NO05G00740, NO05G00740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00740 vs. NCBI_GenBank
Match: XP_002176460.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42557.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 84.0 bits (206), Expect = 2.400e-12 Identity = 66/241 (27.39%), Postives = 104/241 (43.15%), Query Frame = 0 Query: 323 WLASVLQCVECGHRRPIQNSAFIDI-ALPLSFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNV------KEAGLEGGMGSLMAKWEKDLQILTAERHRLQQLNPDEPFALPP-SLPPFSSSFTKEGRPKEEGLRR-QFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYGGGMS 555 WL S LQC C H RPIQN+AF DI +P + S L L F + E V DVEC CT ++ +++L + ++ ++ + E E G + +L+ + +Q+NPD+ + L S S +E + R K L+ +RLP +LC+H+ RR + P ++ K + VIFP ++D + AYGG +S Sbjct: 497 WLGSTLQCRICKHIRPIQNAAFFDIPVVPTTVLAS---------SGRRSYAGTPQKPESAPSPPCRLEECLERFTNVERVQDVECRCCTLRNLIEKLEEDVDFLRGAVEALHAKSKRNEHNKEDEQGFYL---RDELERTERRLNDARQINPDDDARVDAFLLSDPSDSLEGISESQETKMERVDALKCLLLTRLPSILCIHVQRRYYDPHYNRLSKTAQHVIFPEVLDAGPYCAYGGRVS 725
BLAST of NO05G00740 vs. NCBI_GenBank
Match: EWM28159.1 (usp37 protein [Nannochloropsis gaditana]) HSP 1 Score: 76.3 bits (186), Expect = 4.900e-10 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 84 WTVPGLANLGNTCFLNTVLQSLATLPPFVDSLQQAVDSHHAQESPVSRLVLECLLRLKPVAV 146 WT GL NLGNTCFLNTVLQ+LA+LPPF ++L+QA+ ++PVSRLVL L L+P + Sbjct: 58 WTTLGLVNLGNTCFLNTVLQALASLPPFKEALEQALTFRPGSDAPVSRLVLRYLHSLQPTCI 119
BLAST of NO05G00740 vs. NCBI_GenBank
Match: GAX94041.1 (Hypothetical protein PINS_001928 [Pythium insidiosum]) HSP 1 Score: 75.5 bits (184), Expect = 8.400e-10 Identity = 153/677 (22.60%), Postives = 217/677 (32.05%), Query Frame = 0 Query: 83 SWTVPGLANLGNTCFLNTVLQSLATLPPFVDSLQQAV-DSHH----AQESPVSRLVLECLLRLKPVAVXXXXXXXXXXXXXXXXXXXXXXXXXHSTAFHPMDLLQTLRIRCASFFQTHEQQDAEELLQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLKDLTQKFRGLSTFASPPSSFXXXXXXXXXXXXXXXXXXXXXXXXWLASVLQCVECGHRRPIQNSAFIDIALPL-SFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNVKEAGLEGGMGSLMAKWEKDLQILTAERHRLQQLNPDEPFALPPSLPPFSSSFTKEGRPKEEGLRRQFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYGGGMSADVALQQPMKRAGEMEVGKGGTRWRGAAMVRWQAEXXXXXXXXXXXXXXXXXXLSNGNGIHYCNEYKLSLSAPIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCYKYLLQAVIVHHGSADSGHYTAYRRLSPSPSPSTLLQTPSAEEERGGGRAGGNQDSLKVESNVWVHISDDAVAPATEEEVLESEAYLLFYQ 754 S VPGL NLGNTCF N +LQ LA++ F D L V D+ A+ P ++ + +C+ L P A + P +L L R A F+ ++QQDA+ELLQ XXXXXXXXXXXXXX + DL + + SP +LQC CG+ RP+ N F+D++L L F+ S L L + + E++ VEC CT L + E++Q ++ + E ++ L + H+L L D+P AL F + R + + KR+ FSR P +LC H R+VF K+ V FP+ +DM+ F + +QP R+ AP++ Y L AVI+HHGS SGH+TA+RR+ S W ISD V A+E+EVL S AY+LFY+ Sbjct: 9 SMAVPGLQNLGNTCFFNAILQGLASVDSFRDYLAHVVADARQVGGKARLVPFTQALFDCITDLAPTA-----------------------DDSRCSTVVPRELNDELCNRLA-LFRGNKQQDAQELLQF----LVGLVGYEHKRCTGGDRGLIDLLATRPMYGAMRSPTPTDDDGSDTSVSSXXXXXXXXXXXXXXXXSSISDLRFESAMETKRWSPMHGLQ-------------------------VDLLQCSNCGNYRPMTNRRFVDVSLSLQDFATS---------------------SSASSTSSISLWDCLRRYTAPEYLSGVECSFCTATRELAMKRKECEQLQRALQKDPDD----------IAVELEVHQLKDDIHQLDHLLQDDPSAL--------HQFLRTARCR---ALCDYTKRMQFSRCPDVLCFHFNRKVFHAWSGNTRKLDTHVAFPIELDMSPFCRF----------EQPSNRSTS------------------------------------------------------EAPAPLLGISPPPAPHLL------------------------YELTAVILHHGSDRSGHFTAFRRVR--------------------------------SSQQWFFISDATVRDASEDEVLRSCAYMLFYE 470
