NO05G01100, NO05G01100 (gene) Nannochloropsis oceanica

Overview
NameNO05G01100
Unique NameNO05G01100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1014
Alignment locationchr5:325293..326306 +

Link to JBrowse

Properties
Property NameValue
DescriptionWD40 repeat containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:325293..326306 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0031929TOR signaling
GO:0032008positive regulation of TOR signaling
GO:0007165signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0031932TORC2 complex
GO:0031931TORC1 complex
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinonprotein_ADH-like_supfam
IPR017986WD40_repeat_dom
IPR037588MLST8
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
Homology
BLAST of NO05G01100 vs. NCBI_GenBank
Match: EWM28213.1 (WD40 repeat containing protein [Nannochloropsis gaditana])

HSP 1 Score: 470.7 bits (1210), Expect = 3.800e-129
Identity = 277/336 (82.44%), Postives = 293/336 (87.20%), Query Frame = 0
Query:    1 MSSAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWNVAKWEMEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSNLAVTCVALNDAQ 337
            MSSAVVLATAGYDHKIRFWEAPTGVC+RSIRYPDSQVNCLQITPDKQFL AGGNPHVRLFEVGGNANPNPV+SYEGH GNVMAVGFQQ+GKWLYTASEDGTVK+WD RA GCQR+ +N                             AVNSVVLHPNQAE+VTGDQEGRVRVWDLGSNRCVHET PEG+VPVRSVSV+NDASLIAAGNN+A+LYVW  QEG+ + YF+RP H QPVKTHAR+LLKCAFSPDSQRLVTTSADKTAKLWNV KWE+EH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSNLAVTCVALNDAQ
Sbjct:    1 MSSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQVNCLQITPDKQFLAAGGNPHVRLFEVGGNANPNPVVSYEGHVGNVMAVGFQQDGKWLYTASEDGTVKLWDTRASGCQRTLENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNSVVLHPNQAELVTGDQEGRVRVWDLGSNRCVHETLPEGSVPVRSVSVANDASLIAAGNNQANLYVWHYQEGSPDAYFSRPAHVQPVKTHARFLLKCAFSPDSQRLVTTSADKTAKLWNVRKWEVEHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSNLAVTCVALNDAQ 336          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: ORX80649.1 (WD40 repeat-like protein [Anaeromyces robustus])

HSP 1 Score: 274.6 bits (701), Expect = 4.000e-70
Identity = 128/266 (48.12%), Postives = 172/266 (64.66%), Query Frame = 0
Query:    2 SSAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLW 268
            S+ VVLATAGYDH IRFWEA +G+C R++++PDSQVN L I+PDK++L A GNPHVRL+EV  N NPNPV S++GH GNV A+ +Q  G+W+ T SEDGT+K+WD+RAPG QR ++                             V VN V++HPNQ E+V+ DQ G ++VWDL  N C HE  PE +VP RSVS++ D S++   NN+ + YVW+ +E   +G        Q V  H++Y+ KC  SPD++ L T SAD T K+W
Sbjct:    7 STEVVLATAGYDHTIRFWEALSGICLRTVQHPDSQVNRLAISPDKRYLAAAGNPHVRLYEVQTN-NPNPVASFDGHTGNVTAIAYQSAGRWIVTGSEDGTIKIWDVRAPGVQRDYE---------------------------LKVPVNDVIIHPNQGELVSCDQSGSIKVWDLSENLCTHELLPEEDVPARSVSMAADGSMLICSNNKGNFYVWKMKE---KGDLTELEAVQKVNAHSKYITKCVLSPDTKSLATCSADNTVKIW 241          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: ORX56688.1 (WD40 repeat-like protein [Piromyces finnis])

