NO05G01340, NO05G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01340 vs. NCBI_GenBank
Match: EWM28262.1 (Brix domain protein [Nannochloropsis gaditana]) HSP 1 Score: 525.0 bits (1351), Expect = 1.500e-145 Identity = 253/291 (86.94%), Postives = 275/291 (94.50%), Query Frame = 0 Query: 1 MSTLRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDRATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 MST+RRQTRLRKEYLYRKSLEGKEK+AYERK+ IR ALQEGKPIPTELRGEE + RHE+ LED+ T+ P +H+DDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFP+AQAVNRGNTKVPELVEACRTHDFTDIV+VQETRGQPDGLLVCHLPLGPTAYFT+SNVVMRHDIEDRA VSEAYPHLI EGF S+LG+RVADILK+TFPAP+ ++RVVTFANEDD IVFRHHTFEKAPG KGEVTLKE+GPRFDLT+FQVKLGTLEQ DAETE+VFRPYMNTAKKRR+L Sbjct: 43 MSTIRRQTRLRKEYLYRKSLEGKEKAAYERKQQIRNALQEGKPIPTELRGEEGNWRHEINLEDDITARPHNHIDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPNAQAVNRGNTKVPELVEACRTHDFTDIVVVQETRGQPDGLLVCHLPLGPTAYFTISNVVMRHDIEDRAAVSEAYPHLILEGFVSTLGRRVADILKFTFPAPRPASQRVVTFANEDDHIVFRHHTFEKAPGTKGEVTLKEIGPRFDLTVFQVKLGTLEQTDAETEFVFRPYMNTAKKRRLL 333
BLAST of NO05G01340 vs. NCBI_GenBank
Match: OAE26357.1 (hypothetical protein AXG93_4324s1240 [Marchantia polymorpha subsp. ruderalis] >PTQ42162.1 hypothetical protein MARPO_0031s0129 [Marchantia polymorpha]) HSP 1 Score: 397.1 bits (1019), Expect = 4.600e-107 Identity = 188/291 (64.60%), Postives = 238/291 (81.79%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 +RR TRLR+EYLYRKSLEGKE++ YE+KR IR AL+EGKPIPTELR EEA+LR E+ LED+ T+ R+H+DDEY A +DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG + E+VE+CR+HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+ T+SEAYPHLI E F++ LGQR A+ILKY FP PKA+TKR++T AN D I FRHH +EK GVK + LKEVGPRF+L L+Q+KLGT++QA+A+ E+V RPYMN+++KR L Sbjct: 2 IRRTTRLRREYLYRKSLEGKERTLYEKKRKIRLALEEGKPIPTELRNEEAALREEIDLEDDNTAELRTHIDDEYAHADEKDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISEIVESCRSHDFTDIIMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKQTLGTMSEAYPHLILENFSTKLGQRTANILKYLFPEPKADTKRIITMANSADYISFRHHVYEKPAGVK-SIELKEVGPRFELRLYQIKLGTMDQAEAQNEWVIRPYMNSSRKRTAL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: GAQ87625.1 (IMP4 [Klebsormidium nitens]) HSP 1 Score: 395.6 bits (1015), Expect = 1.300e-106 Identity = 191/291 (65.64%), Postives = 235/291 (80.76%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDRA---TVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 LRR RLR+EYLYRKSLEGKE++ YERKR IR AL EGKPIPTELR EEA+LR E+ LED+ T+ R+H+DDEY AG RDPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG + ++VEACR++DFTDIVMV E RG+PDGL+VCHLP GPTAYF LSNVV RHDI+DRA T+SEA+PHLI F + LG R +ILK+ FP PK E+KR++TFAN+ D I FRHH +EK G K V LKEVGPRF+L L+QVKLGT++Q++AE E+V RPYMN+A+KR L Sbjct: 2 LRRNARLRREYLYRKSLEGKERAVYERKRKIREALAEGKPIPTELRNEEAALRQEIELEDDVTAEQRTHIDDEYARAGERDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRINRGGQVISQIVEACRSNDFTDIVMVHEHRGEPDGLVVCHLPFGPTAYFGLSNVVTRHDIKDRAAVGTMSEAFPHLILNNFNTKLGLRTQNILKFLFPVPKDESKRIITFANQSDYISFRHHIYEKPKGAK-SVELKEVGPRFELRLYQVKLGTMDQSEAEDEWVIRPYMNSARKRTAL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_009415771.