NO05G00760, NO05G00760 (gene) Nannochloropsis oceanica

Overview
NameNO05G00760
Unique NameNO05G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1589
Alignment locationchr5:244845..246433 -

Link to JBrowse

Properties
Property NameValue
DescriptionOrnithine decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:244845..246433 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029066PLP-binding_barrel
IPR009006Ala_racemase/Decarboxylase_C
IPR022643De-COase2_C
IPR022644De-COase2_N
IPR002433Orn_de-COase
IPR000183Orn/DAP/Arg_de-COase
Homology
BLAST of NO05G00760 vs. NCBI_GenBank
Match: EWM28263.1 (ornithine decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 798.9 bits (2062), Expect = 9.200e-228
Identity = 400/526 (76.05%), Postives = 428/526 (81.37%), Query Frame = 0
Query:    1 MAEVQVDTHVRRSSLDLSMADELSGCGAVLLGAGPLSPRVLHPPPTDALPTVRTLLEQKALHEGLEDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLG---------------------EDPDIHGKAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVF------SDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSV 500
            MAEVQVDTH+RRSSLDLSM+DELS CGAVLLG GPLSPRVLHPPPTD+LP+VRTLLE KALHEGLEDAFFVADLGA+IRQH+KWQRCLPRVEPFYA+KCNTDPEVLRTLLPLCAGFDCASKGEIETML +GV+PSNIIYANPCK PEH+RYARDHGVHLMTFDNADELAKVKAINP AKMVLRILTDDSKSVCRFGTKFGAHLPAT PLLQTARHLG+DVVGVSFHVGSGCQDPMAFDDAVRRAK+VFEEGARLG                     +DPDIHGKAEGSVTFE IAAVLGKAI THFPDPAVRVIAEPGR+YVAPAFTLATTITSRRAV+       D++ AA+DS L  R                                    ESG EG  ++     +       + E+KSFMYYVNDGVYGSFNCLLFDHAQAFPKVL+AK+R VRHKES W+G WYECSVWGPTCDSMDCISKKTLLPE+ IGDWLYFEEMGAYTL+AASRFNGFELS V
Sbjct:    1 MAEVQVDTHLRRSSLDLSMSDELSPCGAVLLGPGPLSPRVLHPPPTDSLPSVRTLLEHKALHEGLEDAFFVADLGAVIRQHKKWQRCLPRVEPFYAVKCNTDPEVLRTLLPLCAGFDCASKGEIETMLGMGVSPSNIIYANPCKSPEHIRYARDHGVHLMTFDNADELAKVKAINPQAKMVLRILTDDSKSVCRFGTKFGAHLPATYPLLQTARHLGLDVVGVSFHVGSGCQDPMAFDDAVRRAKKVFEEGARLGYRFSLLDVGGGFPGSEKRHTADDPDIHGKAEGSVTFEAIAAVLGKAIYTHFPDPAVRVIAEPGRYYVAPAFTLATTITSRRAVYHPAVAAGDSLNAANDSTLPQR--------AVSMDCGPAEVGEGGRADGGKPGGVLIEESGAEGPRQETAQGTLS------AGEDKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLSAKARPVRHKESAWVGAWYECSVWGPTCDSMDCISKKTLLPEMMIGDWLYFEEMGAYTLSAASRFNGFELSHV 512          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: XP_016606655.1 (hypothetical protein SPPG_06296 [Spizellomyces punctatus DAOM BR117] >KNC98615.1 hypothetical protein SPPG_06296 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 429.1 bits (1102), Expect = 1.900e-116
Identity = 226/447 (50.56%), Postives = 283/447 (63.31%), Query Frame = 0
