NO05G00880, NO05G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00880 vs. NCBI_GenBank
Match: EWM28214.1 (wd40 repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 255.8 bits (652), Expect = 1.400e-64 Identity = 153/235 (65.11%), Postives = 169/235 (71.91%), Query Frame = 0 Query: 15 FPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLWGAAREGGRVGEVWRCEYHTEFVQGLDFDLFMPGRIATCSWDRRVCVWRMP 250 +P EH AE SSV P+SL+TY GH G CVY + S XXXXXXXXXXXXXXXXXXXXXXXXXXX EGG VQVVRAHEGEVL+ADWDKY +++VY+GGVDRS+KIWDLRRPSLPL FLHGHG+AVRRLK SPHQ ++GSVSYDMS R+WG R GGR GE+WRCE HTEFVQGLDF LF PGRIATC WDRRVCVW +P Sbjct: 116 YPVAHWQEHSAEVSSVXXXXXXXXXXXXXXXXXXXXXXXXHHPTSLSTYCGHTG-CVYAGIHSPRHPHXXXXXXXXXXXXXXXXXXXXXXXXXXXLGR--AEGGAVQVVRAHEGEVLSADWDKYQDFLVYTGGVDRSIKIWDLRRPSLPLGFLHGHGYAVRRLKTSPHQEGVLGSVSYDMSCRVWGPTRAGGRAGELWRCEEHTEFVQGLDFHLFWPGRIATCGWDRRVCVWTLP 347
BLAST of NO05G00880 vs. NCBI_GenBank
Match: ORY17722.1 (WD40 repeat-like protein [Rhizoclosmatium globosum]) HSP 1 Score: 180.6 bits (457), Expect = 5.900e-42 Identity = 91/236 (38.56%), Postives = 123/236 (52.12%), Query Frame = 0 Query: 8 EYSLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLWGAAREGGRVGEVWRCEYHTEFVQGLDFDLFMPGRIATCSWDRRV 244 + L + FP L HEH E SV+WNLV K+ F+S SWD SIK W P S++T+ H +CVY+ VWS ++ AH EVL+ DW+KY+ + + GVD SVK+WD+R S L L GH +AVRR+K SPH G ++ S YDM+ R+W +R + V + HTEFV G+DF LF+ G +ATC+WD V Sbjct: 102 DLGLKVTFPVLNLHEHTREVFSVNWNLVRKDVFVSGSWDHSIKLWSPDSNHSISTWKEH-AACVYSTVWSPHSPDRF--------------------------------ASASGILLAHTNEVLSLDWNKYDPNCLVTAGVDHSVKVWDIRNTSKDLLTLRGHDYAVRRVKCSPHAGNIVASAGYDMTMRMWDTSRGFNNLVRVH--DRHTEFVLGVDFSLFVKGLVATCAWDETV 302
BLAST of NO05G00880 vs. NCBI_GenBank
Match: ORY29931.1 (WD40 repeat-like protein [Rhizoclosmatium globosum]) HSP 1 Score: 176.8 bits (447), Expect = 8.500e-41 Identity = 90/229 (39.30%), Postives = 118/229 (51.53%), Query Frame = 0 Query: 15 FPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLWGAAREGGRVGEVWRCEYHTEFVQGLDFDLFMPGRIATCSWDRRV 244 FP L HEH E SV+WNLV K+ F+S SWD SIK W P S++T+ H +CVY+ VWS AH EVL+ DW+KY+ + + GVD SVK+WD+R S L L GH +AVRR+K SPH G ++ S YDM+ R+W +R + V + HTEFV G+DF LF+ G +ATC+WD V Sbjct: 108 FPVLNLHEHTREVFSVNWNLVRKDVFVSGSWDHSIKLWSPDSNHSISTWKEH-AACVYSTVWSPHSPDRFASASGD--------------------------------TTAHTNEVLSLDWNKYDPNCLVTAGVDHSVKVWDIRNTSKDLLTLRGHDYAVRRVKCSPHAGNIVASAGYDMTMRMWDTSRGFNNLVRVH--DRHTEFVLGVDFSLFVKGLVATCAWDETV 301
BLAST of NO05G00880 vs. NCBI_GenBank
Match: XP_007759883.1 (hypothetical protein A1O7_07696 [Cladophialophora yegresii CBS 114405] >EXJ57349.1 hypothetical protein A1O7_07696 [Cladophialophora yegresii CBS 114405]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 96/247 (38.87%), Postives = 122/247 (49.39%), Query Frame = 0 Query: 10 SLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVW--------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW-GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 SL+ FP K EH EA S WNL K TF SSSWDG++K W+P R SL T H SC Y+ W S G G +Q E LT DW+KY VV +GGVDR ++ +D+R+P PL L GHG+AVR++ SPH +L+ S SYDM+ R+W +GG E+ HTEFV G+D+ LF G A+C WD R+CVW Sbjct: 90 SLAPEFPIAKFEEHSREAFSCSWNLTSKATFASSSWDGTVKIWNPERQQSLLTLPTH--SCTYSVQWNPHNDGMLSAVCSDSHLRVWDLRTPASASNHLVLQIPIHAAPLSAGAGMGKIQPT-FPPAEALTHDWNKYRGTVVATGGVDRIIRTFDIRQPKGPLQLLQGHGYAVRKVAWSPHLPDLLLSASYDMTCRVWTDGGEQGGPARELGSMGRHTEFVTGVDWCLFGSEGWAASCGWDERLCVW 333