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 391.3 bits (1004), Expect = 2.500e-105 Identity = 184/291 (63.23%), Postives = 235/291 (80.76%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 LRR TRLR+EYLYRKSLEGKE+ YE+KR IR AL+EGKPIPTELR EEA+LR E+ LEDE T+ PR+H+DDEY A +DP++ +TTSR+PS L QF+KE+K++FP++ +NRG + E++E+CR H+FTD+V+V E RGQPDGL+VCHLP GPTAYF L NVV RHDI+D+ T+SEAYPHLI + FTS LGQR A+ILK+ FP PK ++KR++TFAN+ D I FRHH +EK G K V LKEVGPRF+L L+Q+KLGT++Q++A+ E+V RPYMNTAKKR +L Sbjct: 2 LRRNTRLRREYLYRKSLEGKEREYYEKKRKIREALEEGKPIPTELRNEEAALRQEIDLEDEYTAVPRTHIDDEYATASEKDPRILLTTSRNPSQPLTQFVKELKIVFPNSTRMNRGGQVISEIIESCRAHEFTDVVLVHEHRGQPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKAVGTMSEAYPHLILDNFTSKLGQRTANILKHLFPEPKPDSKRIITFANQSDYISFRHHVYEKRGGPK-SVELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKRNVL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_006836257.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Amborella trichopoda] >ERM99110.1 hypothetical protein AMTR_s00101p00134540 [Amborella trichopoda]) HSP 1 Score: 391.0 bits (1003), Expect = 3.300e-105 Identity = 186/291 (63.92%), Postives = 234/291 (80.41%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 LRR RLR+EYLYRK+LEGKE+ YE+KR IR AL+EGKPIPTELR EE +LRHE+ LED+ T+ ++HVDDEY A DPK+ +TTSRDPSSRL QF+KE+K +FP+AQ +NRGN + E+VE CRTHDFTDIVMV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+ T+SEAYPHLI F+S LG+R A+ILK+ FP PK ++KR++TFAN+ D I FRHH ++K G K + LKEVGPRF+L L+Q+KLGT++Q++A+ E+V RPYMNTAKK++ L Sbjct: 2 LRRNIRLRREYLYRKNLEGKERLLYEKKRKIRKALEEGKPIPTELRKEEFALRHEIDLEDDQTAVQKTHVDDEYANASEMDPKILLTTSRDPSSRLSQFVKELKFVFPNAQRMNRGNQVISEIVETCRTHDFTDIVMVHEHRGEPDGLIVCHLPFGPTAYFGLLNVVTRHDIKDKKVIGTMSEAYPHLILHNFSSKLGERTANILKHLFPVPKPDSKRIITFANQSDYISFRHHVYQKDGGPK-SIELKEVGPRFELRLYQIKLGTVDQSEAQNEWVIRPYMNTAKKQKAL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_002990678.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Selaginella moellendorffii] >EFJ08310.1 hypothetical protein SELMODRAFT_185462 [Selaginella moellendorffii]) HSP 1 Score: 390.6 bits (1002), Expect = 4.300e-105 Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 +RR RLR+EYLYRKSLEGKE+ YE+KR I+ ALQEGKP+PTELR +EASLR E+ LEDE T+ P +HVDDEY AG DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG + E+VE+CR HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+ T+SEAYPHLI F + LG R ++ILKY FP PK ++KR++TFAN+ D I FRHH +EK GVK + LKEVGPRF+L L+Q+KLGT++Q +A+ E+V RPYMN+++KR L Sbjct: 2 IRRNARLRREYLYRKSLEGKEREVYEKKRKIKQALQEGKPLPTELRNDEASLRQEIDLEDENTAEPTTHVDDEYAYAGEVDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVK-SIELKEVGPRFELRLYQIKLGTVDQVEAQNEWVIRPYMNSSRKRAAL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_024529370.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Selaginella moellendorffii]) HSP 1 Score: 389.4 bits (999), Expect = 9.700e-105 Identity = 183/291 (62.89%), Postives = 232/291 (79.73%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 +RR RLR+EYLYRKSLEGKE+ YE+KR I+ ALQEGKP+PTELR +EASLR E+ LED+ T+ P +HVDDEY AG DPK+ +TTSRDPSSRL QF+KE+K++FP+AQ +NRG + E+VE+CR HDFTDI+MV E RG+PDGL+VCHLP GPTAYF L NVV RHDI+D+ T+SEAYPHLI F + LG R ++ILKY FP PK ++KR++TFAN+ D I FRHH +EK GVK + LKEVGPRF+L L+Q+KLGT++Q +A+ E+V RPYMN+++KR L Sbjct: 2 IRRNARLRREYLYRKSLEGKEREVYEKKRKIKQALQEGKPLPTELRNDEASLRQEIDLEDDNTAEPTTHVDDEYAYAGEVDPKILLTTSRDPSSRLTQFVKELKIVFPNAQRMNRGGQVIAEIVESCRAHDFTDIIMVHEHRGEPDGLIVCHLPYGPTAYFGLMNVVTRHDIKDKKGLGTMSEAYPHLILNNFNTKLGMRTSNILKYLFPVPKPDSKRLITFANQQDYISFRHHVYEKQGGVK-SIELKEVGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMNSSRKRAAL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: XP_006438885.