NO05G02040, NO05G02040 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G02040
Unique Name	NO05G02040
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2106
Alignment location	chr5:549346..551451 -

Link to JBrowse

Properties


Property Name	Value
Description	Armadillo-like helical

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:549346..551451 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0006606	protein import into nucleus

Vocabulary: **Cellular Component**
Term	Definition
GO:0005623	cell

Homology

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BLAST of NO05G02040 vs. NCBI_GenBank
Match: EWM28298.1 (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 766.5 bits (1978), Expect = 7.000e-218
Identity = 415/724 (57.32%), Postives = 508/724 (70.17%), Query Frame = 0

Query:    1 MDFSSSSKAASCLVKRLQQAGTSSSL--LLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIARMAPAPALSPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCTLPAVGTDAYVHFQAQLWASVDSQLVRRATETRPTNLGALRDIPLDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSNDWLDKAVYAAAAHTNRYVREAAMKMVHVLVEH--CFSDTNE--ELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQM---AGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATAR------GKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRP---GGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRLSEEERGLYLRHASFSSSLLYPSAVA-----VGEVVPAAMRQSRPSVVGM 702
            MDFSSS KAASCLVKRL+Q  T S L  LLP AQLLSS L+AKP+F+  DV+ P++ L+     +  RW+CLCV LLV NDAIA  APAPA+SP +R  + ++IA HLEHDEPRVR LVAKTLGLLCTLP+VGTDAY  F  QLWASVD+ + RR TETR   LG  ++I +DDV+GWR+LETSL+AL+ VVE CGPEL+R+ LL+  +WL+K V+ AA H+NRYVREAAM M  V+V+   C SD+    +++    LA V A GLADAWPQVV+AA  ATRSLL  A        ED+F  LLPPLCQ RYY PEGVQV AQETW  LFA A       G AGSGRE VARYV EMV+ HC A+ HGRSHF +VAACYALKEL  K++ +V  PFA ++L  +LPCL   HWE+RSAG V  AQL + FP +V+ + E  V +CF  LEDESWSIREE+AW LAA+ R+ GE+  +Q  L  RL  +L+A R QPV+T+EEQL+ +ND QAHTG P  GCCGG +   A+ +          S  RY AQPWEVSEGALY+F ELC++D+ P         FA+ YLP+LAELG L+HF  ADRLRQSLWR+LP   ++LGK  L+R+L+LFTPAL  ALASP  SPLTRH A+ C+ EL RQ+GPS F+GRLSE ER LY RH    SS   P  +A      G ++P+ +  S+P VV +
Sbjct:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILM--TLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTP-EWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRY-GEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSS---PHGIARASRSDGGLIPSLL-LSQPEVVSI 716

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: XP_005856366.1 (hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526] >EKU19993.1 hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 542.0 bits (1395), Expect = 2.800e-150
Identity = 290/486 (59.67%), Postives = 350/486 (72.02%), Query Frame = 0

Query:    1 MDFSSSSKAASCLVKRLQQAGTSSSL--LLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIARMAPAPALSPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCTLPAVGTDAYVHFQAQLWASVDSQLVRRATETRPTNLGALRDIPLDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSNDWLDKAVYAAAAHTNRYVREAAMKMVHVLVEH--CFSDTNE--ELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQM---AGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATAR------GKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARL 472
            MDFSSS KAASCLVKRL+Q  T S L  LLP AQLLSS L+AKP+F+  DV+ P++ L+     +  RW+CLCV LLV NDAIA  APAPA+SP +R  + ++IA HLEHDEPRVR LVAKTLGLLCTLP+VGTDAY  F  QLWASVD+ + RR TETR   LG  ++I +DDV+GWR+LETSL+AL+ VVE CGPEL+R+ LL+  +WL+K V+ AA H+NRYVREAAM M  V+V+   C SD+    +++    LA V A GLADAWPQVV+AA  ATRSLL  A        ED+F  LLPPLCQ RYY PEGVQV AQETW  LFA A       G AGSGRE VARYV EMV+ HC A+ HGRSHF +VAACYALKEL  K++ +V  PFA ++L  +LPCL   HWE+RSAG V  AQL + FP +V+ + E  V +CF  LEDESWSIREE+AW LAA+ R+ GE+  +Q  L  RL
Sbjct:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILM--TLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTP-EWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKGKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRY-GEKTKMQQCLITRL 482

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: CBJ31868.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 303.9 bits (777), Expect = 1.300e-78
Identity = 213/675 (31.56%), Postives = 334/675 (49.48%), Query Frame = 0

