NO05G01010, NO05G01010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01010 vs. NCBI_GenBank
Match: EWM28145.1 (cop9 signalosome complex subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 232.3 bits (591), Expect = 3.600e-57 Identity = 200/453 (44.15%), Postives = 257/453 (56.73%), Query Frame = 0 Query: 37 MAVLDDVLSCILTLSTGAQENLDKLNAKLFDQEDALRSLSTLDGPTPQDLPPLLAAAQ-TLSLPHHTLGIIHLLASQATALTSQPEKNQLRLHFLSAFEKLCLSLDREQATRASKKFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSPPSPREVMRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLARQV 489 MAVLDDVL+ IL LSTG +E+ D+L+ KL +Q + LRSLST ++ PPLL ++ TL LP HTLG++HLLA+QA + S + R HFL E + D +QA RA K+FA XXXXXXXXXXXXXX P+ R+++RGL PL+TAA + DPHCLTP+HP LQ+CL + R QQA DFV +RPIYRVDP TG+V LD+LRYF+YAGM F+ L+ +A DCF+ V++TPA ALSAVA+E+Y+KL+L ALL XXXXXXXXXXXXXXXXXXXXXXXXXXXX LL KT +V+R++ Q ++ Y D+L AA+A +A V+ L+ +H + L A N+GLA+QV Sbjct: 1 MAVLDDVLNHILNLSTGKEEDYDELHRKLSNQAENLRSLSTTTATGHEEPPPLLRVSRDTLHLPEHTLGVLHLLAAQAPTV-SVHHASSHREHFLGVCEVFLVKFDPDQAARAVKEFAELVHRYTDLLGHPPPSDAXXXXXXXXXXXXXXSMGHNNLGEEAEVAAETAHQPAQEDAAPAPTRPL----------------------------------------PAVRDLVRGLLPLDTAARTLVTDPHCLTPVHPDLLQVCLGAGRLQQAVDFVRERPIYRVDPAATGVVALDVLRYFYYAGMAFLSLQHLHDAVDCFKAVISTPAQALSAVAVEAYRKLVLAHALL-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPPKTSPIVARSIRQHALPYHDILTAAQAEDAERVRGLLSQHADTLTAHQNMGLAQQV 401
BLAST of NO05G01010 vs. NCBI_GenBank
Match: CBJ27166.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.1 bits (266), Expect = 1.800e-19 Identity = 52/124 (41.94%), Postives = 82/124 (66.13%), Query Frame = 0 Query: 269 LTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVP 393 L PL +AA D LTP+HP FLQ C+A++ Y + F+D RPI+ V+PV TG+ + LR+F+Y G+V++G ++++ A D F +L PA+ LS++ +E YKK++LV +L+ S P+P Sbjct: 139 LLPLRSAAIKMDGDRSSLTPLHPEFLQCCIAAKCYSLGSRFMDDRPIFGVEPVATGLTPVHFLRHFYYGGIVYIGAKQWKGALDSFLMLLTIPANVLSSLVIEGYKKMMLV-SLIISGEVPPLP 261
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_002965797.1 (COP9 signalosome complex subunit 3 [Selaginella moellendorffii] >XP_024522672.1 COP9 signalosome complex subunit 3-like [Selaginella moellendorffii] >EFJ33217.1 hypothetical protein SELMODRAFT_439255 [Selaginella moellendorffii]) HSP 1 Score: 103.2 bits (256), Expect = 2.500e-18 Identity = 69/223 (30.94%), Postives = 103/223 (46.19%), Query Frame = 0 Query: 266 MRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLARQV 489 +R + PL+ A F P LTPIH FL +CL S+ Y+ AA ++ + I+ +DP KTG+V D L Y +Y GMV +GL+ F A + + PAH ++A+A+E+YKK +LV L+ + P P TPS+V R + Y +++ N ++ + H EA D NLGLA+QV Sbjct: 116 IRAVLPLQVAIRKFQPSSEYLTPIHADFLLVCLLSKCYKAAAPILEDQ-IFEIDPKKTGLVPKDYLLYCYYGGMVQIGLKNFLRAMELLQHAFTAPAHVMNAIAVEAYKKYVLV-CLIHNGQVPPFP----------------------------------------KYTPSIVQRNLKGCCQGYIELVTVYNNRNITDLQRCLTSHEEAFRNDKNLGLAKQV 296
