NO05G02150, NO05G02150 (gene) Nannochloropsis oceanica

Overview
NameNO05G02150
Unique NameNO05G02150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1198
Alignment locationchr5:577231..578428 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:577231..578428 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G02150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02150.1NO05G02150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02150.1NO05G02150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02150 ID=NO05G02150|Name=NO05G02150|organism=Nannochloropsis oceanica|type=gene|length=1198bp
ATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGAGGAGTCGGGGC
GGCCGGAGCGGCAACAGGAGGAGGAGGAGAGGGAAAAAGCGGAATCCCCA
CTATACTCTCTTTACCCGGAGAACAGGCAGCACGAGCACTAGCAACCATT
GGTGCGGCACTTACTGGAGGAATGGAGAAGGGAAAGAGAAAGATAGTGAG
GCTGCTCCGACGAGGGGGAAGAGGGGGAGGAGGAGGGGAAAGAGGGGCAG
GAGGGGGAGGAGGAGGGGAAAGAGGGGCAGGAGGACGAGGTAAAGAAGGG
GGAGGGGAAGGAGGGGGAGGAGGAGGGGAAAGAGGGGCAGGAGGACGAGG
GGAAGGAGGGGGAGGAGGGGAAAGAGGGGGAGGAGGACGAGAAGGAGGAG
GAGAAGAAGAGGAGGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAAGGA
GGAGAGGAAGAAgtaaaagagaaagaagaggaagaagaggaagaagaaga
aaaagaagaggaagaagaagaagaggaggaagaggaagaagAAGAAGGGG
GAGGAGGAGGAGGGGGAGGAGGAGGGAGACGAGGAGGGGGTGGAAGGGGA
AGGGGAGGAGGAGGAGGAGGCGGTGGAGGCGGAGGCGGAGGCGGGGGAGG
CGGAGGCGGAGGAGGATGCGGAGGCGGAGGAGGAGGAGGAGGAAGGGAAA
GGGGAGGAGGAGGCGGAGGCGGTGGAAGCAGAGGAGGCGGAGGCGGTGGA
AGCAGAGGAGGAGGCGGTGGAAGCAGAGGAGGAGGCGGTGGAAGCAGAGG
AGGAGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAG
GAGAACGAGGACGAGGCAGAGGAGGAGGTCATGGGCGGGCCATCCGAGGA
CTGTATTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGGACGGCAATGG
GGCACGTAACATCCTGCGGGTGTACAGGAGTATGGTCCGTGGAGAAGCTC
GTCCCCATGATCTTCGGTTTGGTCAACCGCGGCAAGATATGCGAACACTC
TATGTGTAGCGTTCCCGCTGACCTCCTCTTTTATCCTCCTCCCCCTTCTC
CTCCTGGCCCTGTGTGGGCCGTCCGGGGACTTTGCCAGGTCAAAAAACCT
GTCAAAGTCGCTAGAAAAACTCGGACGATGAATAAGGGATGGCAATAA
back to top

protein sequence of NO05G02150.1

>NO05G02150.1-protein ID=NO05G02150.1-protein|Name=NO05G02150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MDTGGDPGRVGVGGVGAAGAATGGGGEGKSGIPTILSLPGEQAARALATI
GAALTGGMEKGKRKIVRLLRRGGRGGGGGERGAGGGGGGERGAGGRGKEG
GGEGGGGGGERGAGGRGEGGGGGERGGGGREGGGEEEEEEEEEEEEEEEG
GEEEKKGEEEEGEEEGDEEGVEGEGEEEEEAVEAEAEAGEAEAEEDAEAE
EEEEEGKGEEEAEAVEAEEAEAVEAEEEAVEAEEEAVEAEEEEAEAEEAE
AEEAEAEENEDEAEEEVMGGPSEDCIGVTPVNSSCPGTAMGHVTSCGCTG
VWSVEKLVPMIFGLVNRGKICEHSMCSVPADLLFYPPPPSPPGPVWAVRG
LCQVKKPVKVARKTRTMNKGWQ*
back to top
Synonyms
Publications