L+VL+D R AM +   +A  ++P        EL   +L+ K++ +    + VV FG +K          G+AG          LE    E QPLG P+A+RIK L+ L + D+    E  ++ +D  SF+++         C       + K++D +RIW+ TN+D P  P+        + +++  E    + L++   P   +FD  K YG      S +         DEE  E E+          +  L+  +  + F+KRR       +T    +SI V LY  +   +K TPV L A+TN  L   TKWLCE+   Y+  +    Y +D+G     V F R +           PGL L+ F P   L W  N+ S   VYP +  ++G + AF+++  +M+++++ A+ R  A   SEPRL  L         +  +   G  ++ LP+L D+R V       P       +++AA++++++L L     +  F NP L+K Y+ +QALAL E   E++E   D+T P  +  G ++EE++   +             + P  +  +   R              KRK+           KT K K  +    +AE+  D+      +     ++   + K TV QLK    A GL   G+K ++ID ++  L+
Sbjct:   30 KDALIVLLDVRKAMFSPYPHATAEAPSTWFHAVVELVIKLLKSKVVANDNSLLSVVFFGTNKR---------GEAGA---------LE-QVYEFQPLGFPSAQRIKDLQALLEADIQSEFE-SMQNSDKLSFSNA------LWQCGISFSNANLKKKDSQRIWIFTNDDSPEGPDAEEVGRIQKQVQNHTELKRTLNLFYITPPGKENFDLAKFYGCNFKDFSAE--------EDEENVEDEATFQPAFPVSSLDDLMDGSLRKRFRKRRLTTFPLHITKG--VSIGVELYALVVVQRKNTPVALDASTNTPLKTETKWLCEDTGAYLTPDQIKKY-IDYGGKR--VYFTRDDVVEIKH--YDAPGLQLICFKPLNSLKWNENIRSPYFVYPCDGYIEGSSTAFMAILNSMVRKQKFALARLIARKTSEPRLVALVPQEEENDEMGQVQPSGFNVIFLPYLDDIRDVPVD----PVMNVDQEKIKAAKQLISKLKLTE---APSFENPELQKHYAAIQALALNEEALEFDE-NKDTTLPDAD--GFSQEEVKVRRKRVLVRYPCGSSRFMIPPIQDAITNFRDVCGGDLIDVSTAAKRKSSXXXXXXXXXXKTAKAKAGSANKPEAEETFDK------NEWAALVASNAIQKKTVAQLKAFLHAHGLAAVGRKAELIDAVKSFLD 657

The following BLAST results are available for this feature:

