NO05G02130, NO05G02130 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G02130 vs. NCBI_GenBank
Match: EWM28195.1 (ferredoxin [Nannochloropsis gaditana]) HSP 1 Score: 239.2 bits (609), Expect = 8.800e-60 Identity = 121/161 (75.16%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 1 MTTMLRLSVLLVLLSMVASFLVPAPLPAMTSVPQQTRRGKMMMLGMFGKKSAGG--KTFTVTVQQKFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
M +LR ++ +V+++ +F VP +T+ Q R G M MLGMFGKKSAGG KTFTVTVQQKFYK+AELEV+AGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCA+QII GAKNLNPKSPVEVKALGGK+GDDIRL+CCTRASGDV +KTKP
Sbjct: 1 MRGILRFAITMVMITTTVAFFVPV---LLTTHKQSRRVGVMTMLGMFGKKSAGGNKKTFTVTVQQKFYKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
BLAST of NO05G02130 vs. NCBI_GenBank
Match: CBN76658.1 (ferredoxin [Ectocarpus siliculosus]) HSP 1 Score: 111.7 bits (278), Expect = 2.100e-21 Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 0
Query: 9 VLLVLLSMVASFLVPAPLPAMTSVPQQTRRGKMMMLGMFGKKSAGGKTFTVTVQQKF-YKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALG-GKRGDDIRLSCCTRASGDVVIKTKP 160
++L + +++ V AP ++ +V +Q+ G QQK +K+ EL + NLRK LM NKIDIYPLQGKIYNCGGGG CGTCAV + +GA+N +PK P E K L KR RLSCCT SG V ++TKP
Sbjct: 10 IVLAAVLQISNGFVVAPSSSL-NVRRQSHSGMXXXXXXXXXXXXXXXXXXXXXQQKTGFKETELTL--AGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159
BLAST of NO05G02130 vs. NCBI_GenBank
Match: XP_005535584.1 (unknown [2Fe-2S] ferredoxin [Cyanidioschyzon merolae strain 10D] >BAM79298.1 unknown [2Fe-2S] ferredoxin [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 99.8 bits (247), Expect = 8.400e-18 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 0
Query: 59 VTVQQKFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRG-DDIRLSCCTRASGDVVIKTKP 160
VTV +K + + ++A NLRK L++NKID+Y L+GK+ NCGGGGQCGTC V I G N NP+ E + K+ D RLSCCT+ G + ++TKP
Sbjct: 90 VTVYEKGKSEPRV-LEAPVGSNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_006620154.1 (MULTISPECIES: iron ABC transporter substrate-binding protein [Arthrospira] >EDZ93670.1 ferredoxin [Arthrospira maxima CS-328] >BAI90159.1 probable 2Fe-2S ferredoxin [Arthrospira platensis NIES-39] >CCE20850.1 Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005] >EKD10921.1 ferredoxin [Arthrospira platensis C1] >CDM93456.1 Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005] >KDR55691.1 iron ABC transporter substrate-binding protein [Arthrospira platensis str. Paraca] >AMW28279.1 iron ABC transporter substrate-binding protein [Arthrospira platensis YZ]) HSP 1 Score: 99.0 bits (245), Expect = 1.400e-17 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 0
Query: 72 EVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
EV A NLR + M+N+ID+Y L+GK+ NCGG GQCGTC V+++ G +NL+PK+PVE + L K+ D RL+C T +G V ++TKP
Sbjct: 12 EVIAADGANLRLKAMENQIDLYTLKGKLLNCGGYGQCGTCIVEVVEGMENLSPKTPVEERML-KKKPDTYRLACQTTVNGPVSVRTKP 98
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_096381240.1 (iron ABC transporter substrate-binding protein [Stanieria sp. NIES-3757] >BAU63453.1 ferredoxin [Stanieria sp. NIES-3757]) HSP 1 Score: 97.8 bits (242), Expect = 3.200e-17 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 64 KFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
KF K+ + E+ A NLR++ ++N IDIY L+GK+ NCGG GQCGTC V+I+ G ++L+PK+P E + L ++ D RL+C T +G++ +KTKP
Sbjct: 5 KFVKE-DKEIIAANGANLREKALQNGIDIYTLRGKLVNCGGYGQCGTCIVEIVEGMEHLSPKTPFEARKL-KRKPDSYRLACQTLVNGEISVKTKP 98