HSP 1 Score: 274.2 bits (700), Expect = 5.200e-70
Identity = 127/266 (47.74%), Postives = 173/266 (65.04%), Query Frame = 0
Query:    2 SSAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLW 268
            S+ VVLATAGYDH IRFWEA +G+C R++++PDSQVN L I+PDK++L A GNPHVRL+EV  N NPNPV++++GH GNV A+ +Q  G+W+ T SEDGT+K+WD+RAPG QR ++                             V VN V++HPNQ E+V+ DQ G ++VWDL  N C HE  PE +VP RSVS++ D S++   NN+ + YVW+ +E   +G        Q V  H++Y+ KC  SPD++ L T SAD T K+W
Sbjct:    7 STEVVLATAGYDHTIRFWEALSGICLRTVQHPDSQVNRLAISPDKRYLAAAGNPHVRLYEVQTN-NPNPVVNFDGHTGNVTAIAYQSAGRWIVTGSEDGTIKIWDVRAPGVQRDYE---------------------------LKVPVNDVIIHPNQGELVSCDQSGSIKVWDLSENLCTHELLPEEDVPARSVSMAADGSMLICSNNKGNFYVWKMKE---KGDLTELEAVQKVNAHSKYITKCVLSPDTRSLATCSADNTVKIW 241          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: CCI45647.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 271.9 bits (694), Expect = 2.600e-69
Identity = 127/267 (47.57%), Postives = 179/267 (67.04%), Query Frame = 0
Query:    3 SAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWNV 270
            + VVLATAGYDH IRFWEA +G C+R+++Y DSQVNCL ITPDK ++ A GNPH+RLFE+  N NPN V +Y+GH GNV ++GFQQ+GKW+YT+SEDGT+K+WD+RA G QRS++    A     +  +S ++S+G     + L+ +NS  LHPNQAEV   DQ G +RV+DL ++ CV    P+G+  ++S+ +  D SL+ A NN    + ++P  G     F        ++ H  Y+LKC  S + + L T S+DKTAK+WN+
Sbjct:    2 TGVVLATAGYDHTIRFWEAASGTCNRTVKYSDSQVNCLNITPDKNYITAAGNPHIRLFEINSN-NPNAVSTYDGHNGNVTSLGFQQQGKWMYTSSEDGTLKIWDLRATGFQRSYECSTFAPG-KKAGHSSNANSSGNSSTTSGLIPLNSAALHPNQAEVFVADQNGAIRVFDLTADSCVDVLIPDGDCGIKSLDIVKDGSLLVAANNRGKCFFYQPNSGGRYELF------HTLQAHNGYILKCQTSSNGRLLATCSSDKTAKIWNI 260          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: XP_009042143.1 (hypothetical protein AURANDRAFT_34399 [Aureococcus anophagefferens] >EGB03167.1 hypothetical protein AURANDRAFT_34399 [Aureococcus anophagefferens])

HSP 1 Score: 270.0 bits (689), Expect = 9.900e-69
Identity = 174/339 (51.33%), Postives = 228/339 (67.26%), Query Frame = 0
Query:    3 SAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRA-PGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQP-EGNV-PVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWNVAK-WEMEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSNLAVTCVALNDAQT 338
            +AVVLATAGYDHKIRFWEA + VC+R +RYPDSQVNCL I+ DK ++ AGG+PHVR+F+V   +N +P+  +  H GNV AVGFQ +  W+++ SEDGTVK+WD+RA P CQR+++ + A                  G P     A  SV LHP Q+E+VTGD  G VRVWDL +++C  E +P +G + P+RSV++++D S + AG N+A+LY WRP   +   +F     A    +    +LKC+ SPD+Q LVTTS+DKTAK+W++A+ W +E           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G +LAVTC ALND+ T
Sbjct:    2 AAVVLATAGYDHKIRFWEASSRVCTRIVRYPDSQVNCLAISQDKLYMAAGGHPHVRIFDVANPSNSSPIAEF-SHCGNVTAVGFQHDRSWMFSGSEDGTVKIWDLRAPPRCQRTYEMLGA-----------------DGRPS----ACTSVTLHPRQSELVTGDHAGLVRVWDLAADKCSAELRPTDGELSPIRSVAIASDGSSLVAGTNDANLYAWRP---SGSKHFELEHAAHEDGSGHTCILKCSISPDAQLLVTTSSDKTAKVWSIARGWTLEKTLAQHQRWVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRYYSGHSLAVTCCALNDSST 315          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: GAX97747.1 (WD repeat protein pop3 [Pythium insidiosum])