BLAST of NO05G02230 vs. NCBI_GenBank

BLAST of NO05G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28192.1	2.800e-168	51.54	x-ray repair cross-complementing protein 6 [Nannoc...	[more]
XP_009521762.1	4.700e-46	28.75	hypothetical protein PHYSODRAFT_484094 [Phytophtho...	[more]
GAX99264.1	1.800e-45	27.67	ATP-dependent DNA helicase 2 subunit, putative [Py...	[more]
ETP34353.1	1.500e-44	27.64	hypothetical protein, variant 1 [Phytophthora para...	[more]
XP_002900728.1	2.000e-44	27.40	ATP-dependent DNA helicase 2 subunit, putative [Ph...	[more]
XP_008895900.1	9.700e-44	27.49	hypothetical protein, variant 1 [Phytophthora para...	[more]
ETK76682.1	9.700e-44	27.49	hypothetical protein, variant 1 [Phytophthora para...	[more]
KUF77147.1	9.700e-44	27.49	X-ray repair cross-complementing protein 5 [Phytop...	[more]
XP_008865484.1	2.800e-43	27.57	hypothetical protein H310_03420 [Aphanomyces invad...	[more]
ETP34352.1	1.500e-41	26.72	hypothetical protein F442_17286 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003643	NSK003643	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02230.1	NO05G02230.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|669835	gene_3025	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g147	gene2393	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02230.1	NO05G02230.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02230 ID=NO05G02230|Name=NO05G02230|organism=Nannochloropsis oceanica|type=gene|length=2479bp
ACACAGTTACACAAGTACAAGAGAAAACAAAGGCATTGCGGACGCATGTC
ACCGTACTACGAAGACGAAGAGGAAAGGGACGAGGAAGAGCAAGAGGTTA
TGAAGGACTTCCAGACGATGGAGGACAATTTGATGGTGCTGATTGATGCC
CGCCCAGCGATGCTGGCTAAGAACGCGGACGGTAAGgtacgtgctaatga
ggagagactgcagggcgaatgaggtggattggaagcggcatcaattgaac
acagcctgccggctagggaatgtcgcgcttctcatcacaaggagggtacg
cgaaaggggtggacctggctcatgggatctgttcatattacttgtgttca
tgccgctcgattttgcatatgtatatcccaccccttcccattttctccct
cttttccttcctctatctagTCCCCGCTAAGAATTGCTTTTGAACTGGCG
CAGTTCGTGCTGCGACAGAAGATTATGATGAGTCGTCGGGACTGGGTCGG
AGTTGTGCTTTTCGGGGTAGATAAGGCAGTGGATGATAAGTCGGAGGAAA
ATGGCGGCCAAGCAGGAGGTTCGATGACATTCGGCGCCAGCCAATTGCTT
GAGGGCCATACGACCGAGTTGCAACCCTTGGGGGAACCGACCGCCAAACG
CATCAAGCAACTGGAGCGGCTGTGCCAACCCGACGTCGATGTTGCCAAGG
AATTGCATTTAAGGTGGACAGACTCCTCCTCTTTTACCTCTTCATCCGGC
TTACGGGACGGGTTCCGAGCGTGTCTGCGGATGCTGGAGACCCGGTCCAA
AAAGGAACGGGACATTCGGCGCATCTGGCTTCTCACCAACGAGGACGACC
CCTCGGAGCCCAACAACCCAAGCCAAGTAATAAAAGATGCCCAAGAGGGA
GGGGTGGATGTACGCTTGTGGCATTTTCCTCATCCCGACGGCCGGGATTT
CGACGAGCGAAAGCTTTATGGGCCCGTGCTCTCCGCCGCGAGTAAGCAGC
CCTTCGAACTAGACTACATCAAGGCAGACGAGGAAGAGACCGAGTCCGAG
TCGAAGATGGTAAATGTCGGGAGCGGGGACATGACAACTCTGCTGGGGGC
AGCCAAGGGTCGACTATTTAAGAAGCGTCGCTACGCCTGCACCATCTGGC
AAGTTACTGACTCGCCTCCCCTCTCCATCAACGTTGCCCTTTACAAGACC
ATCCAACCCTGTAAAAAACCCACGCCCGTGCAGCTGGCCGCGGCTACAAA
TCGACGGCTAGTTCCGAGCACCAAGTGGCTATGTGAGGAGCTGGTGCAAT
ACATTGACTTGGAGCTGGAGGCAGCTTACGGCCTTGACTTCGGGTCCTCC
AACACCACCGTCCCCTTCAAACGCCCTGAGTTTGAATACACCCTCCGCGC
TGGTCTTAGCGAGCCCGGGCTCTATTTGCTGGGATTTGTGCCCTCTGAGG
AGCTGGCATGGGAGCTGAACGTGACGAGCAGCACGACGGTCTACCCAGAA
GAGCTCTCGCTCAAGGGTTGCACTCGTGCCTTCATCTCCCTGCGGGAGGC
GATGCTGAAGCGTGAGCGGATGGCAGTGGTCCGGTATCAGGCGTCGGCAA
AGTCAGAGCCTCGTCTAGCTGTGCTACTTGCTTCATTGGCAACCAAGGGT
TTAGAATTGGTTGAGTTGCCTTTCTTGGGCGATCTGCGTTCTGTGGAGAG
CCCGCATCTGGACTGTCCCCCGCCGCCGCCGGAGAAAGAACAGCTGGAGG
CAGCTAGGAAGGTGGTGGCGCGCTTGACTTTAAAGCCACAGCAGTACTCT
GTGGGCTTCAATAATCCGGCCTTGGAAAAGTTTTACTCGGGTTTGCAGGC
GTTGGCGCTGGAGGAGGCAAAGACGGAGTGGAATGAGATAACGGATGACA
GCACCTGGCCCTCGGACGAGTTGCTTGGCCGAGCAGAAGAAGAGTTGGAG
GAGCTGTGGGAACTGTCTCCTGATCCAAGAAAGGGTGTGCAGAGGGGGAG
GGGGAGGAAGCGGAAGGCAGATGCAGTGACGAAAACTGTTAAGGGTAAGC
TGGTCGCTGAGAAGGTCAGCAAGGCTGAAGACGAGGATGATGAGAAGATA
GGAGGCGGTGGCGATAGATCGGTGAAGGACCTTTCGATGGGAAAGCTGGC
CAAACTGACGGTTCCTCAACTGAAGGAGATCTGTCGTGCACGTGGGTTGC
CCGTGTCAGGCAAGAAGGGAGACATCATCGATCGTTTACAGATGGACCTC
GAGACCGATGATGACTTGTGATGAGACGAGGCAAGTGTTTCTGGTAGAGG
AATATTTTAAGAAGAGTATGTGAATATCATGTGGATATATGGACGATCAG
AACAAAACTAAAGAGTTGTGCAATAGAGAGACGAGGGGGAACCGGAGAAT
AAGGACCCCCGCCTTAGCGCAGCCTTTCAAACCCAGGACAGCGACAGTCA
CATAAAAGAAACATAACATATAAATAAAT

protein sequence of NO05G02230.1

>NO05G02230.1-protein ID=NO05G02230.1-protein|Name=NO05G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=664bp
MSPYYEDEEERDEEEQEVMKDFQTMEDNLMVLIDARPAMLAKNADGKSPL
RIAFELAQFVLRQKIMMSRRDWVGVVLFGVDKAVDDKSEENGGQAGGSMT
FGASQLLEGHTTELQPLGEPTAKRIKQLERLCQPDVDVAKELHLRWTDSS
SFTSSSGLRDGFRACLRMLETRSKKERDIRRIWLLTNEDDPSEPNNPSQV
IKDAQEGGVDVRLWHFPHPDGRDFDERKLYGPVLSAASKQPFELDYIKAD
EEETESESKMVNVGSGDMTTLLGAAKGRLFKKRRYACTIWQVTDSPPLSI
NVALYKTIQPCKKPTPVQLAAATNRRLVPSTKWLCEELVQYIDLELEAAY
GLDFGSSNTTVPFKRPEFEYTLRAGLSEPGLYLLGFVPSEELAWELNVTS
STTVYPEELSLKGCTRAFISLREAMLKRERMAVVRYQASAKSEPRLAVLL
ASLATKGLELVELPFLGDLRSVESPHLDCPPPPPEKEQLEAARKVVARLT
LKPQQYSVGFNNPALEKFYSGLQALALEEAKTEWNEITDDSTWPSDELLG
RAEEELEELWELSPDPRKGVQRGRGRKRKADAVTKTVKGKLVAEKVSKAE
DEDDEKIGGGGDRSVKDLSMGKLAKLTVPQLKEICRARGLPVSGKKGDII
DRLQMDLETDDDL*

Synonyms

Publications