Query:   66 EDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGED---PDIHGKAEGS----VTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            +D+FFV DLG + RQH +W++ LPRVEPFYA+KCN D  VL+TL  L  GFDCASKGEI+  L  GV+PS IIYANPCK   H+R+A   GV +MTFDNADEL KVKAI+PNA+M+LRILTDDS+S+C+ G KFGA + A   LL+ AR L MDV+G+SFHVGSGC D  AF +AV  A++ F+EG   G D    D+ G   G+    V+F++IAAVLG AI  HF  P VRVIAEPGR+YV+ AFTLA  + +RR V  D  ++A D                                          ES       + DH               S+MYY+NDG+YGSFNC+ FDHA   P VL A+S A  +K ++   + + CSVWGPTCDS+DCI K   LPE+ +GDWL+F+ MGAYT+ AAS+FNGF+ S V YTNTE
Sbjct:   68 QDSFFVGDLGEVARQHAQWKQLLPRVEPFYAVKCNPDTMVLKTLTSLGTGFDCASKGEIQMALDQGVHPSKIIYANPCKQASHIRFAAATGVRMMTFDNADELRKVKAIHPNAQMILRILTDDSRSICKLGVKFGAPMAAVPHLLKAARELDMDVIGISFHVGSGCFDASAFGEAVMLARKAFDEGKAWGYDFHLLDVGGGFPGNNAPGVSFQQIAAVLGPAIDQHF-GPEVRVIAEPGRYYVSSAFTLAVNVIARRVVPRDRKSSAID------------------------------------------ESEASAVATRDDH--------------PSYMYYINDGMYGSFNCITFDHAVVTPNVL-ARSGAFMYKHAIQEAE-FPCSVWGPTCDSIDCIGKGFSLPEMQVGDWLHFDNMGAYTMCAASQFNGFKKSPVVYTNTE 455          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: GAO52257.1 (hypothetical protein G7K_6338-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 417.9 bits (1073), Expect = 4.400e-113
Identity = 226/444 (50.90%), Postives = 276/444 (62.16%), Query Frame = 0
Query:   66 EDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGEDPDI--HGKAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGD-WYECSVWGPTCDSMDCISKKTLLP-ELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            E+ FFVAD+G + RQH +W+R LPRVEPFYA+KCN DP+V+R L  L  GFDCASK EI+ +L+LGV  + IIYANPCK   H+++A ++GV +MTFDNADEL K+K + P A ++LRILTDDSKS+C+ G KFGA L  TLPLL+ A+ L +D+VGVSFHVGSG  DP AF DAV RA+ VF+E A +G D  +   G   G   FE IAAVLG AI  HFP   +RVIAEPGR+YVA AFTLA  I +RR V                                                     +  EG    AD               KS+MYYV+DGVYGSFNC+LFDH    P+VLA   R + ++     GD    CSVWGPTCDS+DCIS+++ LP  L +GDWLYFEEMGAYT  AASRFNGF +S V Y N+E
Sbjct:  122 ENGFFVADVGEVYRQHLRWKRNLPRVEPFYAVKCNPDPQVVRLLASLGTGFDCASKAEIQQVLSLGVPENKIIYANPCKAASHIKFAANNGVRMMTFDNADELHKIKRLYPGASLLLRILTDDSKSLCQLGLKFGAPLDTTLPLLKLAKELELDIVGVSFHVGSGSWDPSAFVDAVERARCVFDEAASVGYDLKLLDVGGGFGHDNFETIAAVLGPAIDQHFPS-TIRVIAEPGRYYVANAFTLAVNIIARRTV-----------------------------------------------------ANQEGEAGLAD---------------KSYMYYVSDGVYGSFNCILFDHQHPVPRVLAHDGRFLYNEAR---GDSSVRCSVWGPTCDSLDCISEESFLPYALDVGDWLYFEEMGAYTGCAASRFNGFPISRVQYVNSE 493          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: XP_019022806.1 (hypothetical protein SAICODRAFT_31069 [Saitoella complicata NRRL Y-17804] >ODQ51693.1 hypothetical protein SAICODRAFT_31069 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 417.9 bits (1073), Expect = 4.400e-113
Identity = 226/444 (50.90%), Postives = 276/444 (62.16%), Query Frame = 0
