NO05G01770, NO05G01770 (gene) Nannochloropsis oceanica

Overview
NameNO05G01770
Unique NameNO05G01770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3440
Alignment locationchr5:484310..487749 -

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Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:484310..487749 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Homology
BLAST of NO05G01770 vs. NCBI_GenBank
Match: GAX09712.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris])

HSP 1 Score: 240.4 bits (612), Expect = 7.500e-60
Identity = 118/282 (41.84%), Postives = 170/282 (60.28%), Query Frame = 0
Query:   17 NSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVF--YIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296
            NS    Y     + P     Y  +E  YD     DWMK   W+P+   ++Y + IF G++  + +  ++ + PLA WN  LS+FS +G IRV P +++   +  L    C  PE   G+ A GFW Q F+LSK+ EL DT FIV+ KKPL FLHWYHH++VLLFTW  Y   +P G  F++MNY VHA+MY YYFLMA++++P W  PI+IT+ QISQM VGV   V+  YI      E C + +++  +  +MY +YL+LFC+F  +R+ + G+ +  + K
Sbjct:   87 NSGNQKYLDFACLFPTFGKTYFPFELNYDPVGPRDWMKDNFWIPVACAIIYAIAIFWGRSYFEKRSAWNWRAPLALWNFGLSLFSTIGFIRVAPFVLFNIYSYTLRENCCFDPESHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHFEEREDCLMRKDINQSALLMYGSYLFLFCKFFFERYYIRGKPSKTSKK 368          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 238.8 bits (608), Expect = 2.200e-59
Identity = 124/273 (45.42%), Postives = 169/273 (61.90%), Query Frame = 0
Query:   23 YTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSV-PWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCY-TKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAV-FYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAG 293
            +TQ+FQ  P L PFY  +EK + ++   ++ ++  P +P+    +Y + I  G  +M+++   + K  LA WNL LS+FS  G++R VPHL++   T       C  P   YG  A G WV  FI SK+ EL+DTVFIV RK  LQFLHWYHH+TVLLF W  Y    + G+ FVAMNYSVHA+MY YY+L AI+  PSW+ P  IT+ QISQM+VGV   V  + Y     E C V  + + +  +MY +YLYLFC+F V+RF+ GG+   G
Sbjct:   31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLG 303          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.])

HSP 1 Score: 238.8 bits (608), Expect = 2.200e-59
Identity = 124/287 (43.21%), Postives = 177/287 (61.67%), Query Frame = 0
Query:   18 SRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKG---LSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIY--------KIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGA 294
            ++G  +  ++Q++PAL PFY ++EK +D+   F ++    WVP+LA  +Y    + G   M+++K FDLK  L  WNL+LS+ S  G +RV  HL+YL +  G        C +PE  Y + A G W   F +SKL EL+DT+F+VLRKKPL FLHWYHH TVLL +WF +    P + F+A+NYS+H +MY Y+FLMAI+  P W  P+++T+ QISQM VG+   V   Y            G+ CA+D  +++A  +MYSTYL LF +F V+R+  G Q   GA
Sbjct:   28 AQGVPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRY-AGQQKRKGA 313          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 237.7 bits (605), Expect = 4.900e-59
Identity = 124/273 (45.42%), Postives = 168/273 (61.54%), Query Frame = 0
Query:   23 YTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSV-PWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCY-TKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAV-FYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAG 293
            +TQ+FQ  P L PFY  +EK + ++   ++ ++  P +P+    +Y + I  G  +M+++   + K  LA WNL LS+FS  G++R VPHL+    T       C  P   YG  A G WV  FI SK+ EL+DTVFIV RK  LQFLHWYHH+TVLLF W  Y    + G+ FVAMNYSVHA+MY YY+L AI+  PSW+ P  IT+ QISQM+VGV   V  + Y     E C V  + + +  +MY +YLYLFC+F V+RF+ GG+   G
Sbjct:   31 FTQLFQHYPVLSPFYTEYEKNFHASSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKHEWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHPAETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLG 303          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 236.1 bits (601), Expect = 1.400e-58
Identity = 120/257 (46.69%), Postives = 165/257 (64.20%), Query Frame = 0
Query:   23 YTQMFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKK-----PFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLY 274
            + Q+FQ LP LEPFYM WEK +D +  F  ++    +PI+A ++Y+  +  G+  ++ ++     P +L    A+WN  L+ FS++G  RVVPH ++L   K      C AP+   YG+ A G WV  F +SKL EL+DTV +VL+ K   FLHWYHHVTVLL+TWF Y+  NPGI FVAMNYSVHA+MY YYFLM +++ P W  P++ITM QI QM+VGV   V   +  R   +CA+ + L+  C  MY+TYLY
Sbjct:   33 FVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRD-PSCALVRGLIPWCAAMYATYLY 288          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_013434038.1 (fatty acid elongation protein, putative [Eimeria necatrix] >CDJ65571.1 fatty acid elongation protein, putative [Eimeria necatrix])

