NO05G01490, NO05G01490 (gene) Nannochloropsis oceanica

Overview
NameNO05G01490
Unique NameNO05G01490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1904
Alignment locationchr5:422317..424220 +

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquinone/menaquinone biosynthesis C-methyltransferase UbiE
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:422317..424220 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of NO05G01490 vs. NCBI_GenBank
Match: EWM28276.1 (putative ubiquinone menaquinone biosynthesis methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 474.6 bits (1220), Expect = 2.300e-130
Identity = 216/262 (82.44%), Postives = 240/262 (91.60%), Query Frame = 0
Query:   38 MSSSDT--AKVPIVEYCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            MSSS+    KVPIV+YCPPS+F TDMKVLKHMWFAKIVPGQSQQDRLESFYK QADLYDSYRFRMLH R+PM+KAMP+PPKG+GVWLD+GGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQA+ERV RH GWS FV+VIVADACD +A  LP  GSVD+ITFSYALSMIPDW+AAL NAKRLLKKGGH+CVCDFTVD +QGWGMQT W+ +FASDHVYLR E RPFLRE+F +VH+ELGFGTFPYVPPV++APWYVF+G+K
Sbjct:    1 MSSSNAPQIKVPIVDYCPPSTFGTDMKVLKHMWFAKIVPGQSQQDRLESFYKEQADLYDSYRFRMLHGRLPMVKAMPIPPKGEGVWLDVGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAQERVARHAGWSEFVKVIVADACDAEAPGLPSPGSVDLITFSYALSMIPDWEAALRNAKRLLKKGGHVCVCDFTVDNSQGWGMQTFWANVFASDHVYLRPERRPFLREEFVSVHEELGFGTFPYVPPVLQAPWYVFIGRK 262          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: XP_005829451.1 (hypothetical protein GUITHDRAFT_111444 [Guillardia theta CCMP2712] >EKX42471.1 hypothetical protein GUITHDRAFT_111444 [Guillardia theta CCMP2712])

HSP 1 Score: 266.5 bits (680), Expect = 9.700e-68
Identity = 138/272 (50.74%), Postives = 184/272 (67.65%), Query Frame = 0
Query:   30 CLVPRSFTMSSSDTAKVPIVEYCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNH--FAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDETQG-WGM-QTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            C+ P    M  S    +P  E+   ++F+ DM+VLK MWF+KI  G + QD LESFY  QA LYD YR RMLHAR PM+K + +      VW+D+GGGTGS++EY +  L+   F+ V+VLDLCPSL   AEER K+ PG    V+ ++ DAC++    LPPAGS D++TFSY+L MIPDWK A+ANA RLL+ GG LCVCDFTV   +G W + Q MW +IFA DHV+L  EH  +L+   +   ++ GFG+FPYV P+++A WY +VG+K
Sbjct:   55 CVSPSK--MQKSQFVCLPFSEFNVQNNFSEDMQVLKSMWFSKI-SGSAHQDILESFYSPQAKLYDGYRSRMLHARPPMMKNLSI------VWVDLGGGTGSSVEYMSNALDEGWFSSVVVLDLCPSLHKIAEERAKKWPG---IVKAVLGDACNQNEEGLPPAGSCDLVTFSYSLVMIPDWKGAIANALRLLRPGGRLCVCDFTVLPQKGQWTVTQEMWKRIFARDHVHLSDEHLKYLKSVTEPEKEDCGFGSFPYV-PLLKAGWYWYVGKK 313          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: SFH83924.1 (S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase [Planctomicrobium piriforme])

HSP 1 Score: 201.1 bits (510), Expect = 5.000e-48
Identity = 105/251 (41.83%), Postives = 151/251 (60.16%), Query Frame = 0
Query:   55 SSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTV--------DETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            ++   D+K L H+  A+   G + Q+RLESFY  QA+ YD +R RMLH+R  MI+++P+P    GVW+D+G GTG N E+    +N  +K+ ++DL  SL  QA+ RV+   GW + V V     C +    +PP GSVDV+TFSY+L+MIPDW  A+ +A  LLK GG + + DF V            GW  +T W   F SD+V+L  +H P+L+ +F+ V      G  PY+ P +RAP YVF+G+K
Sbjct:    2 ANVVNDLKTLWHL-VARRASGSTHQERLESFYSGQANGYDDFRRRMLHSRQEMIQSVPVPQ--GGVWVDLGAGTGENAEHLGPRINDLSKMYLVDLSTSLLEQAQARVQAR-GWQNVVPV-----CHDATTFVPPEGSVDVVTFSYSLTMIPDWFRAMDHAYSLLKPGGSIGIVDFFVARKYPGDGHTPHGWSTRTFWPPWFGSDNVFLSPDHIPYLKNKFETVMLSERRGKIPYL-PFVRAPHYVFIGKK 242          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_092048370.1 (class I SAM-dependent methyltransferase [Planctomicrobium piriforme])

