NO05G01580, NO05G01580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01580 vs. NCBI_GenBank
Match: EWM28256.1 (sodium bile acid symporter family protein [Nannochloropsis gaditana]) HSP 1 Score: 418.7 bits (1075), Expect = 2.100e-113 Identity = 256/319 (80.25%), Postives = 272/319 (85.27%), Query Frame = 0 Query: 98 ATLIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREA--GKKGAK 415 AT++AAAKSLYFP YVLLAGLLG TRPQLY LSE FITRALSAVMVLMGMTLS+DDFARIG SKR V LGWCAQFSIMP +AL+MSR+FRLPPHLAAGV+LVGCCPGGTASNLVTLLA ADVALSISMTAVSTLTAG MTP XXXXXXXXXXXXXXXXXXX GL+TN+YLLPS XX TP++SGLLVAAICGKVVATNA AV Q+G LLGA++ LH FGFFFGF MAR LGF+RQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGS+ AWVWSRE G KGAK Sbjct: 95 ATILAAAKSLYFPAYVLLAGLLGVTRPQLYAGLSEGFITRALSAVMVLMGMTLSMDDFARIGRSKRAVVLGWCAQFSIMPGMALIMSRVFRLPPHLAAGVILVGCCPGGTASNLVTLLAEADVALSISMTAVSTLTAGAMTPLLTXXXXXXXXXXXXXXXXXXXLQVVLLPVALGLVTNSYLLPSXXXXXXXXXXXSTPLVSGLLVAAICGKVVATNAAAVLQSGGSLLGAVLALHSFGFFFGFWMARALGFSRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSLAAWVWSREGDRGGKGAK 413
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_005832174.1 (hypothetical protein GUITHDRAFT_108836 [Guillardia theta CCMP2712] >EKX45194.1 hypothetical protein GUITHDRAFT_108836 [Guillardia theta CCMP2712]) HSP 1 Score: 208.8 bits (530), Expect = 3.400e-50 Identity = 140/308 (45.45%), Postives = 180/308 (58.44%), Query Frame = 0 Query: 109 FPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKKGAKEE 417 FP +VL G+LG TRP L IT +L+ M+ MGMTL V DF R+ S R V LG+ QF+IMP + M++LF L P A G++LV CPGGTASNLVTL+A ADVALS+ M XXXXXXX GL NT+ + + +S +TP+L +LV+ ICG V+A A + AG+PLLGA++ LH+ GF G+ + R+LG+ +++TVSIETGMQNSAL VVLA + PL+ LP A+SA CHSVLGS A W R G+K KEE Sbjct: 7 FPLWVLAGGVLGVTRPAALAWLKGDLITASLALTMLFMGMTLDVKDFQRVMQSPRQVFLGFMCQFTIMPFLGWSMAKLFGLSPAFAVGLILVSACPGGTASNLVTLIAKADVALSVLMXXXXXXXXXXXXXXXXXXXXGSLVPVDASGLLISTLQVVLAPVGLGLAINTF-----APAVCKMVSGVTPLLCVVLVSLICGSVIAQTASSFIAAGLPLLGAVIGLHLGGFLLGYFVPRILGYPEPISRTVSIETGMQNSALGVVLATRNFADPLTALPCAISATCHSVLGSSFAAYW-RLGGRK--KEE 306
BLAST of NO05G01580 vs. NCBI_GenBank
Match: GAV60673.1 (SBF domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 208.8 bits (530), Expect = 3.400e-50 Identity = 125/307 (40.72%), Postives = 171/307 (55.70%), Query Frame = 0 Query: 100 LIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407 LI S FP +V L L G +P + ++ +S M+ MGMTLS+DD + + + LG+ Q+S+MP L+S+L LP H AAG++LVGCCPGGTASN+VT +A +VALS+ MTA STLTA +MTP G N Y L +S + P ++ VA +CG +A NA A+ +G ++ A + LH GFFFG+++AR+LG + +KTVSIE GMQNS L VVLA +PL+ +P AVS+VCHS+ GSVLA +W R Sbjct: 111 LIGEVISTAFPIWVALGCLSGLMKPSSFSWVTPKLSIIGISITMLGMGMTLSLDDLSEALAMPKEILLGFVLQYSVMPISGFLLSKLLCLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTLTAAVMTPFLTAKLAGQYVAVDANGLLMSTLQVVLLPVLAGAFLNQYF-----QGLVKFVSPLMPPIAVATVAVLCGNAIAQNASAILMSGHQVVLAALLLHASGFFFGYMLARMLGLDVASSKTVSIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSIFGSVLAGIWRR 412
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_004488981.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Cicer arietinum]) HSP 1 Score: 204.9 bits (520), Expect = 4.800e-49 Identity = 122/307 (39.74%), Postives = 174/307 (56.68%), Query Frame = 0 Query: 100 LIAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407 ++ A S FP +V + +LG RP ++ ++ L+ +M+ MGMTL++DD + V G+ Q+S+MP A L+S+L LP H AAG++LVGCCPGGTASN+VT LA +VALS+ MTA STL+A IMTP G L N Y P L +S + P ++ VA +CG +A ++ A+ +G ++ A+ LH GFFFG+++AR LG + ++T+SIE GMQNS L VVLA PL+ +P AVS+VCHS+ GS+LA +W R Sbjct: 91 VVGEALSTAFPLWVTIGCVLGLVRPSSFNWVTPKLSLVGLTVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPISAFLISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLMSTLQVVLFPVVGGALLNQYFQP-----LVKLVSPLMPSMAVATVAILCGNAIAQSSSAILMSGGQVILAVSLLHASGFFFGYVLARSLGLDMSSSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIYGSILAGMWRR 392