BLAST of NO05G00740 vs. NCBI_GenBank
Match: CBJ27154.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.2 bits (178), Expect = 4.200e-9 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 664 KYLLQAVIVHHGSADSGHYTAYRRLSPSPSPSTLLQTPSAEE--------ERGGGRAGGNQDSLKVESNVWVHISDDAVAPATEEEVLESEAYLLFYQ 754 +Y L+AVIVH GSADSGHYTA+R++ + P+ E ER GG G N++ WV+ISD+ V +E+ VL S+AY+LFY+ Sbjct: 526 EYDLRAVIVHRGSADSGHYTAFRKVDSDKGEPVEEEVPAGSERVSEAPRGERKGGGGGANKE--------WVYISDEEVERVSEKRVLSSQAYMLFYR 615
BLAST of NO05G00740 vs. NCBI_GenBank
Match: OEU16870.1 (cysteine proteinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-8 Identity = 62/248 (25.00%), Postives = 96/248 (38.71%), Query Frame = 0 Query: 323 WLASVLQCVECGHRRPIQNSAFIDIALPLSFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNVKEAGLEGGMGSLMAKWEK-------------DLQILTAERHRLQQLNPDEPFALPPSLPPF----SSSFTKEGRPKEEGL---RRQFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYG 551 WL S L+C +C H RPIQN+ F+DI L P L L F S E V DVEC CT + + L + ++ ++ ++ G K +L + +L+ ++PDE + SL SF G KE + R + +K L+ +R P +LC H+ RR + P +M K + V F +D++ + YG Sbjct: 688 WLGSTLRCSKCKHVRPIQNAPFLDIPL------VPTSVPNYLSKAYNSSTVKPVSPNTSSLLSCTLDQCLAEFTSVERVQDVECQFCTIQKEIDNLDEEAMMLRGAVETAEKRINRKNKGKHSIDTRKIDDSTEQTKYLREELSKVETILLKLKTMDPDEDDIIERSLGSIVQQKDDSFLL-GFEKETSIPIQRCEAKKCLLLTRTPSILCCHIQRRYYDPFKNRMEKCNQFVEFSQFLDLSPYCVYG 928
BLAST of NO05G00740 vs. NCBI_GenBank
Match: XP_009519589.1 (hypothetical protein PHYSODRAFT_483935 [Phytophthora sojae] >EGZ24301.1 hypothetical protein PHYSODRAFT_483935 [Phytophthora sojae]) HSP 1 Score: 70.9 bits (172), Expect = 2.100e-8 Identity = 98/432 (22.69%), Postives = 143/432 (33.10%), Query Frame = 0 Query: 326 SVLQCVECGHRRPIQNSAFIDIALPLSFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNVKEAGLEGGMGSLMAKWEKDLQILTAER----HRLQQLNPDEPFALPPSLPPFSSSFTKEGRPKEEGLRRQFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYGGGMSADVALQQPMKRAGEMEVGKGGTRWRGAAMVRWQAEXXXXXXXXXXXXXXXXXXLSNGNGIHYCNEYKLSLSAPIMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCYKYLLQAVIVHHGSADSGHYTAYRRLSPSPSPSTLLQTPSAEEERGGGRAGGNQDSLKVESNVWVHISDDAVAPATEEEVLESEAYLLFYQ 754 ++LQC C RP+ N F+D++L L L+ +H + E + DVEC C+ L+ +++ E ++ K + +M DL+I+ ER H L+Q L S F + P+ G KRL FSR P + C HL R+V+ + K++ V FPL +DM+ + Y + E + G G TR M R A +Y L Y L AVI+HHG+ GH+TAYRR SPS W +SD++V A+ EVL S AY+LFY+ Sbjct: 170 NLLQCTRCRRFRPLNNHPFLDVSLSL--------------------------VAPGDRKVSRLTDAIHLYTEPEVIKDVECSYCSVVDELE--VTRKEYAEAMKQQPKASSGSSNFDEVM-----DLEIVQHERKDWIHTLEQ--------LASSSTSFDLEQLERPIPRSRG---DCHKRLQFSRSPDVFCFHLNRKVYRRT-GGAYKLENYVEFPLELDMSVYCQY------------ELDSVTEQKPGNGITRSASGIMRRAVASPPPFSEASK-------------------QQYLL------------------------------------------YDLTAVILHHGNERCGHFTAYRRASPSQ---------------------------------WFFVSDESVREASVAEVLSSCAYMLFYE 450
BLAST of NO05G00740 vs. NCBI_GenBank
