NO05G00720, NO05G00720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00720 vs. NCBI_GenBank
Match: CDP00180.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 247.3 bits (630), Expect = 8.400e-62 Identity = 133/268 (49.63%), Postives = 185/268 (69.03%), Query Frame = 0 Query: 133 LDVVATLSKTRRYQEHLEKVKDAI----SIENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 LD V+ L KT+RY + ++KV+DA+ I N S+ LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MV+SVTAS+TSGKPLP +L + + CD L+L A+ VL +VE RM +APN A+VG+ +AA+LMG AGGL +L+++PA ++Q++G ++K L G + A H G L +++ S PP LR++A RL+A+K L R+D+ + + G Sbjct: 73 LDSVSKLHKTQRYNDIMQKVEDALEKGSDISN---QSIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVISVTASTTSGKPLPDEVLQKTIDACDRALTLDSAKKKVLDFVESRMGYIAPNVSAIVGTAVAAKLMGTAGGLSALAKMPACNVQLLGAKRKTLAGFSTANSQIHVGYLEQTEIFQSTPPTLRKRACRLLAAKSTLAARIDSIKGDSTG 337
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_016569560.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Capsicum annuum]) HSP 1 Score: 247.3 bits (630), Expect = 8.400e-62 Identity = 135/265 (50.94%), Postives = 184/265 (69.43%), Query Frame = 0 Query: 133 LDVVATLSKTRRYQEHLEKVKDAISIENP-PPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 LD V+ L K+RRY + ++KV+DA+ E+ V LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ VL +VE RM +APN A+VGS +AA+LMG AGGL SL+++PA ++Q++G ++K+L G + A H G + +++ S PP+LR +A RLVA+K L R+D+ + G Sbjct: 50 LDNVSKLQKSRRYIDIMQKVEDALERESDVTDKGVVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPVDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSSLAKMPACNVQLLGAKRKNLAGFSTATSQFHIGYIEQTELFQSTPPSLRMRACRLVAAKSTLAARVDSINGDPSG 314
BLAST of NO05G00720 vs. NCBI_GenBank
Match: PHT92768.1 (hypothetical protein T459_00650, partial [Capsicum annuum]) HSP 1 Score: 247.3 bits (630), Expect = 8.400e-62 Identity = 135/265 (50.94%), Postives = 184/265 (69.43%), Query Frame = 0 Query: 133 LDVVATLSKTRRYQEHLEKVKDAISIENP-PPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 LD V+ L K+RRY + ++KV+DA+ E+ V LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ VL +VE RM +APN A+VGS +AA+LMG AGGL SL+++PA ++Q++G ++K+L G + A H G + +++ S PP+LR +A RLVA+K L R+D+ + G Sbjct: 50 LDNVSKLQKSRRYIDIMQKVEDALERESDVTDKGVVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPVDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSSLAKMPACNVQLLGAKRKNLAGFSTATSQFHIGYIEQTELFQSTPPSLRMRACRLVAAKSTLAARVDSINGDPSG 314
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_024539451.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2 [Selaginella moellendorffii] >EFJ20298.1 hypothetical protein SELMODRAFT_152874 [Selaginella moellendorffii] >EFJ23294.1 hypothetical protein SELMODRAFT_150610 [Selaginella moellendorffii]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 131/257 (50.97%), Postives = 180/257 (70.04%), Query Frame = 0 Query: 133 LDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 L+ VA L T RY + ++KV +AI P M+ E DPEYQLIV N L DID EI +H ++ D Y LKFPELESLV + +DY R V++IGNEMDLT+VDL +LPSAT+MVVSVTAS+T+GKPL +L + L CD L L E++ VL++VE RM+ +APN A++GS +AA+LMG AGGL +LS++PA ++Q++G +KK+ G ++A PH G + S++V +PP+LR +A RLV+ K L R+DA Sbjct: 11 LNTVAKLQNTPRYHDLMKKVDEAIESGVPATMAKLSEDDPEYQLIVECNTLSVDIDNEIGVIHNYIRDKYRLKFPELESLVQHPIDYARVVKRIGNEMDLTLVDLEGVLPSATIMVVSVTASTTNGKPLAEEVLQKTLDACDRALDLDESKKKVLNFVESRMAFIAPNLSAILGSAVAAKLMGTAGGLSALSKMPACNVQILGVKKKNSAGFSSATLNPHTGFIFHSEIVQGSPPSLRTRAARLVSGKSTLAARVDA 267
BLAST of NO05G00720 vs. NCBI_GenBank
Match: CCA22653.1 (U4/U6 small nuclear ribonucleoprotein Prp31 putativ [Albugo laibachii Nc14]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 126/257 (49.03%), Postives = 182/257 (70.82%), Query Frame = 0 Query: 136 VATLSKTRRYQEHLEKVKDAISIENPPPMSVPLESD-PEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQ 392 +A+L ++ +Y +H+ ++D +S N + ++ D EY L+V+SN L+ ID+EI +HRF+V++Y+ KFPEL+SLVPN LDY R V++IGNE D+T+VDL LLPSATVM VSVT S+TSGKPL P L C+ GC + L + + ++L +VE RM LAPN LVG++IAAQL+GLAGG++ LSRIP+ ++QV+GQ+KK L G ++A + H G++ D++ + PP LR KA R +A K AL R+D+ Q Sbjct: 68 IASLKRSEKYLKHIHTIRDHLSDANEQFQAHSMQKDSEEYHLVVTSNDLMVQIDDEIAAIHRFLVEMYAPKFPELDSLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLSPDTLEICIEGCRELFDLEKDKVMILEFVESRMRFLAPNVAQLVGTRIAAQLVGLAGGILELSRIPSCNLQVLGQQKKVLSGFSSAAALRHTGIIFHCDLIQNVPPYLRIKACRALAGKLALCARVDSEQ 324
