NO05G02160, NO05G02160 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02160 vs. NCBI_GenBank
Match: EWM28255.1 (hypothetical protein Naga_100004g138 [Nannochloropsis gaditana]) HSP 1 Score: 431.8 bits (1109), Expect = 1.600e-117 Identity = 203/274 (74.09%), Postives = 234/274 (85.40%), Query Frame = 0
Query: 1 MKQFPAVRLLASLLESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNMQKQMRALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRLEVTFFYLQHIFLCTAPIFAVNKTHRLLYKSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGVHLALSALMQRMAKRK 275
M FP VRLLA+LLESLN EL FD+ DP+GDEYLSRWHSSP QHA E+++S LLF PLL AW+NM+KQ+RALRITYTPTK QVLWS+ L+MT +LQVPLKLDV + SHPAYFLQPCHVTT+LYF+CTVVP +SFICFHALSLLTWGPSLAFCFPN PAT LEV FF+LQH+ L +APIFA++K HR LY+SWSWNYFSF++LSAYHWWLLLPW I +GINVATMTSPPPAL PF R YR VQ AC +LH+LS+GVH ALS LM+ ++K K
Sbjct: 1 MHTFPLVRLLANLLESLNSELSFDSRDPEGDEYLSRWHSSPFQHAVEIVISVLLFGPLLLSAWKNMEKQVRALRITYTPTKLQVLWSYALLMTFVLQVPLKLDVKKLPSHPAYFLQPCHVTTVLYFVCTVVPCYSSFICFHALSLLTWGPSLAFCFPNYPATPLEVLFFHLQHLLLVSAPIFAISKVHRPLYRSWSWNYFSFLLLSAYHWWLLLPWGIYTGINVATMTSPPPALAPFKRYYRLVQAGACFILHTLSVGVHFALSCLMESLSKWK 274
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_005856365.1 (hypothetical protein NGA_2046900, partial [Nannochloropsis gaditana CCMP526] >EKU19992.1 hypothetical protein NGA_2046900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 297.4 bits (760), Expect = 4.700e-77 Identity = 140/186 (75.27%), Postives = 161/186 (86.56%), Query Frame = 0
Query: 1 MKQFPAVRLLASLLESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNMQKQMRALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRLEVTFFYLQHIFLCTAPIFAVNK 187
M FP VRLLA+LLESLN EL FD+ DP+GDEYLSRWHSSP QHA E+++S LLF PLL AW+NM+KQ+RALRITYTPTK QVLWS+ L+MT +LQVPLKLDV + SHPAYFLQPCHVTT+LYF+CTVVP +SFICFHALSLLTWGPSLAFCFPN PAT LEV FF+LQH+ L +APIFA++K
Sbjct: 11 MHTFPLVRLLANLLESLNSELSFDSRDPEGDEYLSRWHSSPFQHAVEIVISVLLFGPLLLSAWKNMEKQVRALRITYTPTKLQVLWSYALLMTFVLQVPLKLDVKKLPSHPAYFLQPCHVTTVLYFVCTVVPCYSSFICFHALSLLTWGPSLAFCFPNYPATPLEVLFFHLQHLLLVSAPIFAISK 196
BLAST of NO05G02160 vs. NCBI_GenBank
Match: CBN77465.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 166.8 bits (421), Expect = 9.700e-38 Identity = 89/249 (35.74%), Postives = 135/249 (54.22%), Query Frame = 0
Query: 33 YLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNMQKQMRALRI-----TYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRLEVTFFYLQHIFLCTAPIFAVNKTHRLLYKSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGVHLALSALMQRMAKRKGA 277
++S+W+ SP QH E+ +S L+ SPL+Y+ ++ + ++R R P+ LW L+ + LK + SHPAY QPCHV +++ +C V +E S + H + L WGP LAF P+LP +E+ F+ QH + AP + R LY+ + WN FV L+ YHWW L P + +G+NVATM+ PP +L FG+ YR V GL C +L ++GV L+ + +M A