HSP 1 Score: 269.6 bits (688), Expect = 1.300e-68
Identity = 131/267 (49.06%), Postives = 177/267 (66.29%), Query Frame = 0
Query:    3 SAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWNV 270
            +AVVLATAGYDH IRFW+A +G C+R+++Y DSQVNCLQITPDK+ + A GNPH+RLFE+  N NPN V SY+GH+GNVM++GFQ+ GKW+Y+ SEDGT+K+WD+RAP CQR++D                    G        V +NSVVLHPNQAE++ GDQ G VR++DL +N       P+G V +RSV +  D S+I A NN  +++ + P + T E      +H   +K H  Y+LK   S + + L T S+DKTAK+WN+
Sbjct:    2 AAVVLATAGYDHTIRFWDAASGTCNRTVKYADSQVNCLQITPDKKHIAAAGNPHIRLFEINSN-NPNHVFSYDGHSGNVMSLGFQRHGKWMYSCSEDGTLKIWDLRAPNCQRNYD-------------------CG--------VPLNSVVLHPNQAELIVGDQNGGVRIYDLTANAMSARLVPDGEVGIRSVDIVRDGSMIVAANNHGNVFFYLPGKETYE------LH-HTLKAHDAYILKIKTSANGKYLATCSSDKTAKVWNI 233          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: XP_016611122.1 (hypothetical protein SPPG_02148 [Spizellomyces punctatus DAOM BR117] >KND03083.1 hypothetical protein SPPG_02148 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 269.2 bits (687), Expect = 1.700e-68
Identity = 124/264 (46.97%), Postives = 171/264 (64.77%), Query Frame = 0
Query:    5 VVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWN 269
            VVLATAGYDH IRFWEA +G+C R+I++PDSQVN L I+PDK++L A GNPHVR++EV   +NPNP+ S++GH GNV ++GFQ  G+W+ T SEDGT+K+WD+RAPG QR ++  +                            VN V++HPNQ E+++ DQ G V+VWDLG N C HE  PE + P RSV+++ D S++ A NN+ + YVW+ +     G   +      V  H++Y+ KC  SPD++ L T SAD T K+WN
Sbjct:   52 VVLATAGYDHTIRFWEALSGICLRTIQHPDSQVNRLAISPDKRYLAAAGNPHVRMYEV-QTSNPNPITSFDGHTGNVTSIGFQSAGRWIVTGSEDGTIKIWDVRAPGIQRDYELKS---------------------------PVNDVIIHPNQGELISCDQNGSVKVWDLGENACTHELLPEEDTPARSVTMAADGSILVAANNKGNYYVWKTK---TTGDLTQLEALTKVAAHSKYISKCMLSPDTKLLATCSADHTVKIWN 284          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: OIV95251.1 (hypothetical protein TanjilG_21641 [Lupinus angustifolius])