Query:    1 MDFSSSSKAASCLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIARMAPAPALSPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLL------CTLPAVGTDAYVHFQAQLWASVDSQLVRRATETRPTNLGALRDIPLDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSNDWLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC--FSDTN-----EELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRLSEEER 663
            MDFSS+  A    ++ L++  T+S  L   A+ L          + +D +   Q +L     E   W+ + VG L+    +       ALSP+   +L +   +HLEH EPRVR LVA TLG L       +    G  AY  F+ +L  ++ S+   R TET    +    ++ +DD +GW+ALETS LAL+  V+  G   +  G L +++ +   V  A  H NR+VREA+ +++  +++ C   S +N     ++L    + A   A G+ D W QV +AA+ A RSLL A   A  E  +  LLP +C +RYY+ +GV++ +QETW             GRE V +Y  ++ +Y+C A +   +H  R +AC+++ E+A K+  + +    +R+L  +L C  D  W VR A CV   +    +P       EK+    F  +                              +++A +  +L   + Q  ++ E+  + +ND +AHTG     C  G +A        G SD   + P    ++PWE S+GA+YL RELC  +   G        T+   LA++ RL HF  AD LR+++W+ LP   + +GK+V KRHL++F   L D L+    S L RH A  C+ +LS+ IGPSIF GRL++ +R
Sbjct:    1 MDFSSTHAA----LRSLKRRPTTSDALKNLAEKLEGPFAGDGKGLGDDTQDVEQDVLELLGTE--EWEGVSVGFLLAKSLVDN--KGQALSPSFLRSLLAHCDQHLEHAEPRVRSLVASTLGALTRADDESSSGCTGLAAYEFFRKRLSGAI-SKNFERTTETITDVISGAENVAVDDTSGWKALETSFLALKEFVDAVGRPFIDGGHL-NDETVGYIVSGATVHINRHVREASYQIIRSILDACGTLSGSNAPQQGDKL--AHTFAEACAVGMQDNWSQVRYAASVANRSLLKALSPADREQFYPRLLPRMCLNRYYLADGVKLFSQETWRMFMGE------EGREMVGKYAQDVTDYYCMA-SELDNHCVRESACHSIAEMAEKVAPQYLATHVDRLLKALLVCFFDESWPVRDAACVASGRFAGAYPEECRPSLEKLYERWFRHV--GXXXXXXXXXXXXXXXXXXXXXXXXXYDKVSAWVTENLPRAKQQGAESAEQHRRKHNDAKAHTGNQVFSC--GSLAPKLRKG--GCSDCQVTRP----SEPWEFSDGAVYLVRELCFANPEVG-------VTFFEELADVARLTHFVQADCLRETIWKQLPAMGEAVGKNVFKRHLDVFLKPLFDTLSRITTSQLARHAAASCVRQLSKFIGPSIFRGRLTDSQR 639

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BLAST of NO05G02040 vs. NCBI_GenBank
Match: XP_008914036.1 (hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310] >ETN00715.1 hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310])

HSP 1 Score: 268.5 bits (685), Expect = 6.000e-68
Identity = 207/704 (29.40%), Postives = 330/704 (46.88%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCT----------LPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L             P +  D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S LT+  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHEFTPQI-VDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQG--TSRLTKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: ETK73649.1 (hypothetical protein L915_19421 [Phytophthora parasitica])

HSP 1 Score: 266.9 bits (681), Expect = 1.700e-67
Identity = 206/704 (29.26%), Postives = 329/704 (46.73%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCT----------LPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L             P +  D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S L +  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHEFTPQI-VDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMVCEALGKKVFKRYLELFFDPLVFTLQG--TSRLAKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: KUF83451.1 (hypothetical protein AM587_10010391 [Phytophthora nicotianae] >KUF97223.1 rRNA-processing protein FCF1 [Phytophthora nicotianae])

HSP 1 Score: 266.9 bits (681), Expect = 1.700e-67
Identity = 206/703 (29.30%), Postives = 328/703 (46.66%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLC---------TLPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L           L     D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S L +  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHELTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQG--TSRLAKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: ETI33328.1 (hypothetical protein F443_19978 [Phytophthora parasitica P1569])