Query:   66 EDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGEDPDI--HGKAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGD-WYECSVWGPTCDSMDCISKKTLLP-ELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            E+ FFVAD+G + RQH +W+R LPRVEPFYA+KCN DP+V+R L  L  GFDCASK EI+ +L+LGV  + IIYANPCK   H+++A ++GV +MTFDNADEL K+K + P A ++LRILTDDSKS+C+ G KFGA L  TLPLL+ A+ L +D+VGVSFHVGSG  DP AF DAV RA+ VF+E A +G D  +   G   G   FE IAAVLG AI  HFP   +RVIAEPGR+YVA AFTLA  I +RR V                                                     +  EG    AD               KS+MYYV+DGVYGSFNC+LFDH    P+VLA   R + ++     GD    CSVWGPTCDS+DCIS+++ LP  L +GDWLYFEEMGAYT  AASRFNGF +S V Y N+E
Sbjct:   69 ENGFFVADVGEVYRQHLRWKRNLPRVEPFYAVKCNPDPQVVRLLASLGTGFDCASKAEIQQVLSLGVPENKIIYANPCKAASHIKFAANNGVRMMTFDNADELHKIKRLYPGASLLLRILTDDSKSLCQLGLKFGAPLDTTLPLLKLAKELELDIVGVSFHVGSGSWDPSAFVDAVERARCVFDEAASVGYDLKLLDVGGGFGHDNFETIAAVLGPAIDQHFPS-TIRVIAEPGRYYVANAFTLAVNIIARRTV-----------------------------------------------------ANQEGEAGLAD---------------KSYMYYVSDGVYGSFNCILFDHQHPVPRVLAHDGRFLYNEAR---GDSSVRCSVWGPTCDSLDCISEESFLPYALDVGDWLYFEEMGAYTGCAASRFNGFPISRVQYVNSE 440          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: EXX78010.1 (ornithine decarboxylase SPE1 [Rhizophagus irregularis DAOM 197198w] >PKC12942.1 ornithine decarboxylase [Rhizophagus irregularis] >PKC67858.1 ornithine decarboxylase [Rhizophagus irregularis] >PKK75259.1 ornithine decarboxylase [Rhizophagus irregularis] >PKY19049.1 ornithine decarboxylase [Rhizophagus irregularis] >PKY25212.1 ornithine decarboxylase [Rhizophagus irregularis] >POG64193.1 ornithine decarboxylase [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 414.5 bits (1064), Expect = 4.900e-112
Identity = 223/478 (46.65%), Postives = 293/478 (61.30%), Query Frame = 0
Query:   44 PPTDALPTVRTLLEQKALHEGLE----DAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGED---PDIHG------KAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQV---SSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            PP   L +V  +L+ + L    E    DAFFVADLG I RQH +W+  LPRVEPFYA+KCN DP +LR L  L  GFDCASK EI+T+L +GV+PSNIIYANPCK    +R+A +H V ++TFDNADEL K+K + P A++V+RIL DDSK++ + G KFGA L  T  LL+TA  LG++V+GVSFHVGSGC D  ++ DA+RRA+ VF + + +G D    D+ G      K++  +TFE+IAAVLG AI  HFP P +RVIAEPGR+Y APAFT+AT + ++R V  D                                                        G +     M + Q  V     +  +FMYY+NDG+YGSFNC+L+DH    PKVL  K  +    E +   + Y C +WGPTCDS+DC++K   LPEL +GDWLYFE+MGAYT+AAA++FNGF+ + V YT T+
Sbjct:   16 PPISML-SVEEVLKSQILSNNYETENNDAFFVADLGEIYRQHLRWKTYLPRVEPFYAVKCNGDPMLLRLLAALGTGFDCASKNEIQTVLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRILADDSKALIKLGAKFGASLNDTGFLLKTALELGLNVIGVSFHVGSGCYDENSYIDAIRRARFVFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFP-PNIRVIAEPGRYYAAPAFTIATHVIAKRTVCRD--------------------------------------------------------GNEEYVPSMNVDQSNVLATKDDHPTFMYYINDGLYGSFNCILYDHQLVTPKVL-TKGGSFLFGEILDEPE-YNCFIWGPTCDSIDCVTKNGSLPELFLGDWLYFEDMGAYTIAAATKFNGFKQTQVIYTTTD 433          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: PKY41261.1 (ornithine decarboxylase [Rhizophagus irregularis])