HSP 1 Score: 199.5 bits (506), Expect = 1.500e-47
Identity = 105/245 (42.86%), Postives = 148/245 (60.41%), Query Frame = 0
Query:   61 MKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTV--------DETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            MK L H+  A+   G + Q+RLESFY  QA+ YD +R RMLH+R  MI+++P+P    GVW+D+G GTG N E+    +N  +K+ ++DL  SL  QA+ RV+   GW + V V     C +    +PP GSVDV+TFSY+L+MIPDW  A+ +A  LLK GG + + DF V            GW  +T W   F SD+V+L  +H P+L+ +F+ V      G  PY+ P +RAP YVF+G+K
Sbjct:    1 MKTLWHL-VARRASGSTHQERLESFYSGQANGYDDFRRRMLHSRQEMIQSVPVPQ--GGVWVDLGAGTGENAEHLGPRINDLSKMYLVDLSTSLLEQAQARVQAR-GWQNVVPV-----CHDATTFVPPEGSVDVVTFSYSLTMIPDWFRAMDHAYSLLKPGGSIGIVDFFVARKYPGDGHTPHGWSTRTFWPPWFGSDNVFLSPDHIPYLKNKFETVMLSERRGKIPYL-PFVRAPHYVFIGKK 235          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_105333584.1 (class I SAM-dependent methyltransferase [Blastopirellula marina] >PQO48057.1 SAM-dependent methyltransferase [Blastopirellula marina])

HSP 1 Score: 194.5 bits (493), Expect = 4.700e-46
Identity = 106/248 (42.74%), Postives = 148/248 (59.68%), Query Frame = 0
Query:   58 ATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDE--------TQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            ++D+KVL H+   K V G+S  +RLESFY  QA+ YD +R R+L  R  M   + LPP  +GVW+D+GGGTGSNLEY  +++     V V+DL  SL    +ER+K   GW    + + ADA        P  G+ DV+TFSY+L+MIPDW AA+ NA R+LK GG + V DF V            GW  +  W   F+SD+V+  A+H P+L+ QF+ V  E      PY+ P++R P+Y F+G+K
Sbjct:    4 SSDLKVLYHL-AVKPVRGKSHAERLESFYGGQAEAYDDFRKRLLQGREEMYGKLELPP--EGVWVDMGGGTGSNLEYRGDDIPKMKSVYVVDLAGSLLKVCDERIKAR-GWDGVAKTVEADA----TKFTPEEGAADVVTFSYSLTMIPDWFAAIDNALRILKPGGLIGVVDFYVSRKYPQEGRAQHGWFNRNFWPVWFSSDNVHPSADHLPYLQRQFETVQLEERRAKVPYL-PLVRTPYYYFIGRK 242          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_105354654.1 (class I SAM-dependent methyltransferase [Blastopirellula marina] >PQO35549.1 SAM-dependent methyltransferase [Blastopirellula marina] >PTL44188.1 class I SAM-dependent methyltransferase [Blastopirellula marina])

HSP 1 Score: 194.1 bits (492), Expect = 6.100e-46
Identity = 106/248 (42.74%), Postives = 148/248 (59.68%), Query Frame = 0
Query:   58 ATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDE--------TQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            ++D+KVL H+   K V G+S  +RLESFY  QA+ YD +R R+L  R  M   + LPP  +GVW+D+GGGTGSNLEY  +++     V V+DL  SL    +ER+K   GW    + + ADA        P  G+ DV+TFSY+L+MIPDW AA+ NA R+LK GG + V DF V            GW  +  W   F+SD+V+  A+H P+L+ QF +V  E      PY+ P++R P+Y F+G+K
Sbjct:    4 SSDLKVLYHL-AVKPVRGKSHAERLESFYGGQAEAYDDFRKRLLQGREEMYGKLELPP--EGVWVDMGGGTGSNLEYRGDDIPKMKSVYVVDLAGSLLKVCDERIKAR-GWDGVAKTVEADA----TKFTPEEGAADVVTFSYSLTMIPDWFAAIDNALRILKPGGLIGVVDFYVSRKYPQEGRAQHGWFNRNFWPVWFSSDNVHPSADHLPYLQRQFDSVQLEERRAKVPYL-PLVRTPYYYFIGRK 242          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_002655451.1 (class I SAM-dependent methyltransferase [Blastopirellula marina] >EAQ82581.1 probable ubiquinone/menaquinone biosynthesis methyltransferase [Blastopirellula marina DSM 3645])