HSP 1 Score: 269.2 bits (687), Expect = 1.700e-68
Identity = 137/286 (47.90%), Postives = 177/286 (61.89%), Query Frame = 0
Query:    4 AVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPN----------QAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPD----SQRLVTTSADKTAKLWNVAKWEME 276
            +V+LATA YDH IRFWEA +G C R+I+YPDSQVN L+ITPDK++L A GNPH+RLF+V  N  P PVMSY+ H  NVMAVGFQ +G W+Y+ SEDGTVK+WD+RAPGCQR +++ A                           AVN+VVLHPN          Q E+++GDQ G +RVWDL +N C  E  PE +  VRS++V  D SL+ A NN    YVWR  +GT       P+H   ++ H  Y+LKC  SP+     + L T S+D T K+WNV  + +E
Sbjct:    5 SVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRLFDVNAN-TPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA---------------------------AVNTVVLHPNQFSLILFVIQQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNNGTCYVWRLLQGTQTMTNFEPLH--KLQAHKGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLE 260          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: EXX60115.1 (Lst8p [Rhizophagus irregularis DAOM 197198w] >GBC46502.1 WD repeat protein Pop3 [Rhizophagus irregularis DAOM 181602] >PKC01386.1 WD repeat-containing protein wat1 [Rhizophagus irregularis] >PKC57064.1 WD repeat-containing protein wat1 [Rhizophagus irregularis] >PKK63727.1 WD repeat-containing protein wat1 [Rhizophagus irregularis] >PKY26728.1 WD repeat-containing protein wat1 [Rhizophagus irregularis] >PKY45685.1 WD repeat-containing protein wat1 [Rhizophagus irregularis] >POG61459.1 WD repeat-containing protein wat1 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 268.1 bits (684), Expect = 3.800e-68
Identity = 128/278 (46.04%), Postives = 176/278 (63.31%), Query Frame = 0
Query:    2 SSAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARP-VHAQPVKT---HARYLLKCAFSPDSQRLVTTSADKTAKLWNVAKWEME 276
            S +V+L TAGYDH IRFWEA +G+CSR+I++PDSQVN L I+PDK++L A GN H+RL+++  + NPNP+ S++GH GNV AVGF  EGKW+ T SEDGT+K+WD RAP  QR++D+                            V VN V +HPNQ E+++ DQ+G +++WDLG N C HE  PE +VP+RSV+V+ D S++ A NN+ + YVW+          AR     QP+ T   H RY+ +C  SPD + L T SAD T K+W+    E +
Sbjct:   33 SHSVILVTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCISPDKRYLAAAGNQHIRLYDI-NSPNPNPITSFDGHTGNVTAVGFHCEGKWMVTGSEDGTLKIWDTRAPSIQRNYDH---------------------------KVPVNDVAIHPNQGELISCDQKGSIKIWDLGENSCTHELVPEEDVPLRSVTVAIDGSMLVAANNKGNCYVWKMSN-------ARDFTDLQPITTFSAHKRYITRCLLSPDVKHLATCSADTTVKIWSATNHEFK 275          
BLAST of NO05G01100 vs. NCBI_GenBank
Match: CCA21011.1 (WD repeat protein pop3 putative [Albugo laibachii Nc14])