Match: GAX12918.1 (ubiquitin carboxyl-terminal hydrolase 1 [Fistulifera solaris]) HSP 1 Score: 68.9 bits (167), Expect = 7.800e-8 Identity = 57/234 (24.36%), Postives = 91/234 (38.89%), Query Frame = 0 Query: 323 WLASVLQCVECGHRRP-----IQNSAFIDIALPLSFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNVKEAGLEGGMGSLMAKWEKDLQILTAERHRLQQLNPDEPFALPPSLPPFSSSFTKEGRPKEEGLRRQFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYGG 552 W+ S L+C C HRRP + S PS L L FA+ E V DVEC SCT + L+ Q ++ + + L + +L TA+ + ++PD+ L L + + P G KR++ +RLP +L +H+ RR + PS +M K + V+FP ++D+ + A+GG Sbjct: 370 WVGSALKCRTCQHRRPXXXXXXXXXXXXXXEVSQSLQPS----------------RVEKSFTNQHIPPCRLEECLAEFAAVEVVQDVECRSCTIQEKKTELLEDIIMFQQAMESQSSKRGSEDVHHL----QHELDQATAKLRAIYSIDPDDDAPLEDVLCSEEFYWYNDSIPIRRGTA---LKRMLLTRLPAVLTIHVQRRYYDPSTNRMTKTSQHVVFPEVLDVAPYCAHGG 580
BLAST of NO05G00740 vs. NCBI_GenBank
Match: GAX20671.1 (hypothetical protein FisN_32Hh060 [Fistulifera solaris]) HSP 1 Score: 68.6 bits (166), Expect = 1.000e-7 Identity = 57/234 (24.36%), Postives = 91/234 (38.89%), Query Frame = 0 Query: 323 WLASVLQCVECGHRRP-----IQNSAFIDIALPLSFSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSILHSFASAEHVLDVECWSCTHKSALQRLMSQTEKIQSSIHNVKEAGLEGGMGSLMAKWEKDLQILTAERHRLQQLNPDEPFALPPSLPPFSSSFTKEGRPKEEGLRRQFRKRLVFSRLPPLLCLHLGRRVFSPSLQKMLKVKEKVIFPLLMDMTGFAAYGG 552 W+ S L+C C HRRP + S PS L L FA+ E V DVEC SCT + LM Q ++ + + L +++L TA+ + ++PD+ L L + + P G KR++ +RLP +L +H+ RR + P +M K + V+FP ++D+ + A+GG Sbjct: 198 WVGSALKCRTCQHRRPXXXXXXXXXXXXXXEVSQSLQPS----------------RVEKSSTNQHTPPCRLEDCLAEFAAVEVVQDVECRSCTIQEKKTELMEDILMFQQAMESQSSKRGPEHLHHL----QQELDQATAKLRAIHSIDPDDDAPLEDVLCSEEFYWYNDSIPISRGTA---LKRMLLTRLPAVLTIHVQRRYYDPYTNRMTKTSQHVVFPEVLDVAPYCAHGG 408
BLAST of NO05G00740 vs. NCBI_GenBank
Match: KGL73132.1 (Ubiquitin carboxyl-terminal hydrolase 30, partial [Tinamus guttatus]) HSP 1 Score: 67.4 bits (163), Expect = 2.300e-7 Identity = 38/91 (41.76%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 663 YKYLLQAVIVHHGSADSGHYTAYRRLSPSPSPSTLLQTPSAEEERGGGRAGGNQDSLKVESNVWVHISDDAVAPATEEEVLESEAYLLFYQ 754 Y+Y L AV+VHHG SGH+ YRR PSP ++ L + SN W+ ISDD V A+ +EVL S AYLLFY+ Sbjct: 402 YRYRLMAVVVHHGDMHSGHFVTYRRSPPSP-----------------------KNPLSI-SNQWLWISDDTVRKASLQEVLSSSAYLLFYE 468
BLAST of NO05G00740 vs. NCBI_GenBank
Match: XP_010218942.1 (PREDICTED: ubiquitin carboxyl-terminal hydrolase 30 [Tinamus guttatus]) HSP 1 Score: 67.4 bits (163), Expect = 2.300e-7 Identity = 38/91 (41.76%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 663 YKYLLQAVIVHHGSADSGHYTAYRRLSPSPSPSTLLQTPSAEEERGGGRAGGNQDSLKVESNVWVHISDDAVAPATEEEVLESEAYLLFYQ 754 Y+Y L AV+VHHG SGH+ YRR PSP ++ L + SN W+ ISDD V A+ +EVL S AYLLFY+ Sbjct: 398 YRYRLMAVVVHHGDMHSGHFVTYRRSPPSP-----------------------KNPLSI-SNQWLWISDDTVRKASLQEVLSSSAYLLFYE 464 The following BLAST results are available for this feature:
BLAST of NO05G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00740 ID=NO05G00740|Name=NO05G00740|organism=Nannochloropsis oceanica|type=gene|length=3225bpback to top protein sequence of NO05G00740.1 >NO05G00740.1-protein ID=NO05G00740.1-protein|Name=NO05G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=793bpback to top Synonyms
Publications
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