NO05G01980, NO05G01980 (gene) Nannochloropsis oceanica

Overview
NameNO05G01980
Unique NameNO05G01980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2310
Alignment locationchr5:538355..540664 +

Link to JBrowse

Properties
Property NameValue
DescriptionArp1 actin-related protein 1 centractin beta
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:538355..540664 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005869dynactin complex
GO:0005856cytoskeleton
Vocabulary: INTERPRO
TermDefinition
IPR029909Arp1
IPR004000Actin
Homology
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: EWM28289.1 (arp1 actin-related protein 1 centractin beta [Nannochloropsis gaditana])

HSP 1 Score: 496.9 bits (1278), Expect = 4.000e-137
Identity = 233/273 (85.35%), Postives = 259/273 (94.87%), Query Frame = 0 
Query:    1 MEGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            MEGI+NQPIVIDNGTG LKAGFAGGDRPRV+FSSAVGRPKHVR+MPGGALEG D+CVG KLQEHRGAFRWSYPMEHG+VVDWQ+ME+VWGH+YSRD+LNVPSE+HPVLLTEAPLNPL NREKA+EVLFE+FNVPA+F+APQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAI+RTDVAGRDVTD LQLLLRRSG  L TSAEK++VRQIKEEKCY+SF+PRKEEE PP  D ++LPDG  +++G+ERFRAPEILF+PELIGSEEKG
Sbjct:    1 MEGISNQPIVIDNGTGTLKAGFAGGDRPRVVFSSAVGRPKHVRIMPGGALEGVDLCVGKKLQEHRGAFRWSYPMEHGVVVDWQEMEQVWGHLYSRDNLNVPSEDHPVLLTEAPLNPLVNREKASEVLFESFNVPAIFLAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAISRTDVAGRDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDTFRLPDGTHILMGSERFRAPEILFQPELIGSEEKG 273
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_024585297.1 (alpha-centractin [Plasmopara halstedii] >CEG48928.1 alpha-centractin [Plasmopara halstedii])

HSP 1 Score: 392.9 bits (1008), Expect = 8.200e-106
Identity = 187/291 (64.26%), Postives = 225/291 (77.32%), Query Frame = 0 
Query:    6 NQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE-----------------------TPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            NQP+VIDNG+G++KAGFAGG+ P+V+F S VG  KH RMMPGGA EG DV VG+++Q+HRG F+  Y MEHG++ DW  M R+W H+YS+D LNV SE+HPVLLTEAPLNP+ NR++A EV FETFNVP+LF++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAITR D+AGRDVT  LQLLLRR+G N QTSAE+EVVR+IKE+ CYV+FNP KEE+                       +     AY LPDG  L +G ERFRAPE+LFRPE+IGSE +G
Sbjct:    8 NQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQQHRGLFKIQYAMEHGVITDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFETFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVTHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKLALAVKDMLSAKSEPSTTSGDSTSAYFLPDGTLLNIGPERFRAPEVLFRPEIIGSEARG 298
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: CBN74860.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 392.1 bits (1006), Expect = 1.400e-105
Identity = 185/273 (67.77%), Postives = 220/273 (80.59%), Query Frame = 0 
Query:    1 MEGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            M  + NQP+VIDNGTGI+KAGFAG D+P+V+F+S VGRPKH R M GGAL+G DV +G K++EHRG FR ++PMEHG+V +W DME+VW H+Y RD+LNV  E+H VLLTEAPLNP  NR + AE  FETF VPA+F APQAILSLYASGRTTGVVLDSGDGV+H VPVYEGFA+ HAITR DVAGRDVT++LQLLLRR+G +L TSAE EVVRQ+KE+ CYV+FNP  EE+       Y+LPDG  + VG ER+RAPE LF PE +GSE  G
Sbjct:    1 MSAVLNQPVVIDNGTGIIKAGFAGADKPKVVFASHVGRPKHKRAMIGGALDGGDVFLGKKVEEHRGVFRLTHPMEHGVVKNWADMEKVWSHVYGRDNLNVGPEDHAVLLTEAPLNPYKNRRQCAETFFETFGVPAMFCAPQAILSLYASGRTTGVVLDSGDGVTHCVPVYEGFAVRHAITRIDVAGRDVTERLQLLLRRAGHSLHTSAEMEVVRQMKEDLCYVAFNPSTEEQVKQPDTVYKLPDGQAIRVGPERYRAPECLFHPEQLGSESMG 273
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_008890518.1 (hypothetical protein PPTG_00774 [Phytophthora parasitica INRA-310] >ETI56622.1 hypothetical protein F443_00911 [Phytophthora parasitica P1569] >ETK96424.1 hypothetical protein L915_00854 [Phytophthora parasitica] >ETL49789.1 hypothetical protein L916_00843 [Phytophthora parasitica] >ETM02855.1 hypothetical protein L917_00810 [Phytophthora parasitica] >ETM56092.1 hypothetical protein L914_00841 [Phytophthora parasitica] >ETN24454.1 hypothetical protein PPTG_00774 [Phytophthora parasitica INRA-310] >ETO85429.1 hypothetical protein F444_00918 [Phytophthora parasitica P1976] >ETP26423.1 hypothetical protein F441_00889 [Phytophthora parasitica CJ01A1] >ETP54407.1 hypothetical protein F442_00865 [Phytophthora parasitica P10297] >KUF77737.1 actin [Phytophthora nicotianae] >KUF81924.1 actin [Phytophthora nicotianae])