HSP 1 Score: 414.1 bits (1063), Expect = 6.400e-112
Identity = 223/478 (46.65%), Postives = 293/478 (61.30%), Query Frame = 0
Query:   44 PPTDALPTVRTLLEQKALHEGLE----DAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGED---PDIHG------KAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQV---SSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            PP   L +V  +L+ + L    E    DAFFVADLG I RQH +W+  LPRVEPFYA+KCN DP +LR L  L  GFDCASK EI+T+L +GV+PSNIIYANPCK    +R+A +H V ++TFDNADEL K+K + P A++V+RIL DDSK++ + G KFGA L  T  LL+TA  LG++V+GVSFHVGSGC D  ++ DA+RRA+ VF + + +G D    D+ G      K++  +TFE+IAAVLG AI  HFP P +RVIAEPGR+Y APAFT+AT + ++R V  D                                                        G +     M + Q  V     +  +FMYY+NDG+YGSFNC+L+DH    PKVL  K  +    E +   + Y C +WGPTCDS+DC++K   LPEL +GDWLYFE+MGAYT+AAA++FNGF+ + V YT T+
Sbjct:   16 PPISML-SVEEVLKSQILSNNYETENNDAFFVADLGEIYRQHLRWKTYLPRVEPFYAVKCNGDPMLLRLLAALGTGFDCASKNEIQTVLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRILADDSKALIKLGAKFGASLNDTGFLLKTALELGLNVIGVSFHVGSGCYDENSYIDAIRRARFVFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFP-PNIRVIAEPGRYYAAPAFTIATHVIAKRTVCRD--------------------------------------------------------GNEEYVPSMNVDQSNVLATKDDHPTFMYYINDGLYGSFNCILYDHQLVTPKVL-TKGGSFLFGEILDEPE-YNCFIWGPTCDSIDCVTKNGSLPELFLGDWLYFEDMGAYTIAAATKFNGFKQTPVIYTTTD 433          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: KXS20881.1 (ornithine decarboxylase [Gonapodya prolifera JEL478])

HSP 1 Score: 412.1 bits (1058), Expect = 2.400e-111
Identity = 221/462 (47.84%), Postives = 282/462 (61.04%), Query Frame = 0
Query:   52 VRTLLEQKALHEGLEDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGEDP---DIHGKAEGS----VTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTEA 507
            +RT  E   + EG EDAFFV DLG+I+RQ  KW+R LPRVEPFYA+KCN D  V++ L+ L AGFDCAS+ EIET+L+LGV+P  IIYANPCK   H++YA  +GV ++TFDNADEL KVK  +P+A++VLRIL DDSKS+C+ G KFGA       LL+ A+ L + VVGVSFHVGSGC D MAF DAV  A++VF+EG   G +    D+ G   G+    +TFE+IA VLG  I   FP P+VRVIAEPGR++V+ AFTLA  + +RR + S                                                        +G +    +MG       +E   FMYY+NDG+YGSFN ++FDHA A P+VL      +    S      +ECS+WGPTCDS+DCI+K   LP + +GDWLYF +MGAYTL AAS FNGF  S + +T TEA
Sbjct:   45 LRTRTETPGMMEGDEDAFFVCDLGSIVRQFAKWKRLLPRVEPFYAVKCNPDRTVVKQLVALGAGFDCASRTEIETVLSLGVSPHEIIYANPCKQISHLKYAATNGVKMLTFDNADELRKVKKTHPDAELVLRILADDSKSLCKLGLKFGASPSTASGLLRLAKELDLKVVGVSFHVGSGCFDAMAFRDAVVAARKVFDEGEAQGFEMKLLDVGGGFPGANSDGITFEQIATVLGPTIDKLFP-PSVRVIAEPGRYFVSAAFTLAVNVVARRVLTS--------------------------------------------------------NGDETSVDEMG-----APTENTKFMYYINDGMYGSFNNIMFDHAVASPQVLRKDGEYLYENSS--SESVFECSLWGPTCDSIDCIAKTARLPIMDVGDWLYFSDMGAYTLCAASNFNGFRKSPIVFTQTEA 442          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: ORX71318.1 (ornithine decarboxylase [Linderina pennispora])