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_012752706.1 (hypothetical protein SAMD00019534_075550 [Acytostelium subglobosum LB1] >GAM24380.1 hypothetical protein SAMD00019534_075550 [Acytostelium subglobosum LB1]) HSP 1 Score: 100.1 bits (248), Expect = 2.200e-17 Identity = 71/224 (31.70%), Postives = 100/224 (44.64%), Query Frame = 0 Query: 263 REVMRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLAR 487 R+ RG+ PL A LTP+H FLQLC+ S+ Y A V Q I V+P +T + + D+L YF+YAG+VF L+ + +A D FR V PA A+SA+A+E+YKK LV ++ +GT N TP VV RA+ YS+ + GN + A + E DNN+GL + Sbjct: 107 RQPSRGVLPLRRALGMLITSSTQLTPVHADFLQLCILSKCYHMALPVVSQ-SITDVNPDQTSITIRDVLCYFYYAGIVFSTLKMYRQALDAFRQVWTAPATAISAIAIEAYKKYYLVFLMM------------NGTTPG-----------------------------FPNYTPIVVQRAIKNHCKAYSEFGTSIINGNINEIHAKASSNAETFSKDNNMGLVK 288
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_020436536.1 (proteasome component region PCI domain-containing protein [Heterostelium album PN500] >EFA84422.1 proteasome component region PCI domain-containing protein [Heterostelium album PN500]) HSP 1 Score: 97.1 bits (240), Expect = 1.800e-16 Identity = 67/224 (29.91%), Postives = 98/224 (43.75%), Query Frame = 0 Query: 263 REVMRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLAR 487 R+ RG+ PL+ A + P LTPIH FL LC+ S+ Y A + I V+P +T + + D+L YF+YAG+VF +++ ++A + F+ V PAHALSA+A+ESYKK LV + GT TP VV R + Y D +GN + ++ E DNN+GL + Sbjct: 104 RQPARGVLPLKHAICALTDRPSQLTPIHSDFLILCILSKSYHVAMPVI-TNSITDVNPEQTSIAIKDVLAYFYYAGIVFATMKKHKQALESFKQVWTAPAHALSAIAIESYKKYYLVF------------LSVHGTTPG-----------------------------FPKYTPFVVQRTIKNHCKTYIDFGTCYLSGNMAEINTKFHQNAETFQKDNNIGLVK 285
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_024389705.1 (COP9 signalosome complex subunit 3-like [Physcomitrella patens] >PNR45510.1 hypothetical protein PHYPA_015281 [Physcomitrella patens]) HSP 1 Score: 95.5 bits (236), Expect = 5.300e-16 Identity = 65/225 (28.89%), Postives = 102/225 (45.33%), Query Frame = 0 Query: 264 EVMRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLARQV 489 E MR + PL+ A P LT IH +LQ+CL S+ Y+ + ++ I+ +D KT +V D L Y +Y GM+++GL++F +A + F+ + P AL+A+ + ++ K +LV +L+ + P P TP+VV R + Y D+ + N VK I +H E DNNLGLA+QV Sbjct: 117 EPMRAILPLQCAIRKLQPSSEYLTAIHADYLQMCLLSKCYKASLSILED-DIFEIDQKKTSLVPRDFLLYCYYGGMIYIGLKKFSKALEFFQHAITAPTTALNAITIAAFGKYVLV-SLIQNGQVPPFP----------------------------------------KYTPAVVLRNLKSCVQDYLDLANLYASRNIAEVKRCITQHEEVFKNDNNLGLAKQV 299
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_004350314.1 (proteasome component region PCI domain-containing protein [Cavenderia fasciculata] >EGG13610.1 proteasome component region PCI domain-containing protein [Cavenderia fasciculata]) HSP 1 Score: 92.8 bits (229), Expect = 3.400e-15 Identity = 64/220 (29.09%), Postives = 96/220 (43.64%), Query Frame = 0 Query: 267 RGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLAR 487 RG+ PL+ A F + LTP H FLQLC+ S+ Y QA + + ++P +T + V D+L YF+YAG++F L+++++A + FR PA ALSA+A+E+YKK LV ++ +GT TP+VV R + Y + GN + H E D NLGL + Sbjct: 112 RGVLPLKRAVCVFPEKTNTLTPQHADFLQLCILSKCYHQALPIISESTT-NLNPEQTNINVKDVLSYFYYAGIIFTALKKYKQALEAFRQAWTAPATALSAIAIEAYKKYYLVYLMV------------NGTIPG-----------------------------FPKYTPTVVQRTIKNHCKSYVEYGQTFTGGNVQEIHNKASAHAENFQKDKNLGLVK 289