BLAST of NO05G00880 vs. NCBI_GenBank
Match: KIW65971.1 (hypothetical protein PV04_08184 [Phialophora americana]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 96/247 (38.87%), Postives = 122/247 (49.39%), Query Frame = 0 Query: 10 SLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVW--------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW-GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 SL+ FP K EH EA S WNL K TF SSSWDG++K W+P R SL T H SC Y+ W S G G +Q E LT DW+KY VV +GGVDR ++ +D+R+P PL L GHG+AVR++ SPH +L+ S SYDM+ R+W +GG E+ HTEFV G+D+ LF G A+C WD R+CVW Sbjct: 90 SLAPEFPIAKFEEHSREAFSCSWNLTSKATFASSSWDGTVKIWNPERQQSLLTLPTH--SCTYSVQWNPHNDGMLSAVCSDSHLRVWDLRTPASASNHLVLQIPIHAAPLSAGAGVGKIQPT-FPPAEALTHDWNKYRGTVVATGGVDRIIRTFDIRQPKGPLQLLQGHGYAVRKVAWSPHLPDLLLSASYDMTCRVWTDGGEQGGPARELGSMGRHTEFVTGVDWCLFGSEGWAASCGWDERLCVW 333
BLAST of NO05G00880 vs. NCBI_GenBank
Match: XP_013270320.1 (hypothetical protein Z518_06736 [Rhinocladiella mackenziei CBS 650.93] >KIX03184.1 hypothetical protein Z518_06736 [Rhinocladiella mackenziei CBS 650.93]) HSP 1 Score: 168.3 bits (425), Expect = 3.000e-38 Identity = 95/248 (38.31%), Postives = 124/248 (50.00%), Query Frame = 0 Query: 10 SLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAH-EGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW-GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVWRMPF 251 SL+ FP EH EA S WNL K TF SSSWDG++K W+P R SL T H SC Y+ WS + GM ++ E LT DW+KY VV + GVDR ++ +D+R+P PL L GHG+AVR++ SPH +L+ S SYDM+ R+W +G R E+ R HTEFV G+D+ LF G A+C WD R+CVW + F Sbjct: 90 SLTPEFPIATFQEHSREAFSCSWNLTSKATFSSSSWDGTVKIWNPERQQSLLTLPTH--SCTYSTQWSPHTDGVLSAVCSDSHLRVWDLRTPASASNHLTLQIPIHSAPLSAGMGKIQPTFPPAEALTHDWNKYRGTVVATAGVDRIIRTFDIRQPKGPLQMLQGHGYAVRKVAWSPHLPDLLLSASYDMTCRVWTDGGDQGARARELGRMGRHTEFVTGVDWCLFGSEGWAASCGWDERLCVWDVLF 335
BLAST of NO05G00880 vs. NCBI_GenBank
Match: OCT47034.1 (Peroxisomal targeting signal 2 receptor [Cladophialophora carrionii]) HSP 1 Score: 167.9 bits (424), Expect = 3.900e-38 Identity = 96/247 (38.87%), Postives = 122/247 (49.39%), Query Frame = 0 Query: 10 SLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVW--------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW-GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 SL+ FP K EH EA S WNL K TF SSSWDG++K W+P R SL T H SC Y+ W S G G +Q E LT DW+KY VV +GGVDR ++ +D+R+P PL L GHG+AVR++ SPH +L+ S SYDM+ R+W +GG E+ HTEFV G+D+ LF G A+C WD R+CVW Sbjct: 90 SLAPEFPIAKFEEHSREAFSCSWNLTSKATFASSSWDGTVKIWNPERQQSLLTLPTH--SCTYSVQWNPHNDGMLSAVCSDSHLRVWDLRTPASASNHLILQIPIHAAPLAAGAGIGKIQPT-FPPAEALTHDWNKYRGTVVATGGVDRIIRTFDIRQPKGPLQLLQGHGYAVRKVAWSPHLPDLLLSASYDMTCRVWTDGGEQGGPARELGSMGRHTEFVTGVDWCLFGSEGWAASCGWDERLCVW 333
BLAST of NO05G00880 vs. NCBI_GenBank