HSP 1 Score: 410.2 bits (1053), Expect = 9.200e-111
Identity = 226/479 (47.18%), Postives = 278/479 (58.04%), Query Frame = 0
Query:   38 PRVLHPPPTDALPTVRTLLEQKALHEGLEDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLG---EDPDIHGKAEG-----SVTFEEIAAVLGKAIQTHFPD-PAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTEAM 508
            PR+ H    DA       L+ K      EDAFFVADLG + RQ  +W R LPRV+PF+A+KCN DP V++ L  L AGFDCASK EI+ +L  G  PSNI+YA+PCKP  H+R+A+ + V +MTFDNADEL K++   P AK +LRILTDDS S+C+ G KFGA L  T  LL TA+ LG++VVGVSFHVGSGCQ   AF DAV RA++VF++ A LG   E  DI G   G      + FE++A VL  AI  +F D P++R+IAEPGR++VA AFTLA  I +RR V     TA                                                                      E  +FMYYVNDGVYGSFNC++FDH    P+VL A S+ +       LG  +E SVWGPTCDS+DCI    +LPEL IGDWL F+ MGAYT  AASRFNGF LS + Y +TE M
Sbjct:    2 PRISHGNIADA-------LQAKLSQPDAEDAFFVADLGEVARQFYRWVRHLPRVQPFFAVKCNPDPLVIKLLHRLGAGFDCASKAEIQQVLGEGAQPSNIVYAHPCKPASHLRFAKANDVAMMTFDNADELYKLQQQYPGAKAILRILTDDSHSLCQLGLKFGAALDTTQRLLATAKQLGINVVGVSFHVGSGCQSEHAFSDAVMRARQVFDQAAALGFNLELLDIGGGFPGRGDASGLAFEDVARVLTAAIDKYFADMPSLRIIAEPGRYFVASAFTLAVNIVARRQVGVLNNTA------------------------------------------------------------------PTGDENPAFMYYVNDGVYGSFNCIMFDHQHPVPRVLTANSQFINAPADAQLGMMFESSVWGPTCDSIDCIMPSGMLPELQIGDWLVFDGMGAYTNCAASRFNGFRLSDMVYVDTEGM 407          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: OZJ04325.1 (hypothetical protein BZG36_03159 [Bifiguratus adelaidae])

HSP 1 Score: 410.2 bits (1053), Expect = 9.200e-111
Identity = 213/455 (46.81%), Postives = 279/455 (61.32%), Query Frame = 0
Query:   67 DAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGED---PDIHGKAEGS-----VTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQVSSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAV---------RHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNT 505
            DAF+VADLG + RQH +W+  LPR+EPFYA+KCN DP+V++ L  L  GFDCASK EI+ +L LGV+PS IIYANPCK    VRYA ++ V +MTFDN +EL K+K + P A +VLRILTDDSKS+C+ G KFGA L +   LL+TA+ L ++V+GVSFHVGSGC D  AF+DAV RA+ VF+ G  LG D    D+ G   G+     +TF ++AA+LG A+  HFPDPA+RVIAEPGR+Y A AFTLAT+I +RR V  D    A D                                              +  G   D++ +      +  +  ++MYY+NDG+YGSFNC++FDH Q  PK+L    + +          H  +      ++ S+WGPTCDS+DC+ KK  + +L +GDWL +E MGAYT AA S FNGFE  SVFYT T
Sbjct:   70 DAFYVADLGEVWRQHWRWKELLPRIEPFYAVKCNPDPKVVKLLADLGIGFDCASKNEIKQVLDLGVDPSRIIYANPCKQSSFVRYATNNDVRMMTFDNTEELHKIKKLFPEAHLVLRILTDDSKSLCQLGLKFGAPLDSCRHLLETAQALDLNVIGVSFHVGSGCYDEHAFEDAVLRARHVFDLGLELGFDFRFLDVGGGFPGADVQEGITFSKVAAILGPAVDRHFPDPAIRVIAEPGRYYAASAFTLATSIIARRTVLRDHSAVAKDQH--------------------------------------------DCQGSVGDNEVINDSSPSM-DDHPAYMYYINDGMYGSFNCIMFDHQQPVPKILQKGGKYIYSPYNPPYTSHDNT----QVFDTSIWGPTCDSIDCVVKKCEMDQLDVGDWLVWENMGAYTAAAGSAFNGFERVSVFYTFT 475          