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_020261492.1 (COP9 signalosome complex subunit 3 [Asparagus officinalis]) HSP 1 Score: 91.3 bits (225), Expect = 1.000e-14 Identity = 62/222 (27.93%), Postives = 100/222 (45.05%), Query Frame = 0 Query: 266 MRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLARQ 488 MRG+ PL TA P LT +H FL LC+ S+RY+ A +D+R ++ D + DL Y +Y GM+ +GL+R+++A +C V+ P L+A+A+E+YKK +LV +L+ + P P S R + + Y D+ ++ +G ++ IE + E +DNNLGL +Q Sbjct: 119 MRGVAPLRTAIRKLRPSSEHLTALHADFLLLCILSKRYKAAQSILDER-VFEFD------LPRDLFLYCYYGGMINIGLKRYDKALECLHNVITAPMSTLNAIAVEAYKKYILV-SLIHNGQVPPFP----------------------------------------KYISSAAQRNLKNYTQPYVDLASSYASGKVSELETSIEANLEKFQSDNNLGLVKQ 292
BLAST of NO05G01010 vs. NCBI_GenBank
Match: KYR02941.1 (proteasome component region PCI domain-containing protein [Tieghemostelium lacteum]) HSP 1 Score: 90.5 bits (223), Expect = 1.700e-14 Identity = 42/114 (36.84%), Postives = 71/114 (62.28%), Query Frame = 0 Query: 266 MRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLV 380 ++G+ PL+ S P LTP+H FLQLC+ S+ Y A +D + + +T + + D+L YF+YAG+++ L+ +++A D F+ V PA ALS++A+E+YKK +L+ Sbjct: 110 IKGIAPLKRVINSLTDKPTQLTPVHSDFLQLCILSKNYSLALPVIDAE-VNEFNVEQTQINIKDILTYFYYAGIIYATLKNYKKALDAFKFVFTAPATALSSIAIEAYKKYVLI 222
BLAST of NO05G01010 vs. NCBI_GenBank
Match: XP_022005613.1 (COP9 signalosome complex subunit 3 [Helianthus annuus] >OTF98916.1 putative proteasome component (PCI) domain protein [Helianthus annuus]) HSP 1 Score: 89.4 bits (220), Expect = 3.800e-14 Identity = 62/223 (27.80%), Postives = 99/223 (44.39%), Query Frame = 0 Query: 266 MRGLTPLETAATSFAPDPHCLTPIHPAFLQLCLASRRYQQAADFVDQRPIYRVDPVKTGMVVLDLLRYFHYAGMVFVGLRRFEEACDCFRTVLATPAHALSAVALESYKKLLLVTALLPSSSSLPVPFAESGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALLSNKTPSVVSRAVGQMSVMYSDVLAAARAGNAGGVKALIEKHTEALMADNNLGLARQV 489 MR + PL TA P P LTP+HP FLQ+CL+++ Y+ ++ IY+VD + D Y +Y GM+ +G +RF +A + F V+ P +++A+A+E+YKK +LV+ + S P T SV R + S Y ++ + GN ++A ++ + E NNLGL +QV Sbjct: 123 MRAVGPLLTAIRKIQPSPEHLTPLHPDFLQVCLSAKCYKIGYSILED-DIYKVDQPR------DFFLYCYYGGMICIGQKRFAKALELFHNVVTAPMSSMNAIAVEAYKKYILVSLIHLRQFSSTFP----------------------------------------KYTSSVAQRNLKNFSQPYIELANSYSTGNISELQAFVQANQEKFENGNNLGLVKQV 298 The following BLAST results are available for this feature:
BLAST of NO05G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01010 ID=NO05G01010|Name=NO05G01010|organism=Nannochloropsis oceanica|type=gene|length=4537bpback to top protein sequence of NO05G01010.1 >NO05G01010.1-protein ID=NO05G01010.1-protein|Name=NO05G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=690bpback to top protein sequence of NO05G01010.2 >NO05G01010.2-protein ID=NO05G01010.2-protein|Name=NO05G01010.2|organism=Nannochloropsis oceanica|type=polypeptide|length=538bpback to top Synonyms
Publications
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