HSP 1 Score: 189.9 bits (481), Expect = 1.100e-44
Identity = 105/248 (42.34%), Postives = 147/248 (59.27%), Query Frame = 0
Query:   58 ATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDE--------TQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            A+D+KVL H+   K V G++  +RLESFY  QA+ YD +R R+L  R  M  ++ LP    GVW+D+GGGTGSNLEY  +++     V V+DL  SL    +ER++   GW +  + + ADA        P  G  DV+TFSY+L+MIPDW AA+ NA R+LK GG + V DF V            GW  +  W   F+SD+V+  A+H P+L+ QF+ V  E      PY+ P++R P+Y FVG+K
Sbjct:    4 ASDLKVLYHL-AVKPVRGENHAERLESFYGGQAEAYDDFRKRLLQGRQEMYASLDLPE--GGVWVDMGGGTGSNLEYRGDDIPKMKSVYVVDLASSLLKVCDERIQAR-GWETSAKTVEADA----TKFTPEEGLADVVTFSYSLTMIPDWFAAMDNALRILKPGGLIGVVDFYVSRKYPHEGRTQHGWFNRNFWPVWFSSDNVHPSADHLPYLQRQFETVTLEERRAKVPYL-PLVRTPYYYFVGRK 242          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_007331853.1 (class I SAM-dependent methyltransferase [Rhodopirellula baltica] >EKK02675.1 protein containing Methyltransferase type 11 domain protein [Rhodopirellula baltica SH28])

HSP 1 Score: 187.2 bits (474), Expect = 7.500e-44
Identity = 108/256 (42.19%), Postives = 149/256 (58.20%), Query Frame = 0
Query:   50 EYCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTV--------DETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            E   P+S   D+KVL H+ F + V G +  +RLESFY+ QA  YDS+R R+LH R  ++  +  P    GVW+D G GTG NL    E     A+V ++DL PSL   A ER++      S V +  ADA   +     P  SVDV+TFSY+L+MIPDW  ++  A+R+LK GG + V DF V            GW  +T WS  FASD+VYL ++H   LR QFK    E   G+ PY+ P+++AP+Y+F+G+K
Sbjct:    3 EVIKPTSRFGDLKVLWHLLF-RPVRGNTHGERLESFYEGQASHYDSFRARLLHGRSELMSCVDFP--DNGVWVDFGAGTGHNLFSIEERSKSLAEVHLVDLSPSLLQIASERIEERQ--LSNVTLHHADATQFEL----PENSVDVVTFSYSLTMIPDWFESVLIARRILKPGGMIAVTDFHVSRKHAAAPSRQHGWLRRTFWSLWFASDNVYLSSDHLAMLRRQFKTERCEERLGSVPYM-PLVKAPYYLFLGRK 248          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_007338907.1 (class I SAM-dependent methyltransferase [Rhodopirellula baltica] >ELP31957.1 protein containing Methyltransferase type 11 domain protein [Rhodopirellula baltica SWK14])

HSP 1 Score: 185.7 bits (470), Expect = 2.200e-43
Identity = 108/256 (42.19%), Postives = 149/256 (58.20%), Query Frame = 0
Query:   50 EYCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTV--------DETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            E   P+S   D+KVL H+ F + V G +  +RLESFY+ QA  YDS+R R+LH R  ++  +  P    GVW+D G GTG NL    E     A+V ++DL PSL   A ER++      S V +  ADA   +     P  SVDV+TFSY+L+MIPDW  ++  A+R+LK GG + V DF V            GW  +T WS  FASD+VYL ++H   LR QFK    E   G+ PY+ P+++AP+Y+F+G+K
Sbjct:    3 EVIKPTSRFDDLKVLWHLLF-RPVRGNTHGERLESFYEGQASHYDSFRARLLHGRSELMSWVDFP--DNGVWVDFGAGTGHNLFSIEERSKSLAEVHLVDLSPSLLQIASERIEERQ--LSNVTLHHADATQFEL----PDNSVDVVTFSYSLTMIPDWFESVLIARRILKPGGVIAVTDFHVSRKHAAAPSRQHGWLRRTFWSLWFASDNVYLSSDHLAMLRRQFKTERCEERLGSVPYM-PLVKAPYYLFLGRK 248          
BLAST of NO05G01490 vs. NCBI_GenBank
Match: WP_075082468.1 (class I SAM-dependent methyltransferase [Mariniblastus fucicola])