HSP 1 Score: 232.6 bits (592), Expect = 1.600e-57
Identity = 136/289 (47.06%), Postives = 171/289 (59.17%), Query Frame = 0
Query:   26 MFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRP-SWLKPIYITMMQISQMVVGVATAVFYIY--------------KIRSGET---CAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296
            M +  P L+PFY ++E  + +A    W  +  +V  LA  +Y++  + G   MKN++PFDL+ PL YWNLAL+IFS MG++RVVP L  L  + G        P   YG+ A GFW   FI SK  EL+DTVFI+LRK+PL FLHWYHH TVLL+TW  YT E P GI FVAMN+SVHA+MY YYFL A   RP SW   I++T  QISQM VGV      +Y              +IR           + L  AC +MYSTY YLF E+ VKR++ G   AA A K
Sbjct:   32 MHERFPFLKPFYFSFETEFSAAAALSWNIANYYVAPLAACLYLLFCYCGTKYMKNREPFDLRTPLKYWNLALAIFSFMGMVRVVPQLACLVCSYGFEASLASPPVYAYGHGAAGFWTLLFIYSKFFELLDTVFIILRKRPLSFLHWYHHATVLLYTWDAYTWEQPAGIYFVAMNFSVHAVMYFYYFLAAQLRRPLSW--GIFVTAAQISQMFVGVGVTFVSMYFAFSFPYRPLWRREQIRDALAHGHYITPKNLYWAC-LMYSTYFYLFAEYFVKRYVKGRGHAAKARK 317          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_008880479.1 (hypothetical protein H310_14402 [Aphanomyces invadans] >ETV90914.1 hypothetical protein H310_14402 [Aphanomyces invadans])

HSP 1 Score: 232.6 bits (592), Expect = 1.600e-57
Identity = 124/262 (47.33%), Postives = 163/262 (62.21%), Query Frame = 0
Query:   26 MFQVLPALEPFY-MNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFIL 286
            + +  PAL   Y   WE TY+    + + K      I    +Y V   GG+ +MKN  PF L   LA WN  L++FS +G IR VP L+    T+G+    C    P YG   VG WV  FI SK+ ELIDT+FIVLRKKPL FLHWYHH+TVL+F W  Y   +P G+ FVAMNY+VHA+MY YYFL AI +R  W K  ++T++Q++QMVVGVA +V  +Y IRSG  C +D+E L    +MYS+Y  LF +F ++R+ L
Sbjct:    4 LLEQYPALSVIYPFEWENTYEFTWEYGFCKDTMTHIIALCAIYCVLCLGGREVMKNFAPFGLNNALAAWNFGLALFSAIGSIRTVPFLLNSLVTRGVYFNVCSEAFPHYGRGPVGLWVTLFIFSKIPELIDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPMGLFFVAMNYTVHAVMYFYYFLAAIGIRAPWAK--FVTVIQLAQMVVGVAVSVAGVYYIRSGAPCLLDRENLKWAIIMYSSYFALFLKFFIERYFL 263          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_013227826.1 (fatty acid elongation protein, putative [Eimeria tenella] >CDJ36988.1 fatty acid elongation protein, putative [Eimeria tenella])