HSP 1 Score: 391.7 bits (1005), Expect = 1.800e-105
Identity = 187/294 (63.61%), Postives = 225/294 (76.53%), Query Frame = 0 
Query:    2 EGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE----------------------TPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            E + NQP+VIDNG+G++KAGFAGG+ P+V+F S VG  KH RMMPGGA EG DV VG+++Q HRG F+  Y MEHG+V DW  M R+W H+YS+D LNV SE+HPVLLTEAPLNP+ NR++A EV FE FNVP+LF++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAITR D+AGRDVT  LQLLLRR+G N QTSAE+EVVR+IKE+ CYV+FNP KEE+                      +     AY LPDG  L +G E+FRAPE+LFRPE+IGSE +G
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQHHRGLFKIQYAMEHGVVTDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSALAVKDMISKSKSTTTSGDDTSAYYLPDGTLLNIGPEKFRAPEVLFRPEIIGSEARG 301
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_002908240.1 (actin-like protein [Phytophthora infestans T30-4] >EEY61323.1 actin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 388.7 bits (997), Expect = 1.600e-104
Identity = 187/294 (63.61%), Postives = 224/294 (76.19%), Query Frame = 0 
Query:    2 EGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE----------------------TPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            E + NQP+VIDNG+G++KAGFAGG+ P+V+F S VG  KH RMMPGGA EG DV VG+++Q HRG F+  Y MEHG+V DW  M RVW H+YS+D LNV SE+HPVLLTEAPLNP+ NR++A EV FE FNVP+LF++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAITR D+AGRDVT  LQLLLRR+G N  TSAE+EVVR+IKE+ CYV+FNP KEE+                      +     AY LPDG  L +G E+FRAPE+LFRPE+IGSE +G
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQYHRGLFKIQYAMEHGVVTDWNSMHRVWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFLTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSALAVKDMITKSKSTTTSGDDTSAYYLPDGTLLNIGPEKFRAPEVLFRPEIIGSEARG 301
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_009523456.1 (hypothetical protein PHYSODRAFT_259446 [Phytophthora sojae] >EGZ20739.1 hypothetical protein PHYSODRAFT_259446 [Phytophthora sojae])

