NO05G00990, NO05G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO05G00990 vs. NCBI_GenBank
Match: XP_005853633.1 (hypothetical protein NGA_2085600, partial [Nannochloropsis gaditana CCMP526] >EKU22727.1 hypothetical protein NGA_2085600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.7 bits (618), Expect = 9.000e-61 Identity = 130/175 (74.29%), Postives = 149/175 (85.14%), Query Frame = 0 Query: 1 MMGILLLLALVATSATTTLGFIMPAAHPIASPVRTLVTAVAAAPSAVVVETFILPMGDDSRLKIRCESETFKDLALRVNALLASFRNIKAANAAEDKKGPAPREPSLEFLTKNFETHLEMECNPNIYPDAFHATVFVKVKNEVLEVTSQCQLSALVDALKLYKQTYKIKMEASNA 176 M +L LLA +AT+A +T+ F++PA H + S V+T AV A AVVVETFILPMGDDSRLKIRC+ ETFKDLALRVNALLASFR IKAANAAEDK GPAPREPSLEFL +FET LEMECNPNIYPDAFHA VFVKV+N+VLEVTSQCQLSALVDALKLYK TYK++++A+ + Sbjct: 10 MRSVLFLLA-IATAARSTVSFVLPAKHQV-SHVQTSAAAVVGASPAVVVETFILPMGDDSRLKIRCKPETFKDLALRVNALLASFRAIKAANAAEDKTGPAPREPSLEFLVTDFETRLEMECNPNIYPDAFHAAVFVKVQNDVLEVTSQCQLSALVDALKLYKSTYKVELDANKS 182
BLAST of NO05G00990 vs. NCBI_GenBank
Match: OSX76720.1 (hypothetical protein BU14_0177s0002 [Porphyra umbilicalis]) HSP 1 Score: 70.9 bits (172), Expect = 4.700e-9 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0 Query: 41 AAAPSAVVVETFILPMGDDSRLKIRCESETFKDLALRVNALLASFRNIKAANAAEDKKGPAPREPSLEFLTKNFETHLEMECNPNIYPDAFHATVFVKVKNEVLEVTSQCQLSALVDALKLYKQTYK 168 +AAP L GDD+ + + + +NALLASF+ + A AA G +P++EF+ + + +ECNPN++ AF ATV+VKV + + V +Q L+ LVD +K +K K Sbjct: 60 SAAPRTSAPPVLTLNTGDDTTITVALPVGAVAPMGAALNALLASFKAVATAAAA----GKRDVQPAMEFVHEEEGLRVALECNPNLHASAFKATVYVKVASGGVVVATQALLTRLVDNVKEFKAAVK 182
BLAST of NO05G00990 vs. NCBI_GenBank
Match: CBJ29163.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-8 Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = 0 Query: 1 MMGI-LLLLALVATSATTTLGFIMP----------AAHPIASPVRTLVTAVAAAPS-AVVVETFILPMGDDSRLKIRCESETFKDLALRVNALLASFRNIKAANAAEDKKGPAPREPSLEFLTKNFETHLEMECNPNIYPDAFHATVFVKVKNEVLEVTSQCQLSALVDALKLYKQTYK 168 M GI L AL A T GF+ P A ++P + A A A + F + + DD+R+ + + + LA VN +L SF+ +K ANAAE G +E S+E+ ++ +ECNPNI+PD F A VFV+V ++ +EV+SQ L+ L DA+K + +K Sbjct: 1 MRGIGALCCALAAVHGVT--GFVAPLSPRGFGQQQTARAFSAPSSSQQPAAARLRMVATDLPKFTVSLMDDTRVSFHMDEKDVRKLADVVNNILRSFKRLK-ANAAEG--GKPYKEDSVEYKDTIDGLNIVVECNPNIFPDPFKAQVFVRVYDDKMEVSSQAMLTKLTDAIKQHLALFK 174
BLAST of NO05G00990 vs. NCBI_GenBank
Match: XP_005708867.1 (hypothetical protein isoform 1 [Galdieria sulphuraria] >EME32347.1 hypothetical protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 67.4 bits (163), Expect = 5.200e-8 Identity = 36/120 (30.00%), Postives = 62/120 (51.67%), Query Frame = 0 Query: 45 SAVVVETFILPMGDDSRLKIRCESETFKDLALRVNALLASFRNIKAANAAEDKKGPAPREPSLEFLTKNFETHLEMECNPNIYPDAFHATVFVKVKNEVLEVTSQCQLSALVDALKLYKQ 165 + V +P+ DD++L L ++N L+ SFRN A A K +P+ E+ + + MECNPN++ AF A V+++V ++ + V SQ L+ L+D L+ +K+ Sbjct: 54 NVAVTRPLTIPLQDDTQLTFMFSYADMLQLVEKLNQLVLSFRNAAEATAQRKK----TVQPTFEYYCQRNGLFIHMECNPNLFTSAFQAKVYIRVYDDKIRVHSQASLTTLMDVLRKWKR 169 The following BLAST results are available for this feature:
BLAST of NO05G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00990 ID=NO05G00990|Name=NO05G00990|organism=Nannochloropsis oceanica|type=gene|length=1033bpback to top protein sequence of NO05G00990.1 >NO05G00990.1-protein ID=NO05G00990.1-protein|Name=NO05G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
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