HSP 1 Score: 185.7 bits (470), Expect = 2.200e-43
Identity = 104/249 (41.77%), Postives = 148/249 (59.44%), Query Frame = 0
Query:   57 FATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRMLHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDLCPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSYALSMIPDWKAALANAKRLLKKGGHLCVCDFTVD--------ETQGWGMQTMWSKIFASDHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQK 298
            F +DMK+L HM   K V G     R+ESFY  QA  YD +R R+L  R  + + +  P    GVW+D+GGGTG+N+E  A+++   +KV V+DL  SL   A +R ++  GW +  Q + ADA   +    PP G  DV+TFSY+L+MIPDW AA+ NA R+LK GG + V DF V         + Q W  +T+W   FA+D+V+   +H PFL ++F+ VH        PYV P++R P+Y F+G+K
Sbjct:    3 FFSDMKILYHM-LVKPVRGDDHAQRMESFYGGQAKNYDDFRRRLLRGREELYQKIDKP--AGGVWVDMGGGTGANIENLADSIEQLSKVYVVDLSESLLKIATDRFEK-KGWGN-AQSVCADATKWQ----PPEGQADVVTFSYSLTMIPDWFAAIENALRMLKPGGLIGVVDFYVGRKYPPESLKKQKWLSRTLWQPWFATDNVFPSPDHLPFLMDRFEKVHLLEDRFRMPYV-PLLRTPYYQFIGRK 241          
The following BLAST results are available for this feature:
BLAST of NO05G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28276.12.300e-13082.44putative ubiquinone menaquinone biosynthesis methy... [more]
XP_005829451.19.700e-6850.74hypothetical protein GUITHDRAFT_111444 [Guillardia... [more]
SFH83924.15.000e-4841.83S-adenosylmethionine-diacylgycerolhomoserine-N-met... [more]
WP_092048370.11.500e-4742.86class I SAM-dependent methyltransferase [Planctomi... [more]
WP_105333584.14.700e-4642.74class I SAM-dependent methyltransferase [Blastopir... [more]
WP_105354654.16.100e-4642.74class I SAM-dependent methyltransferase [Blastopir... [more]
WP_002655451.11.100e-4442.34class I SAM-dependent methyltransferase [Blastopir... [more]
WP_007331853.17.500e-4442.19class I SAM-dependent methyltransferase [Rhodopire... [more]
WP_007338907.12.200e-4342.19class I SAM-dependent methyltransferase [Rhodopire... [more]
WP_075082468.12.200e-4341.77class I SAM-dependent methyltransferase [Marinibla... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003723NSK003723Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01490.1NO05G01490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO05G01490.2NO05G01490.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583889gene_2937Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g72gene2330Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01490.1NO05G01490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO05G01490.2NO05G01490.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01490 ID=NO05G01490|Name=NO05G01490|organism=Nannochloropsis oceanica|type=gene|length=1904bp
ATGCGGACACGACTTCTGCGAGGCTCGGACCCGCGTTACGGCTTCAAGTA
CTACGCGAAGCCATTTCCTGCCACGCGCAGgtctgttagacgacgcttag
cgcaatgcgagcaccgatgccatattaccctcccctcccctccccccttc
