NO05G01660, NO05G01660 (gene) Nannochloropsis oceanica

Overview
NameNO05G01660
Unique NameNO05G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length651
Alignment locationchr5:455930..456580 -

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Properties
Property NameValue
DescriptionDephospho-kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:455930..456580 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004140dephospho-CoA kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0015937coenzyme A biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001977Depp_CoAkinase
Homology
BLAST of NO05G01660 vs. NCBI_GenBank
Match: EWM28160.1 (dephospho- kinase [Nannochloropsis gaditana])

HSP 1 Score: 269.2 bits (687), Expect = 1.100e-68
Identity = 139/212 (65.57%), Postives = 166/212 (78.30%), Query Frame = 0
Query:    2 SGAKRLFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSED-QQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVKKKIALD 213
            +G K + VHGLTGGIA+GK+HAC VL+ LGAT+L+ADLLAH CYAP TP N++LR+ FG SIFT DG VDR KLGKLVF  D + L +LNK+MFPA E R KEEIARL  EG +WVVVEAAVL EAGW+ WMDEVWTM++DP +A+ RLM R+G+TA EA+ RI A  SNE R + A ++IDS GSKE+TA KLRVA  DLK+RVK    LD
Sbjct:   12 AGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRVKDVHNLD 223          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: GBD23344.1 (Dephospho-CoA kinase [bacterium HR29])

HSP 1 Score: 168.3 bits (425), Expect = 2.600e-38
Identity = 90/200 (45.00%), Postives = 123/200 (61.50%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVK 207
            +FV GLTGGIA+GKS   G  +  G  ++ AD+L H+ Y P      K+ + FG  I  ADG +DR  LG  VF + Q+L +L  +++PAI R   +E+A LE  G    V+EAAVL EAGWE   DE+W ++V+P +A  RL  RNGL    A  RIR+Q+SNEERV+RA VVI++ G+ +E   +     N L  RV+
Sbjct:    1 MFVIGLTGGIASGKSTVAGYFRERGVPVIDADILGHRTYEPGAEAYSKVIEAFGNDILAADGTIDRKVLGAKVFGKPQELKRLTDIVWPAIRRLASQELAELEAGGNELAVLEAAVLLEAGWEDLTDEIWAVIVEPELAVQRLRSRNGLDEAAAWARIRSQLSNEERVRRAHVVIENNGTLDELRDRFEREWNALSARVR 200          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: PFG74487.1 (phosphopantetheine adenylyltransferase/dephospho-CoA kinase [Thermoflexus hugenholtzii])

HSP 1 Score: 162.9 bits (411), Expect = 1.100e-36
Identity = 84/200 (42.00%), Postives = 125/200 (62.50%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVK 207
            + V GLTGGIA+GKS      +  G  ++ AD+L H+ Y P T   +K+ +TFG  +  ADG +DR  LG  VF   ++L KL  +++P I R   E++A  E  G   VV+EAAVL EAGWE  +DE+W +VVDP +A  RL  RNGL    A  RI +Q++NEER+ R  V+I++ G+ +E   +++ A + L++R++
Sbjct:    1 MHVIGLTGGIASGKSTVTSFFRERGIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQLTNEERIARGDVIIENNGTLDELNARIQQAWDSLQERLR 200          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: WP_098503873.1 (dephospho-CoA kinase [Thermoflexus hugenholtzii])

HSP 1 Score: 162.5 bits (410), Expect = 1.400e-36
Identity = 84/198 (42.42%), Postives = 124/198 (62.63%), Query Frame = 0
Query:    9 VHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVK 207
            V GLTGGIA+GKS      +  G  ++ AD+L H+ Y P T   +K+ +TFG  +  ADG +DR  LG  VF   ++L KL  +++P I R   E++A  E  G   VV+EAAVL EAGWE  +DE+W +VVDP +A  RL  RNGL    A  RI +Q++NEER+ R  V+I++ G+ +E   +++ A + L++R++
Sbjct:   14 VIGLTGGIASGKSTVTSFFRERGIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQLTNEERIARGDVIIENNGTLDELNARIQQAWDSLQERLR 211          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: KPK46991.1 (hypothetical protein AMJ77_04575 [Dehalococcoidia bacterium SM23_28_2])

HSP 1 Score: 159.5 bits (402), Expect = 1.200e-35
Identity = 86/202 (42.57%), Postives = 129/202 (63.86%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVKKK 209
            +FV GLTGGI +GKS    +L++ GA +++AD + H+ Y P TP  +++   FG  +   DG++DR KLG++VFS+ Q   +L+ +  P ++R   E +  L  +G    V+EAA+L EAGW+   DEVW  VV P VA  R M+R+GL+  +AE RI AQ+SNEER++ A+VVID+  + EE A ++    +DL  R+  K
Sbjct:    1 MFVIGLTGGIGSGKSTVSEMLRAKGAAMVYADQIGHEAYRPGTPVWQQVVDAFGRQVVGGDGQIDRRKLGQVVFSDPQACRRLDAITHPPMKRMMAERLEELRRQGTRVAVLEAAILIEAGWDELADEVWMTVVSPEVAAQRSMERSGLSREQAEARIAAQLSNEERLKHAQVVIDTNCTLEEVAQRVDELWDDLIGRLAAK 202          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: GBD14438.1 (Dephospho-CoA kinase [bacterium HR25])