HSP 1 Score: 266.5 bits (680), Expect = 1.100e-67
Identity = 125/269 (46.47%), Postives = 180/269 (66.91%), Query Frame = 0
Query:    3 SAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLVAGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDGTVKVWDIRAPGCQRSFDNVAAATAIP--NSSKNSGSSSAGGGHPHAPLVAVNSVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSNDASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSPDSQRLVTTSADKTAKLWNV 270
            + VVLATAGYDH IRFWEA +G C+R+++Y DSQVNCL ITPDK ++ A GNPH+RLFE+  N NPN V +Y+GH GNV ++GFQQ+GKW+YT+SEDGT+K+WD+RA G QRS++    ++ +P   +  +S +++ G     + L  +NS  LHPNQAEV   DQ G +RV+DL ++ CV    P+G+  ++S+ +  D S++ A NN    + ++P  G     F        ++ H  Y+LKC  S + + L T S+DKTAK+WN+
Sbjct:    2 AGVVLATAGYDHTIRFWEAASGTCNRTVKYSDSQVNCLNITPDKNYITAAGNPHIRLFEINSN-NPNAVSTYDGHNGNVTSLGFQQQGKWMYTSSEDGTLKIWDLRATGYQRSYE---CSSFVPGKKAGHSSNANATGNSTTTSGLTPLNSAALHPNQAEVFVADQSGAIRVFDLTADSCVDLLVPDGDCGIKSLDIVKDGSILVAANNCGKCFFYQPNSGGRYELF------YTLQAHDGYILKCQTSSNGRLLATCSSDKTAKIWNI 260          
The following BLAST results are available for this feature:
BLAST of NO05G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28213.13.800e-12982.44WD40 repeat containing protein [Nannochloropsis ga... [more]
ORX80649.14.000e-7048.12WD40 repeat-like protein [Anaeromyces robustus][more]
ORX56688.15.200e-7047.74WD40 repeat-like protein [Piromyces finnis][more]
CCI45647.12.600e-6947.57unnamed protein product [Albugo candida][more]
XP_009042143.19.900e-6951.33hypothetical protein AURANDRAFT_34399 [Aureococcus... [more]
GAX97747.11.300e-6849.06WD repeat protein pop3 [Pythium insidiosum][more]
XP_016611122.11.700e-6846.97hypothetical protein SPPG_02148 [Spizellomyces pun... [more]
OIV95251.11.700e-6847.90hypothetical protein TanjilG_21641 [Lupinus angust... [more]
EXX60115.13.800e-6846.04Lst8p [Rhizophagus irregularis DAOM 197198w] >GBC4... [more]
CCA21011.11.100e-6746.47WD repeat protein pop3 putative [Albugo laibachii ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003758NSK003758Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01100.1NO05G01100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583748gene_2901Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g35gene2296Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01100.1NO05G01100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01100 ID=NO05G01100|Name=NO05G01100|organism=Nannochloropsis oceanica|type=gene|length=1014bp
ATGTCATCCGCCGTTGTCCTGGCTACGGCAGGCTACGACCACAAGATTCG
GTTTTGGGAGGCTCCAACAGGGGTCTGTTCCCGCTCCATCCGCTACCCCG
ACTCGCAAGTTAATTGTCTCCAAATCACCCCTGACAAGCAGTTCCTGGTG
GCTGGAGGCAACCCCCACGTCCGCCTTTTCGAAGTAGGCGGCAATGCCAA
CCCGAATCCAGTGATGAGCTATGAAGGCCACGCGGGGAATGTTATGGCTG
TGGGCTTCCAGCAAGAAGGCAAGTGGCTGTACACGGCATCGGAGGACGGG
ACGGTCAAGGTGTGGGACATTCGGGCGCCTGGGTGCCAGCGGAGCTTTGA
CAATGTGGCCGCCGCCACGGCCATCCCCAATAGCAGCAAAAATAGTGGAA
GTTCATCTGCAGGAGGAGGACATCCGCACGCACCGCTGGTGGCAGTGAAC
TCAGTTGTGCTTCATCCCAATCAAGCGGAAGTGGTGACGGGGGATCAAGA
AGGGCGTGTCCGCGTCTGGGACTTGGGCAGCAACCGTTGTGTGCACGAGA
CACAACCTGAAGGGAATGTGCCCGTCCGTTCCGTTTCGGTGTCGAATGAT
GCTTCGCTGATAGCAGCGGGGAACAACGAAGCGCACTTGTATGTGTGGCG
GCCGCAGGAAGGCACTGCAGAGGGGTATTTTGCCCGGCCCGTTCACGCGC
AGCCCGTGAAAACTCATGCCAGATACTTGCTGAAATGTGCGTTTTCTCCC
GATTCTCAGCGCTTGGTCACGACGTCGGCGGACAAGACGGCCAAGCTTTG
GAATGTGGCAAAGTGGGAGATGGAGCACACATTGAAAGACCATCAACGCT
GGGTGTGGGATGCCGCCTTCTCGGCGGACTCATCCTATTTGGTCACGGCT
TGCTCGGACCACCACCCGCGACTATGGGACTTGCGAACAGGCGACCTGGT
TAGAACATACCAAGGCTCGAATCTGGCGGTGACGTGCGTTGCGCTCAACG
ATGCGCAGACGTAG
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protein sequence of NO05G01100.1

>NO05G01100.1-protein ID=NO05G01100.1-protein|Name=NO05G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MSSAVVLATAGYDHKIRFWEAPTGVCSRSIRYPDSQVNCLQITPDKQFLV
AGGNPHVRLFEVGGNANPNPVMSYEGHAGNVMAVGFQQEGKWLYTASEDG
TVKVWDIRAPGCQRSFDNVAAATAIPNSSKNSGSSSAGGGHPHAPLVAVN
SVVLHPNQAEVVTGDQEGRVRVWDLGSNRCVHETQPEGNVPVRSVSVSND
ASLIAAGNNEAHLYVWRPQEGTAEGYFARPVHAQPVKTHARYLLKCAFSP
DSQRLVTTSADKTAKLWNVAKWEMEHTLKDHQRWVWDAAFSADSSYLVTA
CSDHHPRLWDLRTGDLVRTYQGSNLAVTCVALNDAQT*
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