HSP 1 Score: 231.9 bits (590), Expect = 2.700e-57
Identity = 134/289 (46.37%), Postives = 171/289 (59.17%), Query Frame = 0
Query:   26 MFQVLPALEPFYMNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRP-SWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCA-----------------VDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296
            M +  P L+PFY ++E  + +A    W  +  +V  LA  +Y++  + G   MKN++PFDL+ PL YWNLAL+IFS MG++RVVP L  L  + G        P   YG+ A GFW   FI SK  EL+DTVFI+LRK+PL FLHWYHH TVLL+TW  YT E P GI FVAMN+SVHA+MY YYFL A   RP SW   I++T+ QISQM VGV      +Y   S    A                   + L  AC +MYSTY YLF E+ VKR++ G + +  A K
Sbjct:   32 MHERFPFLKPFYFSFETEFSAAAALSWNIANYYVAPLAACLYLLFCYCGTKYMKNREPFDLRTPLKYWNLALAIFSFMGMVRVVPQLACLVCSYGFEASLASPPVYAYGHGAAGFWTLLFIYSKFFELVDTVFIILRKRPLSFLHWYHHATVLLYTWDAYTWEQPAGIYFVAMNFSVHAVMYFYYFLAAQLRRPLSW--GIFVTVAQISQMFVGVGVTFVSMYFAFSFPYRAFWRKEQIQDALSHGHYITPKNLYWAC-LMYSTYFYLFAEYFVKRYVKGKEHSRKAHK 317          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_009843855.1 (hypothetical protein H257_16934 [Aphanomyces astaci] >ETV66627.1 hypothetical protein H257_16934 [Aphanomyces astaci])