HSP 1 Score: 159.1 bits (401), Expect = 1.600e-35
Identity = 87/199 (43.72%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRV 206
            +F  GLTGG+ +GKS    +L+  GA +L+ADLL H+ Y P     +++ + FG  +  ADG +DR +L  +VF++ + L +LN +  P I    +E +A L  +G   VVVEAA+L EAGW+  +DEVW  V  P VA  R   R+G+   EA  R+RAQMSNEERV+RARVVID+  S EET  ++      L+ R+
Sbjct:    1 MFAIGLTGGLGSGKSTVAEMLRQKGAAVLNADLLGHRVYEPGRAAWQEVVEAFGQQVVAADGTIDRKRLASIVFADPEALRRLNAITHPRIREMIQEGLAELAAQGTEVVVVEAALLLEAGWDDLVDEVWVTVAPPEVAAQRAAARSGIPLEEALARVRAQMSNEERVRRARVVIDTDCSLEETCQQVHQEWERLQARL 199          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: PKB57685.1 (dephospho-CoA kinase [SAR202 cluster bacterium Casp-Chloro-G3])

HSP 1 Score: 157.5 bits (397), Expect = 4.600e-35
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDS 184
            + V GLTGGI TGKS    +LQ+LGA I++AD L HQ Y P T   +++ + FG  I    GE+DR +LG +VF++  QL +LN++M P + R    +I +L   G S VVVEAAVLFEAGW+  +DEVWT          RLM RNGL   E   RI++QMS+EER  R++VV+D+
Sbjct:    1 MIVIGLTGGIGTGKSEVARILQALGAVIINADQLGHQAYTPHTEIWDEVVKAFGEGILQPSGEIDRKQLGAIVFADPSQLARLNQIMHPRMARMVSAQIEKLREGGESAVVVEAAVLFEAGWDGLVDEVWTTESPLDAVVDRLMARNGLDKAEVVKRIKSQMSSEERSARSQVVVDN 177          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: XP_009021182.1 (hypothetical protein HELRODRAFT_82715 [Helobdella robusta] >ESO00545.1 hypothetical protein HELRODRAFT_82715 [Helobdella robusta])

HSP 1 Score: 157.1 bits (396), Expect = 6.000e-35
Identity = 84/203 (41.38%), Postives = 133/203 (65.52%), Query Frame = 0
Query:    5 KRLFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRVKK 208
            K  F+ GLTGGIA+GK+     L+ LGA I++ DLL H+ Y P +   EK+RQ FG+ +  A G VDR KLG +VFS+  +L +LN++++PAI++  ++ + +L  EG+S +V++AAVL EAGW+  + EVWT ++    A  R+M+RN ++  EA  RI++Q+SN+ER+ R+ VV+ +      T  ++  A   L +R+ K
Sbjct:  314 KSPFIIGLTGGIASGKTSVSKRLEGLGAGIINCDLLGHEAYLPGSETLEKIRQNFGSEVIDATGHVDRKKLGGIVFSDKNKLNELNQIVWPAIQKLVEKYVQKLTSEGKSIIVLDAAVLLEAGWDGGVHEVWTAIIPAHEAEKRIMERNKVSQGEARERIKSQISNQERISRSNVVLCTLWEYPYTQKQVEKAWRLLLERIPK 516          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: XP_015116701.1 (PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum] >XP_015116702.1 PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum] >XP_015116703.1 PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum])

HSP 1 Score: 156.0 bits (393), Expect = 1.300e-34
Identity = 88/198 (44.44%), Postives = 122/198 (61.62%), Query Frame = 0
Query:    6 RLFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKE---ETAGKLRVAVND 201
            R ++ GLTGGIA+GKS     LQSLGA ++H D LAH  Y P     +++ + FG  I  A+G +DR KLGK+VF++ +QL +LNK ++PAI      E+ RL  EG   +V+EAAVL +A W+    E+WT ++    A  R+M+RNGLT  EAE RI  Q SN E+V+ A VV+ +  S +   E   +   AVND
Sbjct:  318 RPYIIGLTGGIASGKSSVAEKLQSLGAGVVHCDKLAHDLYEPGRTGFQRVVEVFGEDILDAEGRIDRKKLGKIVFNDKEQLDRLNKAVWPAILDAALAEVERLHTEGYEIIVMEAAVLIQAKWQSVCHEIWTCIIPHKEAVKRMMERNGLTEQEAEARINVQPSNTEQVEAATVVLSTLWSHQVTLEQVNRAWKAVND 515          
BLAST of NO05G01660 vs. NCBI_GenBank
Match: KPK22001.1 (hypothetical protein AMJ76_01215 [Dehalococcoidia bacterium SM23_28_1])