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_015145091.1 (ferredoxin [Pleurocapsa minor] >AFY78792.1 ferredoxin [Pleurocapsa sp. PCC 7327]) HSP 1 Score: 97.4 bits (241), Expect = 4.200e-17 Identity = 47/96 (48.96%), Postives = 68/96 (70.83%), Query Frame = 0
Query: 64 KFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
+F K+ E EV A NLR++ ++N+IDIY L+GK+ NCGG GQCGTC V+I+ G +NL+PK+ E++ L K+ + RL+C T +G V +KTKP
Sbjct: 5 RFVKE-EKEVIAADGANLREKALQNRIDIYTLKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFELRKL-KKKPESYRLACQTLVNGPVKVKTKP 98
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_024545606.1 (MULTISPECIES: iron ABC transporter substrate-binding protein [Synechococcus] >BAW96656.1 putative ferredoxin [Synechococcus sp. NIES-970]) HSP 1 Score: 97.4 bits (241), Expect = 4.200e-17 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 66 YKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
Y A +V A NLR++ ++N +D+Y GK+ NCGG GQCGTC V+II G +NL+PK+P E + L ++ RL+C T A GDVV+KTKP
Sbjct: 6 YVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEIIEGMENLSPKTPFEERRL-KRKPPSYRLACQTLAHGDVVVKTKP 98
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_039727861.1 (iron ABC transporter substrate-binding protein [Lyngbya confervoides] >KIF15661.1 iron ABC transporter substrate-binding protein [Aphanocapsa montana BDHKU210001] >KIF40583.1 iron ABC transporter substrate-binding protein [Lyngbya confervoides BDU141951]) HSP 1 Score: 97.4 bits (241), Expect = 4.200e-17 Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 0
Query: 66 YKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
+ + + EV A NLR + M+N IDIY L GK+ NCGG GQCGTC V+I G++NL+P++ VE + L KR ++ RL+C T +GD+ +KTKP
Sbjct: 6 FLNEDKEVIAADGANLRYKAMENDIDIYTLVGKMMNCGGYGQCGTCVVEITEGSENLSPRTQVEERKL-RKRPENCRLACQTLVNGDITVKTKP 98
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_036477598.1 (iron ABC transporter substrate-binding protein [Myxosarcina sp. GI1]) HSP 1 Score: 97.1 bits (240), Expect = 5.400e-17 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 58 TVT-VQQKFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
T+T V+ K K+ EV A NLR++ ++N +DIY L+GK+ NCGG GQC TC V I+ G +NL+P++ E K L GK+ D RLSC T G + ++TKP
Sbjct: 3 TITFVKDKNGKEVITEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRL-GKKPDSYRLSCQTVVKGPITVRTKP 104
BLAST of NO05G02130 vs. NCBI_GenBank
Match: WP_071104556.1 (iron ABC transporter substrate-binding protein [Moorea producens] >AOY81207.1 iron ABC transporter substrate-binding protein [Moorea producens JHB]) HSP 1 Score: 97.1 bits (240), Expect = 5.400e-17 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 0
Query: 64 KFYKDAELEVDAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAVQIISGAKNLNPKSPVEVKALGGKRGDDIRLSCCTRASGDVVIKTKP 160
KF K+ + EV A NLR+++++N+ID+Y +GK+ NCGG GQCGTC V+I++G +NL+P++ VE + L K+ D+ RL+C +G V +KTKP
Sbjct: 5 KFVKE-DQEVIAANGANLREKMLQNRIDLYTFRGKLVNCGGYGQCGTCIVEIVAGIENLSPRTEVENRKL-KKKPDNYRLACQVLVNGPVTVKTKP 98 The following BLAST results are available for this feature:
BLAST of NO05G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G02130 ID=NO05G02130|Name=NO05G02130|organism=Nannochloropsis oceanica|type=gene|length=2340bpback to top protein sequence of NO05G02130.1 >NO05G02130.1-protein ID=NO05G02130.1-protein|Name=NO05G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=160bpback to top Synonyms
Publications
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