BLAST of NO05G00760 vs. NCBI_GenBank
Match: ADI24234.1 (ornithine decarboxylase [Rhizophagus intraradices])

HSP 1 Score: 409.1 bits (1050), Expect = 2.100e-110
Identity = 221/478 (46.23%), Postives = 291/478 (60.88%), Query Frame = 0
Query:   44 PPTDALPTVRTLLEQKALHEGLE----DAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCNTDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVRYARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFGAHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEEGARLGED---PDIHG------KAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFYVAPAFTLATTITSRRAVFSDAMTAADDSKLEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGTEGSGKQADHQKMGLRQVQV---SSEEKSFMYYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVWGPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVFYTNTE 506
            PP   L +V  +L+ + L    E    DAFFVADLG I RQH +W+  LPRVEPFYA+KCN DP +LR L  L  GFDCASK EI+T+L +GV+PSNIIYANPCK    +R+A +H V ++TFDNADEL K+K + P A++V+RIL DDSK++ + G KFGA L  T  LL+TA  LG++V+GVSFHVGSGC D  ++ DA+RRA+ VF + + +G D    D+ G      K++  +TFE+IAAVLG AI  HFP P +RVIAEPGR+Y APAFT+AT + ++R V  D                                                        G +     M + Q  V     +  +FMYY+NDG+YGS  C+L+DH    PKVL  K  +    E +   + Y C +WGPTCDS+DC++K   LPEL +GDWLYFE+MGAYT+AAA++FNGF+ + V YT T+
Sbjct:   16 PPISML-SVEEVLKSQILSNNYETENNDAFFVADLGEIYRQHLRWKTYLPRVEPFYAVKCNGDPMLLRLLAALGTGFDCASKNEIQTVLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRILADDSKALIKLGAKFGASLNDTGFLLKTALELGLNVIGVSFHVGSGCYDENSYIDAIRRARFVFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFP-PNIRVIAEPGRYYAAPAFTIATHVIAKRTVCRD--------------------------------------------------------GNEEYVPSMNVDQSNVLATKDDHPTFMYYINDGLYGSLYCILYDHQLVTPKVL-TKGGSFLFGEILDEPE-YNCFIWGPTCDSIDCVTKNGSLPELFLGDWLYFEDMGAYTIAAATKFNGFKQTQVIYTTTD 433          
The following BLAST results are available for this feature:
BLAST of NO05G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28263.19.200e-22876.05ornithine decarboxylase [Nannochloropsis gaditana][more]
XP_016606655.11.900e-11650.56hypothetical protein SPPG_06296 [Spizellomyces pun... [more]
GAO52257.14.400e-11350.90hypothetical protein G7K_6338-t1 [Saitoella compli... [more]
XP_019022806.14.400e-11350.90hypothetical protein SAICODRAFT_31069 [Saitoella c... [more]
EXX78010.14.900e-11246.65ornithine decarboxylase SPE1 [Rhizophagus irregula... [more]
PKY41261.16.400e-11246.65ornithine decarboxylase [Rhizophagus irregularis][more]
KXS20881.12.400e-11147.84ornithine decarboxylase [Gonapodya prolifera JEL47... [more]
ORX71318.19.200e-11147.18ornithine decarboxylase [Linderina pennispora][more]
OZJ04325.19.200e-11146.81hypothetical protein BZG36_03159 [Bifiguratus adel... [more]