HSP 1 Score: 385.6 bits (989), Expect = 1.300e-103
Identity = 182/272 (66.91%), Postives = 219/272 (80.51%), Query Frame = 0 
Query:    2 EGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            E + NQP+VIDNG+G++KAGFAGG+ P+V+F S VG  KH RMMPGGA EG DV VG+++Q HRG F+  Y MEHG+V DW  M R+W H+YS+D LNV SE+HPVLLTEAPLNP+ NR++A EV FE FNVP+LF++PQA+LSLYASGRTTGVVLD GDGV+HVVPVYEGF LPHAITR D+AGRDVT  LQLLLRR+G N QTSAE+EVVR+IKE+ CYV+FNP KEE+      A        L +G E+FRAPE+LFRPE+IGSE +G
Sbjct:    8 EVLGNQPLVIDNGSGLMKAGFAGGETPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNRVQHHRGLFKIQYAMEHGVVTDWNSMHRIWQHVYSKDMLNVQSEDHPVLLTEAPLNPVANRQRAGEVFFEAFNVPSLFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVYEGFTLPHAITRMDIAGRDVTRHLQLLLRRAGYNFQTSAEREVVREIKEKLCYVAFNPTKEEQLEAEKSA--------LAIGPEKFRAPEVLFRPEIIGSEARG 271
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: GAY00681.1 (actin-like protein [Pythium insidiosum])

HSP 1 Score: 384.8 bits (987), Expect = 2.200e-103
Identity = 189/292 (64.73%), Postives = 221/292 (75.68%), Query Frame = 0 
Query:    6 NQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE----------------------TPPHAD--AYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            NQP+VIDNG+G++KAGFAGGD P+V+F S VG  KH RMMPGGA EG DV VG+K+Q HRG F+  Y MEHG+V DW  M R+W H+YS+D L+V SE+HPVLLTEAPLNP+ NR++A EV FE FNVP+LF++PQA+LSL ASGRTTGVVLD GDGV HVVPVYE F LPHAITR DVAGRDVT  LQLLLRR+G N QTSAE+E+VR+IKE+ CYV+FNP KEE+                      TP   D  AY LPDG  L +G E+FRAPE+LFRPELIGSE  G
Sbjct:    8 NQPLVIDNGSGLMKAGFAGGDTPQVVFPSFVGTTKHTRMMPGGAYEGGDVFVGNKVQHHRGLFKIQYAMEHGVVTDWNSMHRIWQHVYSKDMLHVNSEDHPVLLTEAPLNPVQNRQRAGEVFFEAFNVPSLFVSPQAVLSLXASGRTTGVVLDVGDGVCHVVPVYESFTLPHAITRMDVAGRDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPTKEEQLEAEKSAASVKDLLSGTKAKPVTPSSDDSSAYYLPDGTILNIGPEKFRAPEVLFRPELIGSEGGG 299
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_009826384.1 (hypothetical protein H257_03817 [Aphanomyces astaci] >ETV84692.1 hypothetical protein H257_03817 [Aphanomyces astaci])

HSP 1 Score: 383.3 bits (983), Expect = 6.500e-103
Identity = 186/282 (65.96%), Postives = 220/282 (78.01%), Query Frame = 0 
Query:    6 NQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE-------------TPPHADA-YQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            NQP+V+DNG+G+LKAGFAGG+ P+V+F S VG  KH+RMM GGA E  D  VGS++Q+HRG F   Y MEHG+V DW  M+R+W H+YS+D LN+ S+EHPVLLTEAPLNP  NR KAAEV FE+FN PA F++PQA+LSLYASGRTTGVVLD GDGVSHVVPVYE F LPHAITR DVAGRDVT+ LQLL RR+G N QTSAE EVV++IKE+ CYV+FNP KEE+              P HA + Y+LPDG  L +G E+FRAPEILFRP+LIGSE  G
Sbjct:    5 NQPVVVDNGSGVLKAGFAGGELPQVVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFSIKYAMEHGIVTDWDRMQRIWEHMYSKDMLNITSDEHPVLLTEAPLNPAANRVKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVSHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYNFQTSAELEVVKEIKEKLCYVAFNPTKEEQLASHHSISDATSGNPSHASSEYRLPDGNILQLGPEKFRAPEILFRPDLIGSEHTG 286
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: XP_008870731.1 (hypothetical protein H310_07170 [Aphanomyces invadans] >ETW00596.1 hypothetical protein H310_07170 [Aphanomyces invadans])