Match: XP_008724957.1 (hypothetical protein G647_02386 [Cladophialophora carrionii CBS 160.54] >ETI25612.1 hypothetical protein G647_02386 [Cladophialophora carrionii CBS 160.54]) HSP 1 Score: 166.4 bits (420), Expect = 1.100e-37 Identity = 93/246 (37.80%), Postives = 122/246 (49.59%), Query Frame = 0 Query: 10 SLSILFPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWS------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAH-EGEVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW-GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 SL+ FP K EH EA S WNL K TF SSSWDG++K W+P R SL T H SC Y+ W+ G+ ++ E LT DW+KY VV +GGVDR ++ +D+R+P PL L GHG+AVR++ SPH +L+ S SYDM+ R+W +GG E+ HTEFV G+D+ LF G A+C WD R+CVW Sbjct: 90 SLAPEFPIAKFEEHSREAFSCSWNLTSKATFASSSWDGTVKIWNPERQQSLLTLPTH--SCTYSVQWNPHNDGMLSAVCSDSHLRVWDLRTPASASNHLILQIPIHAAPLSAGAGIAKIQPTFPPAEALTHDWNKYRGTVVATGGVDRIIRTFDIRQPKGPLQLLQGHGYAVRKVAWSPHLPDLLLSASYDMTCRVWTDGGEQGGPARELGSMGRHTEFVTGVDWCLFGSEGWAASCGWDERLCVW 333
BLAST of NO05G00880 vs. NCBI_GenBank
Match: OQN99795.1 (hypothetical protein B0A48_14565 [Rachicladosporium antarcticum]) HSP 1 Score: 166.0 bits (419), Expect = 1.500e-37 Identity = 95/240 (39.58%), Postives = 125/240 (52.08%), Query Frame = 0 Query: 15 FPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEG-----EVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW--GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 FP EH E SV WNLV K TFLSSSWDG+IK W P R S+ T H SCVY+A +S V VV G E LT DW+KY + V+ + GVD ++ +DLR PS P++FL GH +AVR++ SPH +++ S SYDM+ R+W G+ +GG+ E+ R + HTEF G+D+ LF G A+C+WD RV VW Sbjct: 94 FPVAGWQEHSREVFSVHWNLVNKATFLSSSWDGTIKIWTPERKESVTTLPVH--SCVYSAQFSPHHPEIVTSVSRDSHLRVFDLRSKPSAQNHMTLAIPIHAPPKVPVVGYSSGSVGPTECLTHDWNKYRDSVLATAGVDGVIRTFDLRSPSGPVNFLTGHEYAVRKVSWSPHLSDVLLSASYDMTCRVWTDGSNDQGGQARELGRMDAHTEFAMGVDWCLFGAEGWCASCAWDERVLVW 331
BLAST of NO05G00880 vs. NCBI_GenBank
Match: OQN97571.1 (hypothetical protein B0A51_18890 [Rachicladosporium sp. CCFEE 5018]) HSP 1 Score: 165.2 bits (417), Expect = 2.600e-37 Identity = 94/240 (39.17%), Postives = 125/240 (52.08%), Query Frame = 0 Query: 15 FPSLKRHEHQAEASSVDWNLVGKNTFLSSSWDGSIKHWDPTRPSSLATYLGHDGSCVYNAVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMEGGMVQVVRAHEG-----EVLTADWDKYNEWVVYSGGVDRSVKIWDLRRPSLPLSFLHGHGFAVRRLKASPHQGELIGSVSYDMSFRLW--GAAREGGRVGEVWRCEYHTEFVQGLDFDLF-MPGRIATCSWDRRVCVW 247 FP EH E SV WNL+ K TFLSSSWDG+IK W P R S+ T H SCVY+A +S V VV G E LT DW+KY + V+ + GVD ++ +DLR PS P++FL GH +AVR++ SPH +++ S SYDM+ R+W G+ +GG+ E+ R + HTEF G+D+ LF G A+C+WD RV VW Sbjct: 94 FPVAGWQEHSREVFSVHWNLINKATFLSSSWDGTIKIWTPERKESVTTLPVH--SCVYSAQFSPHHPEIVTSVSRDSHLRVFDLRSKPSAQNHMTLAVPIHGPPKVPVVGYSSGSVGPTECLTHDWNKYRDSVLATAGVDGVIRTFDLRSPSGPVNFLTGHEYAVRKVSWSPHLSDVLLSASYDMTCRVWTDGSNDQGGQARELGRMDAHTEFAMGVDWCLFGAEGWCASCAWDERVLVW 331 The following BLAST results are available for this feature:
BLAST of NO05G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00880 ID=NO05G00880|Name=NO05G00880|organism=Nannochloropsis oceanica|type=gene|length=2217bpback to top protein sequence of NO05G00880.2 >NO05G00880.2-protein ID=NO05G00880.2-protein|Name=NO05G00880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=252bpback to top protein sequence of NO05G00880.1 >NO05G00880.1-protein ID=NO05G00880.1-protein|Name=NO05G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bpback to top Synonyms
Publications
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