ADI24234.12.100e-11046.23ornithine decarboxylase [Rhizophagus intraradices][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003797NSK003797Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00760.1NO05G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583631gene_2868Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100004g4gene2269Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00760.1NO05G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00760 ID=NO05G00760|Name=NO05G00760|organism=Nannochloropsis oceanica|type=gene|length=1589bp
ATGGCTGAGGTACAAGTCGACACGCACGTGCGCCGCTCCTCCCTTGACCT
TTCCATGGCTGACGAGCTTTCCGGCTGTGGCGCTGTCCTTCTTGGCGCTG
GGCCCTTGTCTCCACGTGTCCTTCACCCGCCTCCCACCGACGCCCTCCCT
ACCGTCCGCACCTTGCTAGAGCAAAAGGCCTTGCACGAGGGGTTGGAAGA
TGCCTTCTTTGTCGCTGACCTTGGGGCGATTATTCGCCAGCACCGCAAGT
GGCAACGCTGCCTTCCCCGCGTGGAGCCCTTTTACGCCATCAAGTGCAAC
ACCGACCCCGAGGTCTTGCGGACCCTCCTCCCCCTCTGCGCTGGCTTCGA
CTGCGCGAGCAAGGGAGAGATTGAGACGATGCTTGCCCTGGGTGTCAACC
CGTCCAACATTATCTATGCCAACCCCTGCAAGCCCCCGGAGCATGTGCGG
TATGCCCGCGACCATGGTGTGCACCTTATGACGTTCGACAACGCCGATGA
GCTGGCCAAGGTAAAGGCCATCAACCCGAATGCCAAGATGGTCCTGCGAA
TCCTGACTGATGACTCGAAGTCGGTCTGTCGCTTCGGTACCAAATTTGGA
GCCCATTTGCCCGCTACCCTGCCTTTGTTGCAGACGGCGCGCCACTTAGG
GATGGATGTGGTGGGGGTTTCTTTTCACGTTGGTTCCGGGTGCCAGGACC
CCATGGCTTTTGATGACGCAGTGCGCCGAGCGAAGAGGGTGTTCGAAGAA
GGGGCACGGCTCGGgtaccacttaaccttattggatgtcggggggggttc
ccagggtcggaaaaacgtcactcgagTGAGGATCCGGACATTCACGGAAA
GGCCGAGGGAAGTGTAACATTCGAGGAGATAGCCGCGGTGTTGGGCAAGG
CGATTCAGACGCATTTCCCAGACCCGGCTGTACGGGTGATTGCGGAGCCG
GGCCGCTTTTATGTGGCACCGGCGTTTACGCTCGCTACCACCATTACATC
ACGACGAGCTGTTTTCTCTGATGCGATGACGGCGGCGGATGACTCGAAGC
TCGAAGGAAGAGCATCCGCGGCTGTGGCAGCTGGGGGAGGGCGAGCGACA
TGTGCGGGTGGAATGATGACGACGACCACCACCACCACCACCACGGCCAC
GAGCGCGATGATGATTGACGAAAGCGGGACAGAAGGAAGCGGGAAGCAGG
CGGATCACCAGAAGATGGGGCTGCGCCAGGTGCAGGTTTCGAGCGAGGAG
AAGAGTTTTATGTATTATGTGAATGATGGGGTGTATGGGTCATTCAATTG
CCTGTTGTTTGACCACGCGCAGGCCTTCCCGAAGGTGCTCGCGGCCAAGT
CGCGCGCGGTCCGTCATAAGGAGAGTGTGTGGTTGGGGGATTGGTATGAA
TGCTCCGTATGGGGCCCCACGTGCGATAGCATGGATTGCATCAGCAAGAA
GACCTTGCTGCCTGAGTTGGCGATTGGGGATTGGTTGTATTTTGAGGAGA
TGGGGGCTTACACGCTCGCGGCGGCGTCGAGGTTCAACGGCTTTGAGCTC
TCCTCGGTGTTTTACACCAACACAGAGGCGATGCCATGA
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protein sequence of NO05G00760.1

>NO05G00760.1-protein ID=NO05G00760.1-protein|Name=NO05G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=509bp
MAEVQVDTHVRRSSLDLSMADELSGCGAVLLGAGPLSPRVLHPPPTDALP
TVRTLLEQKALHEGLEDAFFVADLGAIIRQHRKWQRCLPRVEPFYAIKCN
TDPEVLRTLLPLCAGFDCASKGEIETMLALGVNPSNIIYANPCKPPEHVR
YARDHGVHLMTFDNADELAKVKAINPNAKMVLRILTDDSKSVCRFGTKFG
AHLPATLPLLQTARHLGMDVVGVSFHVGSGCQDPMAFDDAVRRAKRVFEE
GARLGEDPDIHGKAEGSVTFEEIAAVLGKAIQTHFPDPAVRVIAEPGRFY
VAPAFTLATTITSRRAVFSDAMTAADDSKLEGRASAAVAAGGGRATCAGG
MMTTTTTTTTTATSAMMIDESGTEGSGKQADHQKMGLRQVQVSSEEKSFM
YYVNDGVYGSFNCLLFDHAQAFPKVLAAKSRAVRHKESVWLGDWYECSVW
GPTCDSMDCISKKTLLPELAIGDWLYFEEMGAYTLAAASRFNGFELSSVF
YTNTEAMP*
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Synonyms
Publications