NO05G00730, NO05G00730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00730 vs. NCBI_GenBank
Match: EWM28318.1 (Ribosomal protein S7, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 386.0 bits (990), Expect = 1.000e-103 Identity = 201/211 (95.26%), Postives = 204/211 (96.68%), Query Frame = 0 Query: 66 EAEAAVPFE-TDMAVGFEDNTADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 E + VP+E DMAV FEDN+ADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKL ANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR Sbjct: 5 EIDETVPYEPADMAVAFEDNSADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLTANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 215
BLAST of NO05G00730 vs. NCBI_GenBank
Match: CBJ48704.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 327.0 bits (837), Expect = 5.600e-86 Identity = 171/220 (77.73%), Postives = 192/220 (87.27%), Query Frame = 0 Query: 60 EIVPFDEAEAA---VPFETDMAVGFEDN-TADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 E V D+A A V E D + E++ +D++LF KW+ D+EI+D+SLEDYI V GK ATYLPHTAGRYQKKRFRKA CP+VERL +LMRKGRNSGKKLMA RIVKHTLEIIHLLTDQNPVQV+VD++IN+GPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YLITTGARESSFRNIKTIAE LADEIINAA+GSSNSYAIKKKDE+ERVAKANR Sbjct: 14 EPVVADDAGATDGWVETEVDAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 233
BLAST of NO05G00730 vs. NCBI_GenBank
Match: XP_008616084.1 (40S ribosomal protein S5 [Saprolegnia diclina VS20] >EQC30491.1 40S ribosomal protein S5 [Saprolegnia diclina VS20] >OQR97903.1 40S ribosomal protein S5-2 [Achlya hypogyna]) HSP 1 Score: 321.2 bits (822), Expect = 3.100e-84 Identity = 156/193 (80.83%), Postives = 180/193 (93.26%), Query Frame = 0 Query: 83 DNTADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 + A++KLF KW+ D+++ D++L DY+ V+GK AT+LPHTA RYQKKRFRKAQCP+VERLANSLMR GRNSGKKLMANRI++HTLEIIHLLTDQNP+QVVVD++INAGPREDSTRVGSAGVVRRQ VD+SPFRRVNQA+YL+TTGARE+SFRN+KTIAE LADE+INAAKGSSNSYAIKKKDEVERVAKANR Sbjct: 3 ETAAEVKLFNKWTYDDIKVNDVALIDYVAVSGKAATFLPHTAQRYQKKRFRKAQCPIVERLANSLMRHGRNSGKKLMANRIIRHTLEIIHLLTDQNPLQVVVDAVINAGPREDSTRVGSAGVVRRQGVDVSPFRRVNQALYLLTTGAREASFRNVKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 195
BLAST of NO05G00730 vs. NCBI_GenBank
Match: OQR83329.1 (40S ribosomal protein S5-2 [Thraustotheca clavata]) HSP 1 Score: 320.1 bits (819), Expect = 6.800e-84 Identity = 156/193 (80.83%), Postives = 179/193 (92.75%), Query Frame = 0 Query: 83 DNTADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 + A++KLF KW+ DV++ D++L DY+ V GK AT+LPHTA RYQKKRFRKAQCP+VERL+NSLMR GRNSGKKLMANRIV+HTLEIIHLLTDQNP+QVVVD++INAGPREDSTRVGSAGVVRRQ VD+SPFRRVNQA+YL+TTGARE+SFRN+KTIAE LADE++NAAKGSSNSYAIKKKDEVERVAKANR Sbjct: 3 ETAAEVKLFNKWTYDDVKVNDVALIDYVAVTGKAATFLPHTAQRYQKKRFRKAQCPIVERLSNSLMRHGRNSGKKLMANRIVRHTLEIIHLLTDQNPLQVVVDAVINAGPREDSTRVGSAGVVRRQGVDVSPFRRVNQALYLLTTGAREASFRNVKTIAECLADELVNAAKGSSNSYAIKKKDEVERVAKANR 195
BLAST of NO05G00730 vs. NCBI_GenBank
Match: XP_013467694.1 (40S ribosomal protein S5 [Medicago truncatula] >KEH41731.1 40S ribosomal protein S5-2 [Medicago truncatula]) HSP 1 Score: 312.0 bits (798), Expect = 1.900e-81 Identity = 160/240 (66.67%), Postives = 190/240 (79.17%), Query Frame = 0 Query: 36 LPLAIHQQPTAPTYQDETVVTMADEIVPFDEAEAAVPFETDMAVGFEDNTADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 +P ++H Q + + MAD I E +AV + N ++KLF +WS DV+I DLSL DYIG K ATY+PHTAGRY KKRFRKAQCP+VERL NSLM GRN+GKKLMA RI+KH +EIIHLLTDQNP+QV+VD+++N+GPRED+TR+GSAGVVRRQAVD+SP RRVNQAIYL+TTGARE++FRNIKTIAE LADE+INAAKGSSNSYAIKKKDE+ERVAKANR Sbjct: 12 IPYSLHSQQLQFGCRIHHIHAMADVI------------EEPVAVVSDPNLIEVKLFNRWSFDDVQITDLSLGDYIGARSKHATYVPHTAGRYSKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 239
BLAST of NO05G00730 vs. NCBI_GenBank