HSP 1 Score: 155.2 bits (391), Expect = 2.300e-34
Identity = 85/199 (42.71%), Postives = 125/199 (62.81%), Query Frame = 0
Query:    7 LFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTPENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERRTKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLMKRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVNDLKKRV 206
            +FV GLTGGI +GKS    +L++ GA I++AD + H+ Y P  P  E++   FG  +   DG++DR KLG++VFS+ +   +L+ +  P +E+   E +  L  +G    V+EAA+L EAGW    DEVW  VV P VA  R M+R+GL+  +AE RI AQ+SNEER++ A+VVID+  S  E A ++    +DL  R+
Sbjct:    1 MFVIGLTGGIGSGKSTVSEMLRAKGAAIVYADQIGHEVYRPGAPVWEQVVAAFGRQVVADDGQIDRRKLGQVVFSDPEARQRLDAITHPPMEQMMAERLEELRQQGTRVAVLEAAILIEAGWAHLADEVWVTVVSPKVAAERSMERSGLSREQAEARIAAQLSNEERLKHAQVVIDTNCSLAEVAQRVDELWDDLIARL 199          
The following BLAST results are available for this feature:
BLAST of NO05G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28160.11.100e-6865.57dephospho- kinase [Nannochloropsis gaditana][more]
GBD23344.12.600e-3845.00Dephospho-CoA kinase [bacterium HR29][more]
PFG74487.11.100e-3642.00phosphopantetheine adenylyltransferase/dephospho-C... [more]
WP_098503873.11.400e-3642.42dephospho-CoA kinase [Thermoflexus hugenholtzii][more]
KPK46991.11.200e-3542.57hypothetical protein AMJ77_04575 [Dehalococcoidia ... [more]
GBD14438.11.600e-3543.72Dephospho-CoA kinase [bacterium HR25][more]
PKB57685.14.600e-3548.02dephospho-CoA kinase [SAR202 cluster bacterium Cas... [more]
XP_009021182.16.000e-3541.38hypothetical protein HELRODRAFT_82715 [Helobdella ... [more]
XP_015116701.11.300e-3444.44PREDICTED: bifunctional coenzyme A synthase [Diach... [more]
KPK22001.12.300e-3442.71hypothetical protein AMJ76_01215 [Dehalococcoidia ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003703NSK003703Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01660.1NO05G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583951gene_2954Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g90gene2347Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01660.1NO05G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01660 ID=NO05G01660|Name=NO05G01660|organism=Nannochloropsis oceanica|type=gene|length=651bp
ATGTCCGGAGCGAAGCGGCTGTTCGTCCACGGCCTTACCGGAGGCATTGC
CACTGGCAAAAGCCATGCATGTGGCGTCCTCCAATCATTAGGTGCCACCA
TCCTCCACGCCGATCTTCTTGCCCACCAATGCTATGCTCCCCAAACACCG
GAAAACGAAAAATTGCGTCAAACATTCGGCACAAGCATTTTCACGGCCGA
TGGGGAGGTGGATAGAGCGAAGCTGGGTAAGCTTGTTTTTTCTGAGGATC
AGCAGTTGCTGAAACTGAATAAGGTCATGTTTCCGGCCATTGAGAGGAGG
ACGAAAGAGGAGATTGCGCGGTTGGAAATTGAGGGGAGGAGTTGGGTAGT
GGTGGAGGCTGCGGTGTTGTTTGAGGCGGGGTGGGAGAGGTGGATGGATG
AGGTATGGACAATGGTGGTTGATCCTGCAGTGGCACGACTACGATTGATG
AAACGAAATGGTTTAACGGCCATGGAGGCGGAGGGGAGAATCAGAGCACA
GATGAGTAATGAGGAGAGGGTGCAAAGGGCCAGGGTTGTAATTGATTCGA
AAGGGAGCAAGGAGGAGACAGCGGGAAAATTAAGAGTAGCAGTAAATGAT
TTAAAGAAACGCGTTAAAAAAAAAATTGCGTTGGATTCTATGTCATGTTA
A
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protein sequence of NO05G01660.1

>NO05G01660.1-protein ID=NO05G01660.1-protein|Name=NO05G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=217bp
MSGAKRLFVHGLTGGIATGKSHACGVLQSLGATILHADLLAHQCYAPQTP
ENEKLRQTFGTSIFTADGEVDRAKLGKLVFSEDQQLLKLNKVMFPAIERR
TKEEIARLEIEGRSWVVVEAAVLFEAGWERWMDEVWTMVVDPAVARLRLM
KRNGLTAMEAEGRIRAQMSNEERVQRARVVIDSKGSKEETAGKLRVAVND
LKKRVKKKIALDSMSC*
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Synonyms
Publications