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_024632183.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Medicago truncatula]) HSP 1 Score: 204.9 bits (520), Expect = 4.800e-49 Identity = 123/303 (40.59%), Postives = 172/303 (56.77%), Query Frame = 0 Query: 104 AKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSR 407 A S FP +V + +LG RP ++ +++ LS +M+ MGMTL++DD + V G+ Q+S+MP A +S+L LP H AAG++LVGCCPGGTASN+VT LA +VALS+ MTA STL+A IMTP G L N Y P L +S + P L+ VA +CG +A ++ A+ +G ++ A LH GFFFG+++AR+LG + ++T+SIE GMQNS L VVLA PL+ +P AVS+VCHS+ GS+LA +W R Sbjct: 93 AISTAFPLWVTIGCVLGLMRPSSFNWVTDKLSIVGLSVIMLGMGMTLTLDDLRSALSMPKEVLSGFFLQYSVMPLSAFFISKLLNLPSHYAAGLILVGCCPGGTASNIVTYLARGNVALSVVMTAASTLSAVIMTPFLTAKLAGKYVAVDAAGLLISTLQVVLFPVLAGALLNQYFQP-----LVKLVSPLMPPLAVATVAVLCGNAIAQSSSAILMSGGQVILASCLLHASGFFFGYILARMLGLDVASSRTISIEVGMQNSVLGVVLAAKHFGDPLTTVPCAVSSVCHSIFGSILAGMWRR 390
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_010417455.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Camelina sativa]) HSP 1 Score: 204.5 bits (519), Expect = 6.300e-49 Identity = 123/311 (39.55%), Postives = 174/311 (55.95%), Query Frame = 0 Query: 101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412 + A S+ FP +V L LLG RP ++ ++ + T L+ M+ MGMTL++DD + + G+ Q+S+MP +S+L LPPH AAG++LVGCCPGGTASN+VT +A +VALS+ MTA ST++A IMTP G N Y L +S + P ++ VA +CG + NA A+ +G ++ A LH GFFFG+L +RLLG + ++T+SIE GMQNS L VVLA +PL+ +P AVS+VCHS+LGS LA +W R + K+ Sbjct: 94 LGEAVSIAFPVWVSLGCLLGLLRPTTFNWVTPNWTTVGLTITMLGMGMTLTLDDLRGALSMPKELFAGFVLQYSVMPLSGYFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVILLPVLAGAFLNQYF-----KKLVKFVSPVMPTIAVGTVAILCGYAIGQNASAILMSGRQVVLASCLLHTSGFFFGYLFSRLLGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSSSKQ 399
BLAST of NO05G01580 vs. NCBI_GenBank
Match: WP_099798219.1 (bile acid:sodium symporter family protein [Synechococcus lividus] >ATS17867.1 transporter [Synechococcus lividus PCC 6715]) HSP 1 Score: 204.1 bits (518), Expect = 8.300e-49 Identity = 121/296 (40.88%), Postives = 173/296 (58.45%), Query Frame = 0 Query: 109 FPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVW 405 FP +VL+ ++ P L+ +S +I L VM+ MG+TLS DF +G R VALG+ AQ+ IMPT L++RL++LPP A G++LV CCPGGTASN+V+ +A A VALS+ MT STL A ++TP GL NT + L + I+P +S L + ICG V A +A A+ GV LL A+++LH GFF G+ +AR +G++++ +T+SIE GMQNS L V LAR + +PL+ +P A+S V HS++GS+LA +W Sbjct: 11 FPLWVLITAIVALLHPPLFLWVSSDYIVWILMVVMLGMGLTLSWADFKAVGLMPRSVALGFLAQYLIMPTAGWLVARLYQLPPPFAVGLILVACCPGGTASNVVSFIARAHVALSVVMTLCSTLAAVVLTPLLTKLLAGQYVEVNAMQLFWGTVQVVLLPILVGLALNT-----KAPNLVKKVLPISPFISVLGICIICGGVFAASASAILTHGVQLLAAVISLHSIGFFGGYYIARWVGYSQRTCRTISIEVGMQNSGLGVALARQAFANPLTAVPCAISGVTHSLIGSLLAGIW 301
BLAST of NO05G01580 vs. NCBI_GenBank
