NO05G01040, NO05G01040 (gene) Nannochloropsis oceanica

Overview
NameNO05G01040
Unique NameNO05G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2359
Alignment locationchr5:310824..313182 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:310824..313182 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G01040.1NO05G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G01040.1NO05G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G01040 ID=NO05G01040|Name=NO05G01040|organism=Nannochloropsis oceanica|type=gene|length=2359bp
ATGGGGACGGAGAATTACCCGTGCCATACGTCGGATCATAGAGGGAACGG
GCCGgtaagtgcgatatgggagggagggaaaggtgggagggatgggtagc
acacatgattacaccgtcctcttgaacgtagttagcgttacttctgtcca
ctagcttgcatgtctgtatgtacaggcgcaaggatgtgtggcattttttt
gaaagagagtacaataagagcgccgcacggtcgtctcgatccatgatgga
gaggacgaggcctactatcatcataagatacaacgaccatgccctatccc
tgattgcaggctcactttatcgaacgcgcgtaggttgttgttattgttgt
cacaaggtggcatttcgagagagggcatatttttatcaccttgactcccc
tcccctccactttcttgaataaaacagCAAGCAGACTACTTGATGGGCGC
GTCGCACTCATCCACATCCTCGTCGTTTCAACCCTTCACATCCGCTTTTT
CTACGTCTTCTTCGTCGTCCTCGTCTGCCGATTTGCCCGGATCACCACAA
ACTACGGCCGAATCGCAACTTCCTCCCCCTCCTCCTCCCCCTTCCCTGAA
GCCACCTCGAAGCAGCACTCCCGCTCATCTTGCCATCGGGCACGGCGGAG
GCAACATGACAATAGACGCCATCCTCCACCAGCAGGCTGAAGGGCGCAAG
GCCTCCAGAATTAATACGACAGGACGAGGAGGTGCAATCGCCGGAATAGC
AGAAGCAGCAGCAGCACGTTTTGTCCCGGATAGGCTTTCTTCTTGTACCA
GTGAGAATCAGGACCGGCAGCAGCAGCACCACCAGCACCAGCAGCAGCAG
CAGCAGCAGAAGGTGGAACGGCACAAGCAAGATGGGTTAAGCTTACGAGA
GGAAGACGAGGAGGAGGTCGCGGACGAGGAGAAGGAGCAGGGTGGGAGGG
AGGGCTTGGAGACGGAAGGGGGTGGGGAGCATGGTCACTACGTCCACCCA
CCGGGCTTAGTCGACGAGTCTTTCTACCCTAGCGCACAGAAGCAACAAGA
GCTCCAGCAGGAGATGTACCTGCGGCTACAGCAGCAGCAAGAGGAGGCAA
ATGCACTAGAACGGGCACGCCGGAGCACCAGCAGCGGCACCACCACAACC
ATCAGCAACAATCTTTCTTCTTCTTATTTGCAAAAACGCGCGGCGGATAT
GATGGATTGGCGTTACGGCGTGGACCGCCCAGGTCGTAAGTCTTCCTCAT
CAATTTCTCCTGTCTCCGCCTCCTGCCCTTCTTCCTCCACGAATGGTACC
GGTGATAATGCCCTCCACCTATCATTCGTCAGCCCTCCAGCAGCAGCAGC
AGCAGCAGCAGTAGCAGCAGGTCATCATTCCGACACCTGTAGATCATGGC
AGGGGGAGGGCGAAGTGGGGGAAAGAGGTGAAAGAGGGGTTTCTGCACCG
ATGGATGAGGGAGGGGTTTCTGCACCGATGGATGAGAGCAGTGGTGAGGA
GGAGAATGTCCTTGTGTCGCCGGCCTACTTCCAGCAGCAGTACGGTCATT
ACAGACCCCAGCAGCAGCAGCAGCAGCAACGGCAGCAGCAACAGCATGAG
CAAGAAGTAGCGTTACTACAGCAACGACTACAACAACAGCAGACGAAGCA
GCGTCAAAGTGTAGTGGATGCAGCTGCAAGTACTTTGTACCCACTACACC
AGCAGCAGCAGTTGAGACCAGGAGGCAGTAGCACCGCCACCACCACCACC
ACCACCAGCAGCAGCAACAACAACAACAACAACAGGAATGTTTATGGAGG
TGGGAGTCCGACGGAGCACACACCAATAGCAGCAGCTGCAGCTGGCACCT
CGTACGACAGCTACACCTACATGCTGCAGCAGCAGCACCAGCAGCACCAG
CAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAGCAGCACCA
GCACCAGAACCCGCACCAGCACTTTCATCCACGAAGCAATGGTGCTTTAA
CCTCCTCGTCGTCCTCATACTCGTCGTACGGCATTCCCAGTATTGGCAAG
ACTATTATGCAGTTGTTTAAGGGAGGTATCAGCAGAGCAGTCACCTCGTC
TTCCTCTTCCGGCCCCTCTTCCTCTATTTCCACAACTACCACTCCCACCA
ACAGCAGCCAATCCTCCTCTTCCTCCCTCTCCTCCTTCTACTCCTCCACA
ACCTTTCCCTTGTCCTCCTCCACCTCCCCTTCCCCCGCCCTTCCCCCCCC
CCGGCAGCCGCCGCCTCTCCCGTCTCAATCGCTCCTTCCGTCTCCACTTC
CCCCGCTGGCCCTGCCCTCCCCTTGCTGGGGTCAACAACAGCAGAAATCG
ATCGTTTGA
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protein sequence of NO05G01040.1

>NO05G01040.1-protein ID=NO05G01040.1-protein|Name=NO05G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MGTENYPCHTSDHRGNGPQADYLMGASHSSTSSSFQPFTSAFSTSSSSSS
SADLPGSPQTTAESQLPPPPPPPSLKPPRSSTPAHLAIGHGGGNMTIDAI
LHQQAEGRKASRINTTGRGGAIAGIAEAAAARFVPDRLSSCTSENQDRQQ
QHHQHQQQQQQQKVERHKQDGLSLREEDEEEVADEEKEQGGREGLETEGG
GEHGHYVHPPGLVDESFYPSAQKQQELQQEMYLRLQQQQEEANALERARR
STSSGTTTTISNNLSSSYLQKRAADMMDWRYGVDRPGRKSSSSISPVSAS
CPSSSTNGTGDNALHLSFVSPPAAAAAAAVAAGHHSDTCRSWQGEGEVGE
RGERGVSAPMDEGGVSAPMDESSGEEENVLVSPAYFQQQYGHYRPQQQQQ
QQRQQQQHEQEVALLQQRLQQQQTKQRQSVVDAAASTLYPLHQQQQLRPG
GSSTATTTTTTSSSNNNNNNRNVYGGGSPTEHTPIAAAAAGTSYDSYTYM
LQQQHQQHQQHQHQHQHQHQHQQQHQHQNPHQHFHPRSNGALTSSSSSYS
SYGIPSIGKTIMQLFKGGISRAVTSSSSSGPSSSISTTTTPTNSSQSSSS
SLSSFYSSTTFPLSSSTSPSPALPPPRQPPPLPSQSLLPSPLPPLALPSP
CWGQQQQKSIV*
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Synonyms
Publications