Sbjct: 119 FISQWYLSPRQHVVEMALSILVLSPLVYLYFKLCRARLRLKRAAGAFDAKRPSLLMKLWGAALLGLVGAGAFLKFTKQELISHPAYLWQPCHVHSLVMGLCAFVETEGSLLVMHVATTLWWGPFLAFVAPSLPTDPVEIAIFWAQHALMLLAPFLRLTVGTRWLYRDFWWNSVGFVFLTCYHWWWLAPVNLFTGVNVATMSVPPDSLEMFGKYYRPVWGLICGLLQLAAVGVMCVLARVFGQMPSSTAA 367
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_008867135.1 (hypothetical protein H310_04528 [Aphanomyces invadans] >ETW04179.1 hypothetical protein H310_04528 [Aphanomyces invadans]) HSP 1 Score: 95.5 bits (236), Expect = 2.700e-16 Identity = 78/268 (29.10%), Postives = 117/268 (43.66%), Query Frame = 0
Query: 14 LESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNM--QKQMRALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLP--ATRLEVTFFYLQHIFLCTAPIFAVNKTHRLLY-KSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGVHLALSALMQRMAKRKGA 277
L +LNP +P E+ + W +P QHA E + LL+ + Y +ALR PT + F L T + S AY LQPCHV T I +V+P + F + LTW +A FP+L + ++ ++ +H + PI A+++ R Y +W + + YH L A+ + +NVATM SPP L G YR VQ C VLH + G+ +A +L+ + K A
Sbjct: 23 LIALNPHIPV--------EFRTEWFLTPKQHALETLAFSLLYGSIAYYCHCRAINSDAWKALRPVRVPTTVDAM-CFVLAGTSYAAAYYYKHIAPGSWRVAYMLQPCHVLTATIAILSVLPGRWANYIFQVMVTLTWSSVVAMAFPDLSDYTHKGDMFNYWYEHALILVLPI-ALSRCGRFTYLGNWHFIVLGYATTGLYHCVCLQIAALATNVNVATMASPPQILAHLGVYYRAVQYAICFVLHLVYNGIIVAGCSLLSAATQPKAA 280
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_008867136.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETW04180.1 hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 90.5 bits (223), Expect = 8.800e-15 Identity = 76/275 (27.64%), Postives = 114/275 (41.45%), Query Frame = 0
Query: 14 LESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYV---------AWRNMQKQMRALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLP--ATRLEVTFFYLQHIFLCTAPIFAVNKTHRLLY-KSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGVHLALSALMQRMAKRKGA 277
L +LNP +P E+ + W +P QHA E + LL+ + Y AW K +R +R Y W AY LQPCHV T I +V+P + F + LTW +A FP+L + ++ ++ +H + PI A+++ R Y +W + + YH L A+ + +NVATM SPP L G YR VQ C VLH + G+ +A +L+ + K A
Sbjct: 23 LIALNPHIPV--------EFRTEWFLTPKQHALETLAFSLLYGSIAYYCHCRAINSDAW----KALRPVRAYYYKHIAPGSW-----------------------RVAYMLQPCHVLTATIAILSVLPGRWANYIFQVMVTLTWSSVVAMAFPDLSDYTHKGDMFNYWYEHALILVLPI-ALSRCGRFTYLGNWHFIVLGYATTGLYHCVCLQIAALATNVNVATMASPPQILAHLGVYYRAVQYAICFVLHLVYNGIIVAGCSLLSAATQPKAA 261
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_008614968.1 (hypothetical protein SDRG_10741 [Saprolegnia diclina VS20] >EQC31569.1 hypothetical protein SDRG_10741 [Saprolegnia diclina VS20]) HSP 1 Score: 89.4 bits (220), Expect = 2.000e-14 Identity = 76/258 (29.46%), Postives = 119/258 (46.12%), Query Frame = 0
