NO05G00820, NO05G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00820 vs. NCBI_GenBank
Match: CBJ29350.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5 bits (236), Expect = 2.600e-16 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 88 PRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLREKERERYLATNFGHDYEDKM--VEYRREKAKEE--ARLDADRARRREE 213 P F+EN ++ G+ ++Y F C ++G G EAE L L+ YKEW YQL+P +AFEDL R +KL G+AR R L LR+ ER+R L +G + D + E R AKE A + DR RE+ Sbjct: 63 PAFSENHLVKEKGLWQIYKDFPQKCQYKGRGREAEFLRGLMVAYKEWGYQLYPGVAFEDLACRTEKLGGRARTRSLLRELRDTERDRVLEAKYGREAVDDVHAQEAARLAAKESKTAAAEGDRVEERED 191
BLAST of NO05G00820 vs. NCBI_GenBank
Match: KFV69921.1 (TIMELESS-interacting protein, partial [Picoides pubescens]) HSP 1 Score: 72.4 bits (176), Expect = 2.300e-9 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 +H P+ + +I G+ + F ++ F+G GHEAEDL L+R + WA++LFP L FED +DR++ L K V+ CL+ +R Sbjct: 69 RHMPKLDASRLISERGLPALRHMFDNV-KFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEMLGNKKEVQTCLKRIR 151
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_009902241.1 (PREDICTED: TIMELESS-interacting protein [Picoides pubescens]) HSP 1 Score: 72.4 bits (176), Expect = 2.300e-9 Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 +H P+ + +I G+ + F ++ F+G GHEAEDL L+R + WA++LFP L FED +DR++ L K V+ CL+ +R Sbjct: 67 RHMPKLDASRLISERGLPALRHMFDNV-KFKGKGHEAEDLKTLIRHMEHWAHRLFPKLQFEDFIDRVEMLGNKKEVQTCLKRIR 149
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_024579744.1 (timeless-interacting protein isoform x3 [Plasmopara halstedii] >CEG43375.1 timeless-interacting protein isoform x3 [Plasmopara halstedii]) HSP 1 Score: 72.0 bits (175), Expect = 3.000e-9 Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLREKERERYLATNFGHDYEDKMVEYRREKA 197 + R E+ +I G ++V+ TF +G EA+ L L++ YK+WA+ L+P L FED V+R + L +V+ + LREKER +YL T D +D+ + E+A Sbjct: 48 RQRNLLRESHLISAEGFQKVHRTFPYQVSADVSGREAQALASLVKMYKQWAFDLYPGLNFEDFVERTETLGKGRQVQALMMELREKERLKYLKTIIDQDEKDEKADSEGEEA 159
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_002518811.1 (PREDICTED: TIMELESS-interacting protein [Ricinus communis] >EEF43736.1 nucleic acid binding protein, putative [Ricinus communis]) HSP 1 Score: 71.6 bits (174), Expect = 4.000e-9 Identity = 31/86 (36.05%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLREK 171 + RP+ T + ++G +G+ V F +RG GHE DL L+R Y EW +L PY ++++ V ++++++ RVR CL LRE+ Sbjct: 66 RSRPKLTPDILLGDDGLGYVLRHFPRNFKYRGRGHEVSDLGNLIRLYSEWHSRLLPYYSYDEFVHKVEQVASTKRVRVCLRDLRER 151
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_008401347.1 (PREDICTED: TIMELESS-interacting protein [Poecilia reticulata]) HSP 1 Score: 71.6 bits (174), Expect = 4.000e-9 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 0 Query: 87 RPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 +P+ +I G+ + FS+ F+G GHEAEDL L++ + WA++LFP L FED +DR++KL K V+ CL+ +R Sbjct: 65 QPKLDSQRLISDRGLPALRTLFSN-ARFKGKGHEAEDLRLLMQKMENWAHRLFPKLQFEDFIDRVEKLGSKKEVQTCLKRIR 145
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_002199204.3 (PREDICTED: TIMELESS-interacting protein-like [Taeniopygia guttata]) HSP 1 Score: 71.6 bits (174), Expect = 4.000e-9 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 87 RPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 RPR +I GI + F ++ F+G GHEAEDL L++ + WA++LFP L FED +DR++ L K V+ CL+ +R Sbjct: 69 RPRLDAQRLISERGIPALRHMFDNV-KFKGKGHEAEDLKTLIQHMEHWAHRLFPQLRFEDFIDRVESLGNKKEVQTCLKRIR 149
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_012433279.1 (PREDICTED: TIMELESS-interacting protein [Taeniopygia guttata]) HSP 1 Score: 71.6 bits (174), Expect = 4.000e-9 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 87 RPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 RPR +I GI + F ++ F+G GHEAEDL L++ + WA++LFP L FED +DR++ L K V+ CL+ +R Sbjct: 69 RPRLDAQRLISERGIPALRHMFDNV-KFKGKGHEAEDLKTLIQHMEHWAHRLFPQLRFEDFIDRVESLGNKKEVQTCLKRIR 149
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_021408266.1 (TIMELESS-interacting protein isoform X1 [Lonchura striata domestica] >XP_021408267.1 TIMELESS-interacting protein isoform X1 [Lonchura striata domestica]) HSP 1 Score: 71.6 bits (174), Expect = 4.000e-9 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLR 169 + RP+ +I GI + F ++ F+G GHEAEDL L++ + WA++LFP L FED VDR++ L K V+ CL+ +R Sbjct: 67 RQRPKLDAQRLISERGIPALRHMFDNV-KFKGKGHEAEDLKTLIQHMEHWAHRLFPQLRFEDFVDRVESLGNKKEVQTCLKRIR 149
BLAST of NO05G00820 vs. NCBI_GenBank
Match: XP_016193124.1 (TIMELESS-interacting protein [Arachis ipaensis]) HSP 1 Score: 71.2 bits (173), Expect = 5.200e-9 Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 85 KHRPRFTENDVIGFNGIERVYATFSSLCPFRGAGHEAEDLHRLLRCYKEWAYQLFPYLAFEDLVDRMQKLSGKARVRQCLEGLREK 171 + RP+ T + ++ +G+ V F +RG GHE +DL LLR Y EW +L PY +F++ V +++K++ RV+ CL LRE+ Sbjct: 74 RSRPKLTPDLLLSDDGLGYVLRYFPREFKYRGRGHEVQDLGNLLRMYTEWHSRLIPYYSFDEFVLKVEKVAATKRVKMCLRDLRER 159 The following BLAST results are available for this feature:
BLAST of NO05G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00820 ID=NO05G00820|Name=NO05G00820|organism=Nannochloropsis oceanica|type=gene|length=955bpback to top protein sequence of NO05G00820.1 >NO05G00820.1-protein ID=NO05G00820.1-protein|Name=NO05G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
|