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Citrus clementina] >XP_006482988.1 PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Citrus sinensis] >ESR52125.1 hypothetical protein CICLE_v10032276mg [Citrus clementina]) HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104 Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 LRR RLR+EYLYRKSLEGKE+ YE+KR I+ ALQEGKPIPTELR EEA+LR E+ LEDE T+ PRSH+DDEY A RDPK+ +TTSRDPS+ L QF+KE+K +FP+AQ +NRG + E++E CR H+FTD+V+V E RG PDGL++CHLP GPTAYF L NVV RHDI+DR T+ EAYPHLI + F S LG+R A+ILK+ FP PKA+TKR++TFAN+ D I FRHH +EK G K + LKE+GPRF+L L+Q+KLGT++Q++A+ E+V RPYMNT+KKR+ L Sbjct: 2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKAIGTMPEAYPHLILDNFKSKLGERTANILKHLFPVPKADTKRIITFANQSDYISFRHHIYEKQGGPK-SLELKEIGPRFELRLYQIKLGTVDQSEAQIEWVIRPYMNTSKKRKFL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: KDO83212.1 (hypothetical protein CISIN_1g022723mg [Citrus sinensis]) HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104 Identity = 184/291 (63.23%), Postives = 232/291 (79.73%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRML 292 LRR RLR+EYLYRKSLEGKE+ YE+KR I+ ALQEGKPIPTELR EEA+LR E+ LEDE T+ PRSH+DDEY A RDPK+ +TTSRDPS+ L QF+KE+K +FP+AQ +NRG + E++E CR H+FTD+V+V E RG PDGL++CHLP GPTAYF L NVV RHDI+DR T+ EAYPHLI + F S LG+R A+ILK+ FP PKA+TKR++TFAN+ D I FRHH +EK G K + LKE+GPRF+L L+Q+KLGT++Q++A+ E+V RPYMNT+KKR+ L Sbjct: 2 LRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFPVPKADTKRIITFANQSDYISFRHHIYEKQGGPK-SLELKEIGPRFELRLYQIKLGTVDQSEAQIEWVIRPYMNTSKKRKFL 291
BLAST of NO05G01340 vs. NCBI_GenBank
Match: PRW44924.1 (U3 small nucleolar ribonucleo IMP4 [Chlorella sorokiniana]) HSP 1 Score: 388.3 bits (996), Expect = 2.200e-104 Identity = 189/290 (65.17%), Postives = 230/290 (79.31%), Query Frame = 0 Query: 4 LRRQTRLRKEYLYRKSLEGKEKSAYERKRLIRTALQEGKPIPTELRGEEASLRHEVGLEDEATSTPRSHVDDEYGLAGTRDPKVCVTTSRDPSSRLKQFMKEVKLIFPSAQAVNRGNTKVPELVEACRTHDFTDIVMVQETRGQPDGLLVCHLPLGPTAYFTLSNVVMRHDIEDR---ATVSEAYPHLIFEGFTSSLGQRVADILKYTFPAPKAETKRVVTFANEDDQIVFRHHTFEKAPGVKGEVTLKEVGPRFDLTLFQVKLGTLEQADAETEYVFRPYMNTAKKRRM 291 LRR RLRKE+LYRKSLEGKEK YE+KR IR AL+EGKPIPTELR EEA LR +V LED+ T+ PR+H+DDEY AG RDPK+ +TTSRDPSSRL QF KEVKL+FP+AQ VNRG+ V ELVE+CR HD+TD++MV E RG+PDGL+VCHLP GPTAYF + N V+RHDI D+ T+SEAYPHLIF+ F+S LGQRV+ ILKY FP PK ++KRV+TFAN+ D I FRHHT+E G K + LKE GPRF++ L+Q+KLGTL+Q AETE+ R Y +AKK ++ Sbjct: 2 LRRNARLRKEFLYRKSLEGKEKELYEKKRKIRQALEEGKPIPTELRREEAELRKQVELEDDNTAVPRTHIDDEYAHAGERDPKILITTSRDPSSRLVQFAKEVKLLFPNAQRVNRGSMVVGELVESCRAHDYTDLIMVHEHRGEPDGLVVCHLPYGPTAYFGVFNTVLRHDIGDKKQVGTISEAYPHLIFDRFSSKLGQRVSSILKYLFPPPKHDSKRVITFANQSDFISFRHHTYEMPKGAK-SIQLKECGPRFEMKLYQIKLGTLDQPHAETEWALRSYTRSAKKSKL 290 The following BLAST results are available for this feature:
BLAST of NO05G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01340 ID=NO05G01340|Name=NO05G01340|organism=Nannochloropsis oceanica|type=gene|length=876bpback to top protein sequence of NO05G01340.1 >NO05G01340.1-protein ID=NO05G01340.1-protein|Name=NO05G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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