Match: XP_003062276.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH53095.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 311.6 bits (797), Expect = 2.400e-81 Identity = 153/190 (80.53%), Postives = 176/190 (92.63%), Query Frame = 0 Query: 86 ADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 ++IKLFGKW+ DVEI D+SLEDYIGV K A Y+PHTAGRY +KRFRKAQCP+VERL N+LM GRN+GKKLMA RIVKHT++IIHLL+DQNP+QV+VD+IINAGPRED+TRVGSAGV+RRQAVD+SP RRVNQAIYLITTGARE++FRN+KTIAE LADE+INAAKGSSNSYAIKKKDE+ERVAKANR Sbjct: 5 SEIKLFGKWTYDDVEINDISLEDYIGVKSKHAVYVPHTAGRYAQKRFRKAQCPIVERLVNALMMHGRNNGKKLMAVRIVKHTMDIIHLLSDQNPIQVIVDAIINAGPREDATRVGSAGVIRRQAVDISPLRRVNQAIYLITTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKANR 194
BLAST of NO05G00730 vs. NCBI_GenBank
Match: XP_002946634.1 (component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] >EFJ52561.1 component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis]) HSP 1 Score: 311.6 bits (797), Expect = 2.400e-81 Identity = 152/191 (79.58%), Postives = 174/191 (91.10%), Query Frame = 0 Query: 85 TADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 T D+KLFGKWS D+E++D+SLEDYI V K A Y+PHTAGRYQKKRFRKA CP+VERL NSLM GRN+GKKLMA RIVKH +IIHLLTDQNP+QV+VD+IIN+GPRED+TR+GSAGVVRRQAVD+SP RRVNQAIYL+TTGARE++FRNIKTIAE LADE++NAAKGSSNSYAIKKKDE+ERVAKANR Sbjct: 3 TPDVKLFGKWSFEDIEVQDISLEDYIAVKTKYAVYVPHTAGRYQKKRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVLVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193
BLAST of NO05G00730 vs. NCBI_GenBank
Match: EJK48143.1 (hypothetical protein THAOC_33085 [Thalassiosira oceanica]) HSP 1 Score: 311.2 bits (796), Expect = 3.200e-81 Identity = 156/199 (78.39%), Postives = 178/199 (89.45%), Query Frame = 0 Query: 77 MAVGFEDNTADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 +AVG ++KLFGKWS D+EI+D+SL DYI V G ATYLPHTAGRYQKKRFRKA CP+VERLA LMRKGRNSGKKLMA RIV+HTLEIIHLLTDQNPVQVVVD+IIN+GPREDSTRVG AGVVRRQAVDMSPFRRVN A+YL+ TGARE+SFRN+KT+AE LA+E++NAA+GSSNSYAIKKKDE+ERV+K+NR Sbjct: 29 VAVG---GATEVKLFGKWSFDDIEIRDISLVDYIAVKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNSGKKLMAVRIVQHTLEIIHLLTDQNPVQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELVNAARGSSNSYAIKKKDEIERVSKSNR 224
BLAST of NO05G00730 vs. NCBI_GenBank
Match: GAQ91161.1 (40S ribosomal protein S5 [Klebsormidium nitens]) HSP 1 Score: 310.8 bits (795), Expect = 4.100e-81 Identity = 153/189 (80.95%), Postives = 174/189 (92.06%), Query Frame = 0 Query: 87 DIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 ++KLFG+WS DV + D+SLEDYI V K AT++PHTAGRYQ KRFRKAQCP+VERL NSLM GRN+GKKLMA RIVKH++EIIHLLTDQNP+QVVVD+IIN+GPRED+TR+GSAGVVRRQAVD+SP RRVNQAIYL+TTGARES+FRNIKTIAE LADE+INAAKGSSNSYAIKKKDE+ERVAKANR Sbjct: 7 EVKLFGQWSFEDVAVSDISLEDYIAVKPKFATFVPHTAGRYQNKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHSMEIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 195
BLAST of NO05G00730 vs. NCBI_GenBank
Match: XP_002501578.1 (predicted protein [Micromonas commoda] >ACO62836.1 predicted protein [Micromonas commoda]) HSP 1 Score: 310.5 bits (794), Expect = 5.400e-81 Identity = 153/190 (80.53%), Postives = 174/190 (91.58%), Query Frame = 0 Query: 86 ADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLMANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 276 A+IKLFGKWS DVEI D+SLEDYIGV K A Y+PHTAGRY +KRFRKAQCP+ ERL N+LM GRN+GKKLMA RIVKH ++IIHLL+DQNP+QV+VD+IINAGPRED+TRVGSAGV+RRQAVD+SP RRVNQAIYLITTGARE++FRN+KTIAE LADE+INAAKGSSNSYAIKKKDE+ERVAKANR Sbjct: 6 AEIKLFGKWSYEDVEINDISLEDYIGVKSKHAVYVPHTAGRYAQKRFRKAQCPITERLVNALMMHGRNNGKKLMAVRIVKHAMDIIHLLSDQNPIQVIVDAIINAGPREDATRVGSAGVIRRQAVDISPLRRVNQAIYLITTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKANR 195 The following BLAST results are available for this feature:
BLAST of NO05G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00730 ID=NO05G00730|Name=NO05G00730|organism=Nannochloropsis oceanica|type=gene|length=1560bpback to top protein sequence of NO05G00730.1 >NO05G00730.1-protein ID=NO05G00730.1-protein|Name=NO05G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=276bpback to top Synonyms
Publications
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