HSP 1 Score: 380.9 bits (977), Expect = 3.200e-102
Identity = 184/286 (64.34%), Postives = 219/286 (76.57%), Query Frame = 0 
Query:    6 NQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPH------------------ADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            NQP+V+DNG+G+LKAGFAGG+ P+V+F S VG  KH+RMM GGA E  D  VGS++Q+HRG F   Y MEHG+V DW+ M+R+W H+YS+D LN+ S+EHPVLLTEAPLNP  NR KAAEV FE+FN PA F++PQA+LSLYASGRTTGVVLD GDGVSHVVPVYE F LPHAITR DVAGRDVT+ LQLL RR+G N QTSAE EVV++IKE+ CYV+FNP KEE+   H                  +  Y+LPDG  L +G E+FRAPEILFRP+LIGSE  G
Sbjct:    5 NQPVVVDNGSGVLKAGFAGGELPQVVFPSYVGTTKHLRMMAGGAYESGDTFVGSRVQQHRGLFSIKYAMEHGIVTDWERMQRIWEHMYSKDMLNIASDEHPVLLTEAPLNPAANRIKAAEVFFESFNAPAFFVSPQAVLSLYASGRTTGVVLDVGDGVSHVVPVYESFTLPHAITRMDVAGRDVTNYLQLLCRRAGYNFQTSAELEVVKEIKEKLCYVAFNPTKEEQLASHHAINDPTNPVGSSSSAHASSEYRLPDGNILQLGPEKFRAPEILFRPDLIGSEHTG 290
[Close]
BLAST of NO05G01980 vs. NCBI_GenBank
Match: CCA24024.1 (actinlike protein putative [Albugo laibachii Nc14])