Match: NP_565182.1 (Sodium Bile acid symporter family [Arabidopsis thaliana] >Q93YR2.1 RecName: Full=Probable sodium/metabolite cotransporter BASS1, chloroplastic; AltName: Full=Bile acid transporter 2; AltName: Full=Bile acid-sodium symporter family protein 1; Flags: Precursor >AAL24290.1 Unknown protein [Arabidopsis thaliana] >AAM65644.1 unknown [Arabidopsis thaliana] >AAN15343.1 Unknown protein [Arabidopsis thaliana] >AEE36121.1 Sodium Bile acid symporter family [Arabidopsis thaliana] >OAP18654.1 hypothetical protein AXX17_AT1G73210 [Arabidopsis thaliana]) HSP 1 Score: 203.8 bits (517), Expect = 1.100e-48 Identity = 123/311 (39.55%), Postives = 174/311 (55.95%), Query Frame = 0 Query: 101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412 + A S FP +V L LLG RP ++ ++ + L+ M+ MGMTL++DD + + G+ Q+S+MP A +S+L LPPH AAG++LVGCCPGGTASN+VT +A +VALS+ MTA ST++A IMTP G N Y L +S + P ++ VA +CG + NA A+ +G ++ A LH+ GF FG+L +R+LG + ++T+SIE GMQNS L VVLA +PL+ +P AVS+VCHS+LGSVLA +W R A K+ Sbjct: 93 VGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTITMLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYF-----KKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQ 398
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_010537693.1 (PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Tarenaya hassleriana]) HSP 1 Score: 203.8 bits (517), Expect = 1.100e-48 Identity = 123/308 (39.94%), Postives = 173/308 (56.17%), Query Frame = 0 Query: 106 SLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKKGA 414 S FP +V + LLG +P + ++ + L+ M+ MGMTL++DD + + G+ Q+SIMP L+S+L LP H AAG++LVGCCPGGTASN+VT +A +VALS+ MTA STL+A IMTP G N Y L +S + P ++ VA +CG + NA A+ +G ++ A LH+FGFFFG+L +R+LG + ++T+SIE GMQNS L VVLA PL+ +P AVS+VCHS+LGSVLA +W R++ +K A Sbjct: 105 STAFPIWVSVGCLLGLLKPSAFSWVTPRWTIIGLTITMLGMGMTLTLDDLRGALSMPKELLSGFVLQYSIMPMSGFLVSKLLNLPSHYAAGLILVGCCPGGTASNIVTYIARGNVALSVMMTAASTLSAVIMTPFLTAKLAGQYVTVDALGLLMSTLQVVLLPVLGGAFLNQYF-----QRLVKFVSPLMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASTLLHMFGFFFGYLFSRMLGIDVASSRTISIEVGMQNSVLGVVLATQHFGDPLTAVPCAVSSVCHSILGSVLAGIWRRDSPEKAA 407
BLAST of NO05G01580 vs. NCBI_GenBank
Match: XP_002889199.1 (probable sodium/metabolite cotransporter BASS1, chloroplastic [Arabidopsis lyrata subsp. lyrata] >EFH65458.1 bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 203.4 bits (516), Expect = 1.400e-48 Identity = 123/311 (39.55%), Postives = 173/311 (55.63%), Query Frame = 0 Query: 101 IAAAKSLYFPFYVLLAGLLGATRPQLYDCLSEMFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALLMSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTLTAGIMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLTNTYLLPSLSXXLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTLHVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLSGLPGAVSAVCHSVLGSVLAWVWSREAGKK 412 + A S FP +V L LLG RP ++ ++ + L+ M+ MGMTL+ DD + + G+ Q+S+MP A +S+L LPPH AAG++LVGCCPGGTASN+VT +A +VALS+ MTA ST++A IMTP G N Y L +S + P ++ VA +CG + NA A+ ++G ++ A LH+ GF FG+L +RLLG + ++T+SIE GMQNS L VVLA +PL+ +P AVS+VCHS+LGS LA +W R A K+ Sbjct: 91 VGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIAGLTITMLGMGMTLTFDDLRGAFSMPKELFAGFVLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYF-----QKLVKFVSPVMPPVAVGTVAILCGYAIGQNASAILRSGKQVVLASCLLHISGFLFGYLFSRLLGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSALAGIWRRSAPKQ 396 The following BLAST results are available for this feature:
BLAST of NO05G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01580 ID=NO05G01580|Name=NO05G01580|organism=Nannochloropsis oceanica|type=gene|length=1375bpback to top protein sequence of NO05G01580.1 >NO05G01580.1-protein ID=NO05G01580.1-protein|Name=NO05G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bpback to top Synonyms
Publications
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