HSP 1 Score: 229.9 bits (585), Expect = 1.000e-56
Identity = 123/262 (46.95%), Postives = 162/262 (61.83%), Query Frame = 0
Query:   26 MFQVLPALEPFY-MNWEKTYDSAIVFDWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENP-GIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFIL 286
            + +  PAL   Y   WE  Y+     ++ K      I    VY V   GG+ +MK   PF L   LA WNL L++FS +G IR VP L+    T+G+    C    P YG   VG WV  FI SK+ EL+DT+FIVLRKKPL FLHWYHH+TVL+F W  Y   +P G+ FVAMNY+VHA+MY YYFL AI +R  W K  ++T++Q++QMVVGVA +V  +Y IRSG  C +D+E L    +MYS+Y  LF +F ++R+ L
Sbjct:    4 LLEQYPALSVIYPFEWENKYEXXXXXEFCKDTMTHIIALCAVYCVLCLGGREVMKKFSPFGLTSALALWNLGLAVFSTIGSIRTVPFLLNSLFTRGVYHNVCSEAFPHYGRGPVGLWVTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPMGLFFVAMNYTVHAVMYFYYFLAAIGIRAPWAK--FVTVIQLTQMVVGVAVSVAGVYYIRSGAPCLLDRENLKWAIIMYSSYFALFLKFFIERYFL 263          
BLAST of NO05G01770 vs. NCBI_GenBank
Match: XP_002184740.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43799.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 229.2 bits (583), Expect = 1.700e-56
Identity = 121/247 (48.99%), Postives = 162/247 (65.59%), Query Frame = 0
Query:   53 MKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIFSIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKLAELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCY-TKENPGIIFVAMNYSVHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAV---FYIYKIRSGETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPK 296
            M++ P VPI A ++Y + +  GQA  + ++P   +  LA WNL L++FS++G++R  P LV+  AT  L    C  P+  YG+ + G WVQ FILSK  ELIDTVFI++ KK L FLHWYHH+TVLL+ W  Y TK  PGI FV MNY+VHA MYGYYFLMAI+ RP WL P+ +T MQISQMVVGVA  +   +Y  +    ++C + +E   A  VMY +YL+LF +F V R++ G Q    + K
Sbjct:    1 MEAHPLVPIGACLLYGLLMVAGQAYFRTREPLRARTSLAAWNLFLALFSLVGMLRTFPQLVHNLATLTLRENLCANPQATYGSGSTGLWVQLFILSKFPELIDTVFIIVNKKKLIFLHWYHHITVLLYCWHSYVTKSPPGIFFVVMNYTVHASMYGYYFLMAIRARPRWLNPMIVTTMQISQMVVGVAVTLLGFYYSARAADHQSCRIKRENNTAAFVMYGSYLFLFLQFFVGRYV-GTQSPVASKK 246          
The following BLAST results are available for this feature:
BLAST of NO05G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX09712.17.500e-6041.84elongation of very long chain fatty acids protein ... [more]
EWM29442.12.200e-5945.42fatty-acyl [Nannochloropsis gaditana][more]
ASU87515.12.200e-5943.21long-chain fatty acid elongase [Nannochloropsis sp... [more]
XP_005855601.14.900e-5945.42fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
EWM21810.11.400e-5846.69fatty-acyl elongase [Nannochloropsis gaditana][more]
XP_013434038.11.600e-5747.06fatty acid elongation protein, putative [Eimeria n... [more]
XP_008880479.11.600e-5747.33hypothetical protein H310_14402 [Aphanomyces invad... [more]
XP_013227826.12.700e-5746.37fatty acid elongation protein, putative [Eimeria t... [more]
XP_009843855.11.000e-5646.95hypothetical protein H257_16934 [Aphanomyces astac... [more]
XP_002184740.11.700e-5648.99predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003691NSK003691Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01770.1NO05G01770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|391778gene_2966Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g102gene2355Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01770.1NO05G01770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01770 ID=NO05G01770|Name=NO05G01770|organism=Nannochloropsis oceanica|type=gene|length=3440bp
TTGCCAACTTTGATCTTATTTCATTTTCTTGAAAAGGGGGAATCCAGAAT
CGTCAGGCCTCTCAAAGTTTACACCCACCTTATTTGCTTGATCCGCTGAT
TAAAGTATGTCCGTCATTCAGGCACAGTGCCTACGAGACAAGGGTCGTCT
CCGAAGACCTGAGAAACAACAAGATAGAAAGAATAATGTGACATTGTTTC
CTGACAGGGAGTTAGAGGGGGAGGGGAGAGGGAGCCCGGGGGCCGATTCT
GACAGAAAGTGGGCAATATATTTGTGATGCTTAAAGGCCTGTAGTGGTGA