HSP 1 Score: 378.6 bits (971), Expect = 1.600e-101
Identity = 181/284 (63.73%), Postives = 220/284 (77.46%), Query Frame = 0 
Query:    6 NQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGALEGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNVPSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASGRTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRSGRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEE----------------TPPHADAYQLPDGVTLMVGAERFRAPEILFRPELIGSEEKG 274
            NQP+VIDNG+G++KAGFAGGD P+ +F S +G  KH RMMPGGA EG    VGSKL ++RG F+  Y MEHG+V DW  M R+W ++YS+D LNV SEEHPVLLTEAPLNP+ NR++A E+ FE FN+P+ F++PQA+LSLYASGRTTGVVLD GDGV+HVVPV+E F LPHAITR D+AGRDVTDQLQ LLRRSG + QTSAE+E+VR+IKE+ CYV+FNP KEE+                +     AY LPDG  L +GAE+FRAPE+LFRPELIGSE +G
Sbjct:   12 NQPLVIDNGSGLIKAGFAGGDVPQHVFPSYIGVTKHERMMPGGAFEGGTTFVGSKLTQYRGLFKLQYAMEHGIVKDWNSMHRIWQYLYSKDMLNVQSEEHPVLLTEAPLNPIQNRQRAGEIFFEAFNIPSFFVSPQAVLSLYASGRTTGVVLDVGDGVAHVVPVFESFTLPHAITRMDIAGRDVTDQLQKLLRRSGYHFQTSAEREIVREIKEKLCYVAFNPSKEEQIEADKLASAMNDPKSTSVDDTMAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSECRG 295
The following BLAST results are available for this feature:
BLAST of NO05G01980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28289.14.000e-13785.35arp1 actin-related protein 1 centractin beta [Nann... [more]
XP_024585297.18.200e-10664.26alpha-centractin [Plasmopara halstedii] >CEG48928.... [more]
CBN74860.11.400e-10567.77conserved unknown protein [Ectocarpus siliculosus][more]
XP_008890518.11.800e-10563.61hypothetical protein PPTG_00774 [Phytophthora para... [more]
XP_002908240.11.600e-10463.61actin-like protein [Phytophthora infestans T30-4] ... [more]
XP_009523456.11.300e-10366.91hypothetical protein PHYSODRAFT_259446 [Phytophtho... [more]
GAY00681.12.200e-10364.73actin-like protein [Pythium insidiosum][more]
XP_009826384.16.500e-10365.96hypothetical protein H257_03817 [Aphanomyces astac... [more]
XP_008870731.13.200e-10264.34hypothetical protein H310_07170 [Aphanomyces invad... [more]
CCA24024.11.600e-10163.73actinlike protein putative [Albugo laibachii Nc14][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003664NSK003664Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01980.1NO05G01980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G01980.2NO05G01980.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584085gene_2991Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g122gene2373Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01980.1NO05G01980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G01980.2NO05G01980.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01980 ID=NO05G01980|Name=NO05G01980|organism=Nannochloropsis oceanica|type=gene|length=2310bp
AGGGTCGTAGCCATCCATACGCGTAGCTAGGTGGGCTCCGGTTGACTCAA
TTGCGCCCTGCCGCGGCCACGCCTGTCGCTCGCTGACCCTCGCTCACCGC
TCAGCCATCGCCAAGGCAGCTCACGTTCTTCAGTCCCACATTCTTGCGAC
CACAAACCACTAGCATGGAAGGCATAACAAACCAGCCCATAGTTATTGAC
AATGGCACGGGCATTCTCAAGGCCGGCTTTGCGGGTGGCGATCGGCCGCG
TGTCATTTTCTCCTCGGCGGTCGGGCGGCCTAAACATGTCCGGATGATGC
CAGGCGGGGCATTGGAGGGGACGGACGTGTGCGTGGGGAGCAAACTGCAA
GAGCACAGGGGGGCTTTTCGTTGGAGCTATCCAATGGAGCACGGGATGGT
GGTAGATTGGCAAGACATGGAGCGGGTTTGGGGCCATATTTATTCGCGGG
ACCATTTGAATGTGCCTTCCGAAGAACATCCGgtacgtgtgtgtgctgcc
gtgtcaggtgtggtgggtgatttggcggcagcagaagatgtcaattcatg
aatatatataagttatgtaaccgtacatacaccgcataaatagGTTTTAC
TGACCGAGGCGCCTTTGAACCCGCTAACCAACCGCGAAAAGGCAGCAGAA
GTGCTTTTCGAGACTTTCAATGTTCCGGCCCTATTCATAGCGCCGCAGgt
gagaaagatttttgttcgataaatggggccgataagtgagggaagatgat
ttgagtaaagtatttagcaagaaatactttcatgttcgtgcccgcatctc
tgcccttgtttgtttcccctttttactcacacttctcctctccctctatc
ctcaacgaatagGCCATCCTAAGCCTCTACGCCTCAGGGCGGACGACCGG
CGTGGTGCTCGACTCAGGGGATGGAGTCAGTCATGTGGTGCCGGTGTACG
AGGGTTTTGCCTTGCCTCACGCCATTACACGCACCGATGTGGCGGGGCGG
GATGTTACGGATCAATTGCAGgtaggggccggaggcaggacaagaagttg
gaaaggtgcgggaggtgaagaaattagacctcaagtgacatagctgcatc
gtcttcactctaatcagtactttgaatttatttataacacagCTACTGCT
GCGACGGTCGGGCCGCAACCTCCAAACATCCGCCGAGAAGGAAGTAGTTC
GTCAAATCAAGGAAGAAAAATGCTACGTCTCGTTTAACCCCCGCAAGGAA
GAAGAGACCCCGCCCCACGCTGACGCTTACCAATTACCAGATGGCGTTAC
CCTTATGGTGGGTGCTGAGCGATTCCGTGCGCCGGAGATATTGTTTCGGC
CGGAGCTGATCGGGAGTGAGGAGAAGGGTAGGTGAGGGAGGGAGGGGGAA
GATGGCGGAGGGGATGTAGAAGATTTGGCGGGACAAACATAGTTGAATCA
GCGGGACGAGGATAGAGGTACTGGACTATTTACATCGAAATCGTCAAGAT
CCATTAATAGGCTTTTTCCTCGACCAGCGCTTTCCACACTCCCTTAACCC
TGTCATCCTTCGGCTCTCCTTCCTCTCCACCCCCCACCACAGGCGTGCAC
GAATGCGTAGTCAGCAGCGTTCTGAAAGCCGACCTAGACCTGCGCAAGGC
CTTTTTCAGTCAAATTGTGCTTGCAGGGGGCTCTACCCTCTTCCCTGGAT
ACGGCGATCGCCTCTTGAACGAGATTCGCAAGCTAGCCCCTCGAGATGTG
AAAATTAGGATATCAGCCCCGCCGGAACGGAAGCACTCCACATGGATTGG
CGGGTGGGTGTTTGAGGGTGGGGAGGGGTGGAACGGGAGAGGGGGGAGAT
ATAGGGGGAGAAAAATGGGTAAGAGGGTTTATTGAGTATGGCTCGCTGGC
ATGGCTGAAGGTGCCTTCGATTGCTTACTTGCCTGGTTCATCTTGTGGTA
GGCTCATCCCTCTTCCTGACTACAACTCCCGCTCATTCATTACTCCCTCC
TCCTGTTGCTCTCCCCCCACCACCCTCCCTTTAAAACAACAACCATAAGG
TCCATCCTTGCCTCCCTCGCGACATTCAAGTCTCTCTGGGTCACCCGCAG
CCAATATCAGGAGCACGGCGCTGCCATCGTCAATAAACGAACATTGTAAG
AGAAAGCAGGCGCAATAAAGACAAAATGAAAGAAATGTGCGCTGCTGATG
CAGACTGGATGTAAAAATATCGGCCGATGAAGTGACGAACTCGAACGAAC
GACGTATGACAGAAAGAAGAAGCATTTTTGAAAAGAAAAAGTAGTCTTCG
AATATAGTGA
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protein sequence of NO05G01980.1