cccccccctttctctacgcagCACAGGCTGCCTGGTCCCTCGCTCCTTTA
CCATGTCTAGCAGCGATACAGCCAAGGTTCCCATTGTGGAGTACTGTCCA
CCATCATCCTTCGCTACGGACATGAAGGTTTTAAAGCACATGTGGTTTGC
AAAGATCGTTCCGGGGCAATCGCAGCAGGACCGGgtacgtgtcttggctg
ggttcgagtcgggtttctgtaagtcgccttccccccccctccctaaattc
tgggtattacacaatgtatcattttaactccctccgctcgccctaccttc
ccaagccttcctcttattcattccctttcgtccttcgaacgccccaccac
cctcataccaacgcagCTCGAATCCTTCTACAAACACCAAGCCGACCTGT
ATGACTCCTATCGTTTTCGGATGCTGCACGCTCGCATGCCAATGATTAAG
GCCATGCCCCTCCCTCCCAAAGGCAAGGGTGTATGGTTGGACATTGGAGG
AGgtaagcttatcgttttcgggacgaagagtggtgtaacaaggattggca
aaggctcgttatcaacgatgatacgtacacacatgtagGCACCGGCTCGA
ATCTCGAGTATTTCGCGGAGAATTTGAATCATTTTGCCAAGGTCATGGTG
TTGGATTTGTGCCCTTCCTTGGCGGCGCAGGCCGAAGAGAGGGTGAAGCG
GCATCCGGGATGGAGTTCCTTCGTCCAGgtaggtgatgggcagtgggccc
cttacgacgcccaacaattgcattttgtggatttacaatgcacagggagg
aaatgggagagcaggtgagggcgagtgagttcctcttggagagatgccaa
gaaggcttagtaagcaaagcctcagctccctcgtcccctccctttttcct
ttcctcccctcccattctcctttccgtcatcgctgcggactcctgtgtca
agggaaaaacaagacctccttccaccgatataatggacgtcgttcctttg
cgaagagccttgtaattaaccctccctcgctccccccccccccccctaaa
gGTCATCGTCGCCGATGCTTGCGACGAAAAAGCTGTCAGTCTCCCGCCCG
CCGGCTCCGTGGACGTCATCACCTTTTCCTATGCTTTGTCCATGATTCCT
GACTGGAAAGCAGCCCTCGCCAATGCCAAGAGGCTGTTGAAAAAAGGTAG
GGAGGGGAGTGGGAGGAAATGAGGATAGAAGGAAAGGCGGGGTACGTCAT
TTGTTTTTAGGAACCAAGAGCCAATTACCGAAGATCTCATCTCTTATTTC
TTCTTCTTTTCCTTCATCAATTCTTCTTTATCACCTTTTCCCTTTTTTTT
CTTTTTCTTTCTTTGTTTCTTTTTTGCGACTCATATTTGTCAAACACCCA
GGCGGCCATCTATGCGTGTGTGATTTCACGGTGGACGAGACACAGGGATG
GGGAATGCAAACAATGTGGAGTAAGATCTTCGCATCCGACCATGTATATT
TACGCGCAGAGCACCGGCCGTTTCTGAGGGAGCAGTTTAAGGCCGTCCAT
GATGAGTTGGGCTTCGGCACATTCCCCTATGTCCCACCTGTAATGCGTGC
GCCGTGGTACGTGTTTGTGGGGCAAAAGGTGTGAGGGATGAAAGGAAAAA
CACGGGGCAGTGGGAAATGCAAGGCGATGAATGCTTCGGAAAGTAACGAG
AAAAAGAAGAAGAGAGTGGCGGCATGTCCGAATTATTCGGAGCTTTATTC
AAAA
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protein sequence of NO05G01490.1

>NO05G01490.1-protein ID=NO05G01490.1-protein|Name=NO05G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MRTRLLRGSDPRYGFKYYAKPFPATRSTGCLVPRSFTMSSSDTAKVPIVE
YCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRM
LHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDL
CPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSY
ALSMIPDWKAALANAKRLLKKGGHLCVCDFTVDETQGWGMQTMWSKIFAS
DHVYLRAEHRPFLREQFKAVHDELGFGTFPYVPPVMRAPWYVFVGQKV*
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protein sequence of NO05G01490.2

>NO05G01490.2-protein ID=NO05G01490.2-protein|Name=NO05G01490.2|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MRTRLLRGSDPRYGFKYYAKPFPATRSTGCLVPRSFTMSSSDTAKVPIVE
YCPPSSFATDMKVLKHMWFAKIVPGQSQQDRLESFYKHQADLYDSYRFRM
LHARMPMIKAMPLPPKGKGVWLDIGGGTGSNLEYFAENLNHFAKVMVLDL
CPSLAAQAEERVKRHPGWSSFVQVIVADACDEKAVSLPPAGSVDVITFSY
ALSMIPDWKAALANAKRLLKKGREGSGRK*
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