Query: 7 VRLLASLLESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPL-LYVAWRNMQKQM-RALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRL--EVTFFYLQHIFLCTAPIFAVNKTHRLLY-KSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGV 260
V ++A + + P+ +++ D++ S+W+ SP QHA E + + PL +Y +Q M RA R T + G ++ + V K + P Y LQPCH T+L + TV +T+ + F ++W LA FP++ + ++ +HI + P F + T R Y S SW F F ++ YH +L + + INVAT+ +PP L G YR Q L C LH L GV
Sbjct: 7 VDVIADIFAQIGPQHNTPSNELVPDKFRSKWYLSPWQHAFEFVCYMSILIPLSIYSYQCAIQHPMWRAQRPVRKATPLDLALGVGTGVSYIAIVYYKALAPGMWRLP-YALQPCHTLTLLLTLLTVARGKTANLLFQVYVTMSWSSVLALSFPDMSDYEHWGDCFNYFYEHIMMLLVP-FVLWHTGRFDYIGSPSWIMFGFTFIALYHAAILQIVVLVTEINVATLMTPPAILKDIGIYYRPAQYLICFTLHWLYNGV 262
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_009827994.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV82325.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 88.2 bits (217), Expect = 4.400e-14 Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = 0
Query: 17 LNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNMQKQ--MRALRITYTPTKGQVLW-SFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNL-PATRLEVTF-FYLQHIFLCTAPIFAVNKTHRLLY-KSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLH 254
LNP +P +E+ + W +P QHA E I L++ + + K +AL+ PT V W F L + + S AY LQPCHV T I +V+P + F + LTW +A FP+L T + F ++ +H + PI +++T R + +W + + YH L A+ + +NVATM SPP L G YR VQ + C VLH
Sbjct: 26 LNPHIP--------EEFRTEWFLTPKQHAVETIAFGFLYASIAWFCHSRAVKSEAWKALQPARAPT--AVDWVCFVLATSSYAAAYYYKHIAPGSWRVAYMLQPCHVLTAWIAILSVLPGRWANYIFQVMVTLTWSSVVAMAFPDLSDYTHVGDMFNYWYEHALILVLPI-VLSRTGRFTFLGNWHFIVLGYATTGLYHCVCLQVAALATNVNVATMASPPAILAHLGVYYRAVQYVMCFVLH 257
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_012205464.1 (hypothetical protein SPRG_11263 [Saprolegnia parasitica CBS 223.65] >KDO23831.1 hypothetical protein SPRG_11263 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 87.8 bits (216), Expect = 5.700e-14 Identity = 72/258 (27.91%), Postives = 116/258 (44.96%), Query Frame = 0
Query: 7 VRLLASLLESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWR--NMQKQMRALRITYTPTKGQVLWSFGLIMTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRL--EVTFFYLQHIFLCTAPIFAVNKTHRLLY-KSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVLHSLSIGV 260
V ++A + + P+ +++ D++ S+W+ SP QHA E + + PL ++ +A R T + G ++ + V K + P Y LQPCH T+L + TV +T+ + F ++W LA FP++ + ++ +HI + P F + T R Y S SW F F ++ YH +L + + INVAT+ +PP L G YR Q L C LH L GV