HSP 1 Score: 266.5 bits (680), Expect = 2.300e-67
Identity = 206/704 (29.26%), Postives = 329/704 (46.73%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCT----------LPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L             P +  D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S L +  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHEFTPQI-VDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQG--TSRLAKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: ETL27089.1 (hypothetical protein L916_19319 [Phytophthora parasitica] >ETL80323.1 hypothetical protein L917_19152 [Phytophthora parasitica] >ETM33568.1 hypothetical protein L914_19194 [Phytophthora parasitica] >ETO62076.1 hypothetical protein F444_19970 [Phytophthora parasitica P1976] >ETP03164.1 hypothetical protein F441_19838 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 266.5 bits (680), Expect = 2.300e-67
Identity = 206/704 (29.26%), Postives = 329/704 (46.73%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCT----------LPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L             P +  D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S L +  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHEFTPQI-VDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQG--TSRLAKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: ETP31334.1 (hypothetical protein F442_19782 [Phytophthora parasitica P10297])

HSP 1 Score: 266.2 bits (679), Expect = 3.000e-67
Identity = 206/704 (29.26%), Postives = 329/704 (46.73%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAPAL-----------SPAIRETLYSIIARHLEHDEPRVRGLVAKTLGLLCT----------LPAVGTDAYV-------HFQAQLWASVDSQLVRRATETRPTNLGALRDIP-----LDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRL 658
            C  K L ++ T +S + P+A               + ++  +QTLLL   +  +RW+ + V L+V  D ++R               P PAL              + +T+   I +H+E+ EPRVR  VAK LG+L             P +  D+ V        F+   +  +D  +      T P +       P     LDDV+GW+ALE+SL AL+ +++G G + +++    + D          L+     +  H NR+VR   +  + VL +     F +T++  +   +L      G+ D W QV +AA+ + R+ L   Q  G +    +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++   +   L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELC+  V P       A  YLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     S L +  A  C+ ++S+QIGPSIFLGRL
Sbjct:   35 CPSKTLSESPTQTSDVSPSAD---------EETRRDLLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHEFTPQI-VDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLETHQSTVS-DTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEKGRDAYLPILLPRLCLNRYYIAERVQKYSQESWRMIM------GDQGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCS--VAP-----EHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQG--TSRLAKFAARDCVAQISKQIGPSIFLGRL 690

[Close]

BLAST of NO05G02040 vs. NCBI_GenBank
Match: XP_002897220.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65357.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 265.8 bits (678), Expect = 3.900e-67
Identity = 217/745 (29.13%), Postives = 342/745 (45.91%), Query Frame = 0

Query:   12 CLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVEAPVQTLLLGASNEAKRWDCLCVGLLVCNDAIAR-------------MAPAP-------ALSPA----IRETLYSIIARHLEHDEPRVRGLVAKTLGLLCTLPAVGTDAYVHFQAQLWASVDSQLVRRATETRPTNLGALRD------------------------IPLDDVTGWRALETSLLALQAVVEGCGPELVRQGLLSSND---------WLDKAVYAAAAHTNRYVREAAMKMVHVLVEHC---FSDTNEELLPLPSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLCQSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYAVTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWEVRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVLAALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHTGRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFRELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDAMQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGPSIFLGRLS-----EEERGLYLRHASFSSSLLYPSAVAVGEVVPAAM 692
            C  K L ++ T +S + P+A               E ++  +QTLLL   +  +RW+ + V L+V  D ++R               P+P       +++P     + +T+   + +H+E+ EPRVR  VAK LG+L             F  Q+  SV S L  R+ +   T    L D                          LDDV+GW+ALE+SL AL+ +++G G E +++      D          L+     +  H NR+VR   +  + VL +     F + ++  +   +L      G+ D W QV +AA+ + RS L   Q  G      +LLP LC +RYY+ E VQ ++QE+W  +          GRE VA+Y  E+V+Y+        SH  R +AC  + EL  K++   ++P   R++  +L C  D    VR A C+  AQL   FP       +++  L    L D+ WS+RE+AA  L  ++R  G+E     ++       L   + QP  T++E  ++    + H  +    CC     +P     H H D           +PWE ++GA+Y+ RELCA  V P       A TYLP +A++  L+HF     L++++W+ LP   + LGK V KR+LELF   L+  L     + L +  A  C+ ++S+QIGPSIFLGRL      +E  G  +   S+  ++   SA  V E +  A+
Sbjct: 1384 CPSKILSESPTQTSDVAPSAD---------EETKREQLQEELQTLLL---HGKERWEPVAVFLVVVRDLLSRYLDLSDLDANTDFSVPSPDLPLYVSSIAPLSDVFVTQTVKQAVHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTQ--EFTPQIVDSVVSNL-SRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVEFLKEQTTGDGDEAFVYLTPQILELVATKSCFHINRHVRVVGLDTITVLSDIAPVGFLEAHQTAVG-DTLNKCIKRGMEDNWCQVRYAASISARSFLLKLQEQGRAAYLPILLPRLCLNRYYIAERVQKYSQESWRMIVGE------QGRELVAKYATEIVDYY----VEMTSHCVRESACQCIAELGMKVDPTAIRPHVGRLMQALLICFYDVSNLVRDAACLASAQLVRGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQE--ALDRVVKVTEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS---LEPKLFERHEHRD----------KEPWEHTDGAIYMVRELCA--VAPD-----VAVTYLPQVADVAILRHFPQTAVLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQG--TNRLAKFAARDCVAQISKQIGPSIFLGRLDANPTWKEALGPVVPVQSYMINVSIASASRVREGILVAL 2078