BLAST of NO05G00720 vs. NCBI_GenBank
Match: ETK77817.1 (hypothetical protein L915_15983 [Phytophthora parasitica] >ETL31250.1 hypothetical protein L916_15879 [Phytophthora parasitica]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 133/272 (48.90%), Postives = 188/272 (69.12%), Query Frame = 0 Query: 122 EKALPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPL---ESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIV-DLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 E +K + + VVATL ++ +Y H++K+++ + +++ + P E EY+L+V+SN L+ ID+EI +HRF+ D+Y+ KFPEL+SLVPN LDY R V+ IGNEMDLT+V +L LLPS+ V+ +SVT S TSGKPL L C+ CD +LSL + ++++L +VE RM LAPN LVG++IAAQL+GLAGG+ L+RIP+ ++QV+GQEKK L G ++A + H GVL SD+V S PP LR KA R VA K AL R+D+ Sbjct: 77 ESLRSSVKQRGIAVVATLKRSPKYLAHVQKIQEYVDVDDASVTAEPKPLEEGSAEYELVVTSNDLMVQIDDEIEAIHRFIADIYAAKFPELDSLVPNALDYARVVKVIGNEMDLTLVEELPKLLPSSAVIGISVTGSGTSGKPLSLEDLKTCMEACDELLSLDKDKNMILRFVESRMKYLAPNVSQLVGTRIAAQLIGLAGGVAQLARIPSCNLQVLGQEKKVLSGFSSAAALKHTGVLFFSDLVQSVPPYLRMKACRAVAGKLALMARVDS 348
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_008446223.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 131/266 (49.25%), Postives = 185/266 (69.55%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIE-NPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 L L + LD V+ L KT+RY + ++KV+DA+ + N LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNE+DLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ +VL++VE RM +APN A+VGS +AA+LMG AGGLV+L+++PA ++Q++G +KK+L G + A G + +++ S PP L+ +A RL+++K L R+D+ Sbjct: 43 LESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKSTLAARVDS 308
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_016900273.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Cucumis melo]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 131/266 (49.25%), Postives = 185/266 (69.55%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIE-NPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 L L + LD V+ L KT+RY + ++KV+DA+ + N LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNE+DLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ +VL++VE RM +APN A+VGS +AA+LMG AGGLV+L+++PA ++Q++G +KK+L G + A G + +++ S PP L+ +A RL+++K L R+D+ Sbjct: 12 LESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKSTLAARVDS 277
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_009594918.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Nicotiana tomentosiformis]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 137/273 (50.18%), Postives = 186/273 (68.13%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIENP-PPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 L L LD V+ L K+RRY + ++KV+DA+ E+ + LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ VL +VE RM +APN A+VGS +AA+LMG AGGL SL+++PA ++Q++G +KK L G + A H G + ++ SAPP+LR +A+RL+A+K L R+D+ + G Sbjct: 42 LEALNYDDLDNVSKLQKSRRYIDIMQKVEDALEKESDVTNRGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSSLAKMPACNVQLLGAKKKTLAGFSTATSQFHVGYIEQTETFQSAPPSLRMRAVRLLAAKSTLAARVDSISGDPTG 314
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_009594919.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 246.9 bits (629), Expect = 1.100e-61 Identity = 137/273 (50.18%), Postives = 186/273 (68.13%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIENP-PPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 L L LD V+ L K+RRY + ++KV+DA+ E+ + LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ VL +VE RM +APN A+VGS +AA+LMG AGGL SL+++PA ++Q++G +KK L G + A H G + ++ SAPP+LR +A+RL+A+K L R+D+ + G Sbjct: 10 LEALNYDDLDNVSKLQKSRRYIDIMQKVEDALEKESDVTNRGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSSLAKMPACNVQLLGAKKKTLAGFSTATSQFHVGYIEQTETFQSAPPSLRMRAVRLLAAKSTLAARVDSISGDPTG 282 The following BLAST results are available for this feature:
BLAST of NO05G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00720 ID=NO05G00720|Name=NO05G00720|organism=Nannochloropsis oceanica|type=gene|length=4359bpback to top protein sequence of NO05G00720.1 >NO05G00720.1-protein ID=NO05G00720.1-protein|Name=NO05G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bpback to top Synonyms
Publications
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