Sbjct: 7 VDVIADIFAQIGPQHNTPSNELVPDKFRSKWYLSPWQHAFEFVCYMSILVPLSIYSYHCATQHPMWKAQRPVRKATTLDMTLGVGTGVSYVAIVYYKALAPGMWRLP-YALQPCHTLTLLLTLLTVARGKTANLLFQVYVTMSWSSVLALSFPDMSDYEHWGDCFNYFYEHIMMLLVP-FLLWHTGRFDYIGSPSWIMFGFTFIALYHAAILQIVVLVTEINVATLMTPPAILKDIGIYYRPAQYLICFALHWLYNGV 262
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_004349922.1 (hypothetical protein CAOG_01402 [Capsaspora owczarzaki ATCC 30864] >KJE90021.1 hypothetical protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 86.3 bits (212), Expect = 1.700e-13 Identity = 71/257 (27.63%), Postives = 117/257 (45.53%), Query Frame = 0
Query: 10 LASLLESLNPELPFDASDPKGDEYLSRWHSSPTQHAAELIVSFLLFSPLLYVAWRNMQKQMRALRITYTPTKGQVLWSFGLI-----MTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSET--SFICFHALSLLTWGPSLAFCFPNLP--ATRLEVTFFYLQHIFLCTAPIFAVNKTH----RLLYKSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALI-PFGRCYRFVQGLACLVL 253
+A L SL+P LP A + WH SP QHA E ++ +LF+ +++A + + + T P + W L+ + +L+ + + H + LQPCH+ ++L + P ++ + FH WG LA FP+ LE+ FF +QH+ L P+ V + + +S F+F V + YH ++L A+ +G N+ + SPP ++ FG YR V CLVL
Sbjct: 19 IAKHLHSLHPNLPSIAD--RVTSVQGSWHLSPKQHAIEFVIYNILFALAVWLAAKRLPNWSTLVSETTVPLSSRG-WFPRLLDALCTVAMLVFYGSAIYYKTVRGHLLFLLQPCHIFSVLLLLLCFWPEKSLKRHVLFHIHIHCLWGALLALVFPDFRDYGMYLEIHFFIMQHLALVIVPLVWVYTGRFPLVSMYGRGFSVTIFAFFVHALYHSFVLASLALYTGNNLNYLMSPPTGILESFGSFYRPVMYAFCLVL 272
BLAST of NO05G02160 vs. NCBI_GenBank
Match: XP_008867134.1 (hypothetical protein H310_04527 [Aphanomyces invadans] >ETW04178.1 hypothetical protein H310_04527 [Aphanomyces invadans]) HSP 1 Score: 85.9 bits (211), Expect = 2.200e-13 Identity = 73/244 (29.92%), Postives = 104/244 (42.62%), Query Frame = 0
Query: 35 SRWHSSPTQHAAELIVSFLLFSPLLYVA---------WRNMQKQMRALRITYTPTKGQVLWSFGLI-MTLLLQVPLKLDVTNISSHPAYFLQPCHVTTILYFICTVVPSETSFICFHALSLLTWGPSLAFCFPNLPATRL--EVTFFYLQHIFLCTAPIFAVNKTHRLLYKSWSWNYFSFVVLSAYHWWLLLPWAIKSGINVATMTSPPPALIPFGRCYRFVQGLACLVL---HSLSIGVHLAL 264
S W+ SP QHA E IV +F+P+ Y A W+N Q+ +RA PT W G++ M+ L V + Y QPCHV T I + + F +TW A FP+ ++ FY++H + P+ S SW F F V++ YH +L + + +N+AT+ SPP L G YR Q C VL H+LSI +AL
Sbjct: 34 SVWYLSPRQHALETIVYVTVFAPMCYYAVKQALKHPKWKN-QRPIRA------PTAFD--WVLGVVTMSSFLGVCYYKAHSTNGWRLLYMFQPCHVMTFSLAILCIARGRAANFIFQVYVAMTWSSDCALIFPDTSDYIYIGDIYNFYIEHYLMLIIPVLLCLSGRYEYIGSPSWILFGFTVIALYHAIVLQLACLVTEVNIATLMSPPSVLRSLGEWYRPAQYGMCFVLHWVHNLSISGAVAL 268 The following BLAST results are available for this feature:
BLAST of NO05G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02160 ID=NO05G02160|Name=NO05G02160|organism=Nannochloropsis oceanica|type=gene|length=831bpback to top protein sequence of NO05G02160.1 >NO05G02160.1-protein ID=NO05G02160.1-protein|Name=NO05G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
|