CCTATGGGTCGGAACGGGTTATTCCAGTCATCGACCCATCTGTTGTTTAT
TCTCTCGATTTCTAAAAAAATAATATTTTCAAAATGAAAGAAAAAAATTC
TTCATAGTTGAGAAACAAGTTTCTAGCCAAGCCATCTCCCTGCACGTGAC
GGGCGGTGTGTACAAGGCCTAAGTACAAATTCACCGCATCATGCTGATGT
GTGATAACTAGTGATTCCACTTTCATGTGGACGAGTCGCAGTCCACAATT
TGAACTTTGGTAAAGTTTAAAGATTGTAAAGGGTAAGGGAGTCAGGTTGG
AGTTCTTCATCAAAAGGCTGCTGATGTCCTTCTTCCAGGGTGGGGAACAG
GGGAGTACATCTCCATTGAAAAAAAAATCCTTCGTACCACTGGCGTGTGA
GGTGTGGGGTTTAAGGTGGGGACTGTCGATGGTCGGGTAAGAGGGGACTT
TGACCATGGAGAAGATGGCGACACCTCTTGCTCCCGGGTCCTACGTGGAG
CCCGAAAAGCAAAATGATCGGTTACCCTATTTTGCCGGGCCTTCATTGCT
TCATTAGTGCTCTTGCAAACATACTGTTAAAATGGTCCCACACGTCGTGT
GTAAAAATGCGAGTATGCACGCCAGCGGGGCATTCGATGGCTCTCGCAGT
CCGTGCCTCGAGACCCGATCTTTCTGGTGTATGGTGGTGGTAATGCGACG
CGCCAAAGAAAGAAAACGCTTTCTACGTTGCTCGCGGCCCCCCGCCACGC
AGCATCTGTCATGGTTGTCATGATTTGCTGGGTTAGCGAGGCATGGTGCT
TGGAGAGGGGAGGTGTCATGACGGGACGCCGGCATTTCTTTCCAGCACAT
TCCCAAACAGGATGCGGCCGCGTGCGCTTAGAAGAAAGGTATACGTCGAC
GCCTCGCCTTCTCAAATGCATGCCTAGGTCCGGGCGCGCTCAGTGGCGGA
GGCTGAGCACCACAATGCCGCATCCAAGACTGTCTTAATTCTCCCAATGC
CTACCTAGCTAGACCCACACACGACTTGCCCCACTGCCAAATCACGCGTT
GAAGGACAAGCTGGACGTGCTTACTGGTCCTCTTGTGCCTGCTGGGGCCG
CTGTGCATCCGTATGCCCGAGGCCAGCGGGTGTAGTGGATGGTATGCACA
TCGTTCAGCCTCTCCTCCAGTGAGCATTCTCGACAGCCGGCTGCCGGGCA
CACATGATGCACGACGCTAGGCGCAATTAATGAGCATCCGTCGAGGCATT
CCACGGCCATCGCTTCCACACGAATACAAGCAAGCATAGCTTCTTACTCA
CACGCACCCCACCCTCCCTCTCTCACAGACGGCATCAGAGCCAGCACAGG
ATCTATTCCTCATTCCGGTCAATCATGAAGTGGGTCCTGCAAGAAGGAGT
GGACTTCAAGCCCCACGGCCCCAACAGCCGCGGAACGATGTACACGCAAA
TGTTCCAAGTCCTCCCGGCCCTGGAGCCGTTCTACATGAACTGGGAGAAG
ACCTACGACTCTGCTATTGTATTTGACTGGATGAAGAGCGTGCCTTGGGT
TCCGATCTTGGCGGTGGTAGTTTATGTCGTAGGAATTTTCGGTGGACAAG
CCATTATGAAGAACAAGAAGCCCTTTGATCTAAAGTGGCCCTTGGCGTAC
TGGAACTTGGCTTTGTCCATATTTTCGATCATGGGCGTGATTCGCGTGGT
GCCTCACCTTGTCTACCTGACAGCGACCAAGGGGTTGAGTGTCGTGGCGT
GCGGGGCCCCGGAGCCTCTGTATGGCAACGCCGCGGTAGGTTTTTGGGTG
CAAGCCTTCATTCTGTCGAAACTGGCAGAGCTGATCGACACGGTGTTCAT
CGTTCTGCGGAAGAAGCCTCTACAGTTCTTGCACTGgtacgggggttggg
atgggggaatggtggagccaaggagagggaaagcgagttagcattcatgc
gctgctatgtgtcctttacctggcgcagagcgtttgtgcccattacccat
atatagggaaagaaaggaggaaaaaggacacagagggatccaaactgtcc
ttatgcagagatcaatcgccacaagaggcatgaaccataggaagtcacgc
cctccttttgttcgcccctccctcctcctccccttagGTACCACCACGTG
ACGGTCCTCCTGTTCACCTGGTTCTGCTACACGAAGGAGAATCCGGGTAT
CATTTTTGTGGCCATGAATTATTCGGTGCATGCCATTATGTATGGCTACT
ACTTCCTGgtacgtgatccctttctttctctctcctttctcccactccta
ttgtgcacgcgtgtctctaccccctgacatagatccttttctctctccct
tcttccatgccttcatctctctcttccttcttctctactctttcttcccg
tcctgtcgcttcctccttgcttcgctcctgttatatccaggcaacaacta
agcctctcttgacactgacccaccctccctccctcccgcccgcccgaccg
ccctcctcagATGGCCATTCAGGTCCGACCTTCCTGGCTGAAGCCAATCT
ATATCACCATGATGCAAATCTCCCAAATGGTGGTGGGCGTCGCCACTGCC
GTCTTTTACATCTACAAGATCCGATCGGGCGAGACATGCGCCGTGGATCA
GGAACTGCTTATTGCCTGTGGAGTGATGTACTCTACCTACCTGTATTTGT
TCTGTGAGTTTGCGGTAAAGAGGTTCATTTTAGGCGGGCAGGGGGCGGCA
GGGGCGCCGAAGGGAAAAACGAAGGCGCAGTAGGGGGGGGAAAGAGGGGG
ATATATGGAAGGGGGCATTAGCAGTGGTGGAGGTGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGCAGC
AGGAGCGGCAATAGGAAGAGGATGAAGAGGAGTAGCAGTAAGATGAGGAG
GAGGAGGAAGAGGAGGAGGAGGAGGATTATGATGATGAGAAAGTGATTCC
TTTTTTCATTTGTCGTTGGGTTGGGTGAGTGGATGGGCGTCGGGTCGCTT
GTGGTTGTTTTGTGTCTCTGTGCTTATGTGGATGGGTGGG
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protein sequence of NO05G01770.1

>NO05G01770.1-protein ID=NO05G01770.1-protein|Name=NO05G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MKWVLQEGVDFKPHGPNSRGTMYTQMFQVLPALEPFYMNWEKTYDSAIVF
DWMKSVPWVPILAVVVYVVGIFGGQAIMKNKKPFDLKWPLAYWNLALSIF
SIMGVIRVVPHLVYLTATKGLSVVACGAPEPLYGNAAVGFWVQAFILSKL
AELIDTVFIVLRKKPLQFLHWYHHVTVLLFTWFCYTKENPGIIFVAMNYS
VHAIMYGYYFLMAIQVRPSWLKPIYITMMQISQMVVGVATAVFYIYKIRS
GETCAVDQELLIACGVMYSTYLYLFCEFAVKRFILGGQGAAGAPKGKTKA
Q*
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Synonyms
Publications