The following BLAST results are available for this feature:

BLAST of NO05G02040 vs. NCBI_GenBank

BLAST of NO05G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28298.1	7.000e-218	57.32	Armadillo-like helical [Nannochloropsis gaditana]	[more]
XP_005856366.1	2.800e-150	59.67	hypothetical protein NGA_2093200, partial [Nannoch...	[more]
CBJ31868.1	1.300e-78	31.56	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_008914036.1	6.000e-68	29.40	hypothetical protein PPTG_17908 [Phytophthora para...	[more]
ETK73649.1	1.700e-67	29.26	hypothetical protein L915_19421 [Phytophthora para...	[more]
KUF83451.1	1.700e-67	29.30	hypothetical protein AM587_10010391 [Phytophthora ...	[more]
ETI33328.1	2.300e-67	29.26	hypothetical protein F443_19978 [Phytophthora para...	[more]
ETL27089.1	2.300e-67	29.26	hypothetical protein L916_19319 [Phytophthora para...	[more]
ETP31334.1	3.000e-67	29.26	hypothetical protein F442_19782 [Phytophthora para...	[more]
XP_002897220.1	3.900e-67	29.13	conserved hypothetical protein [Phytophthora infes...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003659	NSK003659	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G02040.1	NO05G02040.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_100004g128	gene2379	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G02040.1	NO05G02040.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G02040 ID=NO05G02040|Name=NO05G02040|organism=Nannochloropsis oceanica|type=gene|length=2106bp
ATGGACTTTTCATCGTCCTCGAAGGCGGCCAGCTGCCTGGTCAAGCGCCT
ACAGCAAGCGGGAACGTCTTCCTCCCTGCTCCTGCCGGCCGCTCAACTCC
TGTCTTCGACGCTCATGGCCAAGCCTAGCTTCATGCCCGAGGACGTCGAG
GCACCGGTACAGACCCTTTTGCTTGGCGCATCAAATGAGGCCAAGCGATG
GGACTGTTTGTGCGTAGGACTCTTGGTGTGCAACGATGCCATAGCTCGCA
TGGCCCCCGCCCCGGCACTGTCGCCCGCCATTCGAGAGACGCTTTATTCA
ATCATTGCCCGGCACTTGGAACATGACGAACCGCGTGTGCGCGGCCTGGT
GGCAAAGACTTTGGGCTTGCTTTGCACTTTGCCGGCCGTGGGCACGGACG
CGTATGTGCATTTCCAGGCCCAGTTGTGGGCGAGCGTCGATTCACAACTT
GTCCGGCGCGCCACCGAGACGCGACCGACGAACCTGGGTGCGCTGAGGGA
CATTCCCTTGGACGATGTGACGGGCTGGCGAGCGCTTGAAACATCGCTTT
TGGCATTGCAGGCGGTGGTGGAAGGTTGCGGGCCTGAGTTGGTGCGGCAA
GGATTGCTCTCTTCTAATGACTGGCTGGACAAAGCCGTCTACGCGGCAGC
TGCCCACACCAATCGTTACGTTCGTGAAGCTGCAATGAAGATGGTGCATG
TCCTCGTGGAGCATTGCTTCAGTGACACCAACGAAGAGTTGCTGCCGCTG
CCATCGCTGGCTGTGGTGGCTGCGGAGGGCTTGGCTGATGCCTGGCCTCA
GGTCGTGCATGCTGCTGCTTGTGCCACGCGTAGCCTTTTGGCTGCCGCGC
AAATGGCAGGGAATGAAGACATATTTGATGTGTTGTTACCGCCATTGTGT
CAGAGTCGGTATTATGTTCCGGAGGGGGTTCAAGTGCATGCACAGGAGAC
GTGGGTGGCTTTGTTTGCCACTGCGCGAGGGAAGGCGGGAAGTGGACGGG
AAACAGTAGCGAGGTATGTGGGGGAGATGGTGGAGTATCACTGCTATGCT
GTTACTCACGGCCGTAGTCACTTTGCGAGGGTTGCGGCGTGTTATGCTTT
GAAGGAGTTGGCGGCAAAGTTGGAAGGGGAGGTGGTGCAGCCGTTTGCAG
AGCGGATGCTGGCGACCGTGCTTCCGTGTTTGGAGGACCATCATTGGGAG
GTGCGGTCGGCGGGTTGTGTAACACTGGCGCAGTTGTTTGAAAACTTTCC
GGGGATGGTGGTGGGGAAGGAGGAAAAGGTGGTGGGGTTGTGTTTTGCCC
GGTTGGAGGATGAGTCGTGGTCGATCCGGGAAGAGGCTGCGTGGGTTCTG
GCCGCGCTTGTTCGATTTGGTGGGGAAGAAAATGGGATACAAAGTCAGTT
AGCGGCCCGGTTGATGACTTCATTGGAGGCGGTGCGTGCCCAGCCGGTTC
AGACGAAGGAGGAGCAGCTGAAGCTTTACAATGATCCGCAGGCGCACACC
GGACGACCTACCCTTGGGTGCTGTGGGGGAGAGGTAGCGCAGCCGGCTTC
TGCTGCAGTCCATGGCCACTCGGACACTCCCTCCTCGTCGCCTTGCCGTT
ACAAGGCGCAACCGTGGGAGGTTTCGGAGGGGGCTTTGTACCTTTTCCGA
GAGCTGTGTGCCGAGGACGTGCGCCCGGGCGGGAAGGAGGGTGTATTTGC
GGAGACTTACCTACCTATGTTAGCTGAGCTTGGGCGCCTGCAGCACTTTG
CAGATGCCGACCGCTTGCGTCAGAGCCTATGGCGGGTCTTACCTGATGCG
ATGCAGAAATTGGGAAAGTCAGTTCTGAAGCGGCATCTAGAGCTGTTCAC
CCCTGCCTTGCTCGATGCTTTGGCTTCCCCGTTGGTTAGCCCGCTGACCC
GTCACAACGCTGTCAAGTGCCTGGAGGAATTGAGCCGACAGATTGGACCT
TCTATTTTCCTTGGGCGGCTTTCAGAGGAGGAGCGGGGGCTCTACCTGCG
TCATGCTTCCTTTTCCTCTTCCTTGTTATATCCGTCAGCAGTTGCTGTTG
GTGAGGTGGTGCCTGCGGCGATGCGGCAGTCTCGACCGAGCGTTGTGGGC
ATGTGA