>NO05G01980.1-protein ID=NO05G01980.1-protein|Name=NO05G01980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bp
MEGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGAL
EGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNV
PSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASG
RTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRS
GRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPHADAYQLPDGVTLMV
GAERFRAPEILFRPELIGSEEKGVHECVVSSVLKADLDLRKAFFSQIVLA
GGSTLFPGYGDRLLNEIRKLAPRDVKIRISAPPERKHSTWIGGSILASLA
TFKSLWVTRSQYQEHGAAIVNKRTL*
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protein sequence of NO05G01980.2

>NO05G01980.2-protein ID=NO05G01980.2-protein|Name=NO05G01980.2|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MEGITNQPIVIDNGTGILKAGFAGGDRPRVIFSSAVGRPKHVRMMPGGAL
EGTDVCVGSKLQEHRGAFRWSYPMEHGMVVDWQDMERVWGHIYSRDHLNV
PSEEHPVLLTEAPLNPLTNREKAAEVLFETFNVPALFIAPQAILSLYASG
RTTGVVLDSGDGVSHVVPVYEGFALPHAITRTDVAGRDVTDQLQLLLRRS
GRNLQTSAEKEVVRQIKEEKCYVSFNPRKEEETPPHADAYQLPDGVTLMV
GAERFRAPEILFRPELIGSEEKGR*
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Synonyms
Publications