protein sequence of NO05G02040.1

>NO05G02040.1-protein ID=NO05G02040.1-protein|Name=NO05G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp
MDFSSSSKAASCLVKRLQQAGTSSSLLLPAAQLLSSTLMAKPSFMPEDVE
APVQTLLLGASNEAKRWDCLCVGLLVCNDAIARMAPAPALSPAIRETLYS
IIARHLEHDEPRVRGLVAKTLGLLCTLPAVGTDAYVHFQAQLWASVDSQL
VRRATETRPTNLGALRDIPLDDVTGWRALETSLLALQAVVEGCGPELVRQ
GLLSSNDWLDKAVYAAAAHTNRYVREAAMKMVHVLVEHCFSDTNEELLPL
PSLAVVAAEGLADAWPQVVHAAACATRSLLAAAQMAGNEDIFDVLLPPLC
QSRYYVPEGVQVHAQETWVALFATARGKAGSGRETVARYVGEMVEYHCYA
VTHGRSHFARVAACYALKELAAKLEGEVVQPFAERMLATVLPCLEDHHWE
VRSAGCVTLAQLFENFPGMVVGKEEKVVGLCFARLEDESWSIREEAAWVL
AALVRFGGEENGIQSQLAARLMTSLEAVRAQPVQTKEEQLKLYNDPQAHT
GRPTLGCCGGEVAQPASAAVHGHSDTPSSSPCRYKAQPWEVSEGALYLFR
ELCAEDVRPGGKEGVFAETYLPMLAELGRLQHFADADRLRQSLWRVLPDA
MQKLGKSVLKRHLELFTPALLDALASPLVSPLTRHNAVKCLEELSRQIGP
SIFLGRLSEEERGLYLRHASFSSSLLYPSAVAVGEVVPAAMRQSRPSVVG
M*

Synonyms

Publications